BLASTX nr result

ID: Rehmannia32_contig00023501 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00023501
         (452 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012848542.1| PREDICTED: pre-mRNA-splicing factor CWC22-li...   102   1e-23
ref|XP_011096444.1| uncharacterized protein LOC105175639 [Sesamu...    86   4e-17
gb|PIN19749.1| hypothetical protein CDL12_07573 [Handroanthus im...    73   2e-12
gb|PIM98926.1| hypothetical protein CDL12_28584 [Handroanthus im...    73   2e-12
ref|XP_022893727.1| uncharacterized protein LOC111408157 [Olea e...    57   8e-07

>ref|XP_012848542.1| PREDICTED: pre-mRNA-splicing factor CWC22-like [Erythranthe
           guttata]
 gb|EYU27952.1| hypothetical protein MIMGU_mgv1a023911mg [Erythranthe guttata]
          Length = 281

 Score =  102 bits (255), Expect = 1e-23
 Identities = 60/101 (59%), Positives = 70/101 (69%)
 Frame = +3

Query: 15  NRKIESPFIKSAPLLHDKVPRNGVVWKKPLTAFGGGDDPSEEVSEICSTLGDXXXXXXXX 194
           +R+ ESPFIKS+PLL D   RNG V KKP  A+GGG+D SEEVSEICSTLG+        
Sbjct: 75  HRRSESPFIKSSPLLSD-YSRNGAVCKKPFAAYGGGEDLSEEVSEICSTLGE--SEGVSV 131

Query: 195 XXXXXXKRENDVELREQHRQRSPARRKNTSFSGEVRRDKIV 317
                 KR+N+ ELRE  RQRSPAR KN  FSGEV+R+K V
Sbjct: 132 STTMTEKRDNNDELREL-RQRSPARLKNRPFSGEVKREKTV 171


>ref|XP_011096444.1| uncharacterized protein LOC105175639 [Sesamum indicum]
          Length = 276

 Score = 85.5 bits (210), Expect = 4e-17
 Identities = 59/110 (53%), Positives = 66/110 (60%), Gaps = 7/110 (6%)
 Frame = +3

Query: 9   QRNRKIESPFIKSAPLL-------HDKVPRNGVVWKKPLTAFGGGDDPSEEVSEICSTLG 167
           Q NR+ ESPFIK+APLL       HDK   NG   KKP  AF   +D SEEVSEICST  
Sbjct: 67  QENRQHESPFIKAAPLLPDFSRNAHDKKHPNGGACKKPFMAFSN-EDLSEEVSEICSTHS 125

Query: 168 DXXXXXXXXXXXXXXKRENDVELREQHRQRSPARRKNTSFSGEVRRDKIV 317
           +              KREND ELRE  RQRSPAR +N S SGEV++DK V
Sbjct: 126 ESVSISTTITE----KREND-ELREL-RQRSPARYRNRSISGEVKKDKTV 169


>gb|PIN19749.1| hypothetical protein CDL12_07573 [Handroanthus impetiginosus]
          Length = 287

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 50/110 (45%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
 Frame = +3

Query: 9   QRNRKIESPFIKSAPLLHD-------KVPRNGVVWKKPLTAFGGGDDPSEEVSEICSTLG 167
           Q + + ESPFI++APLL D       K  +NG V KK    +   DD SE+VSEICSTL 
Sbjct: 69  QESHQNESPFIRAAPLLPDFGRIGREKKYQNGGVGKKQFVGYSN-DDLSEDVSEICSTLS 127

Query: 168 DXXXXXXXXXXXXXXKRENDVELREQHRQRSPARRKNTSFSGEVRRDKIV 317
           +                E + ELRE  RQRSPAR K  SFSGE +R+K V
Sbjct: 128 ESISVSTTVTEKRENNGEQNHELRE-FRQRSPARVKKGSFSGEGKREKTV 176


>gb|PIM98926.1| hypothetical protein CDL12_28584 [Handroanthus impetiginosus]
          Length = 287

 Score = 73.2 bits (178), Expect = 2e-12
 Identities = 50/110 (45%), Positives = 61/110 (55%), Gaps = 7/110 (6%)
 Frame = +3

Query: 9   QRNRKIESPFIKSAPLLHD-------KVPRNGVVWKKPLTAFGGGDDPSEEVSEICSTLG 167
           Q + + ESPFI++APLL D       K  +NG V KK    +   DD SE+VSEICSTL 
Sbjct: 69  QESHQNESPFIRAAPLLPDFGRIGREKKYQNGGVGKKQFVGYSN-DDLSEDVSEICSTLS 127

Query: 168 DXXXXXXXXXXXXXXKRENDVELREQHRQRSPARRKNTSFSGEVRRDKIV 317
           +                E + ELRE  RQRSPAR K  SFSGE +R+K V
Sbjct: 128 ESISVSTTVTEKRENNGEQNHELRE-FRQRSPARVKKGSFSGEGKREKTV 176


>ref|XP_022893727.1| uncharacterized protein LOC111408157 [Olea europaea var.
           sylvestris]
          Length = 278

 Score = 57.4 bits (137), Expect = 8e-07
 Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
 Frame = +3

Query: 9   QRNRKIESPFIKSAPLLHD--KVP----RNGVVWKKPLTAFGGGDDPSEEVSEICSTLGD 170
           Q N++ + PFIKS+PLL D  ++P    +N  V KKP   F   D+ SEE SEICST+ +
Sbjct: 53  QENQQNKVPFIKSSPLLPDFPEIPDEKKQNDGVLKKPFVDF-NNDEASEEFSEICSTISE 111

Query: 171 XXXXXXXXXXXXXXKRENDVELREQHRQRSPARRKNTSFSGEVRRDKIV 317
                         KREN+ E     RQ +  + KN S SGE+ R+K++
Sbjct: 112 ----SVSVSTSVTEKRENN-ENVNAFRQSALPKFKNRSLSGEMTREKMM 155


Top