BLASTX nr result
ID: Rehmannia32_contig00023440
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00023440
(492 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011094009.1| DNA-directed RNA polymerase III subunit RPC4... 144 2e-39
ref|XP_012851133.1| PREDICTED: DNA-directed RNA polymerase III s... 124 8e-32
ref|XP_015158664.1| PREDICTED: uncharacterized protein LOC102600... 119 4e-30
ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600... 119 5e-30
ref|XP_015158663.1| PREDICTED: uncharacterized protein LOC102600... 119 6e-30
ref|XP_019246675.1| PREDICTED: uncharacterized protein LOC109226... 119 6e-30
ref|XP_010321122.1| PREDICTED: uncharacterized protein LOC101251... 117 1e-29
ref|XP_016509974.1| PREDICTED: uncharacterized protein LOC107827... 118 2e-29
ref|XP_010321121.1| PREDICTED: uncharacterized protein LOC101251... 117 3e-29
ref|XP_009631588.1| PREDICTED: uncharacterized protein LOC104121... 117 3e-29
ref|XP_016549818.1| PREDICTED: DNA-directed RNA polymerase III s... 117 6e-29
gb|PHT99494.1| hypothetical protein BC332_29282 [Capsicum chinense] 117 7e-29
ref|XP_015075051.1| PREDICTED: uncharacterized protein LOC107018... 115 2e-28
gb|PHT64570.1| hypothetical protein T459_28995 [Capsicum annuum] 115 2e-28
gb|PKI38980.1| hypothetical protein CRG98_040632 [Punica granatum] 103 7e-24
gb|OWM77297.1| hypothetical protein CDL15_Pgr028934 [Punica gran... 103 2e-23
ref|XP_019151097.1| PREDICTED: DNA-directed RNA polymerase III s... 101 5e-23
ref|XP_010656128.1| PREDICTED: uncharacterized protein LOC100256... 99 8e-22
ref|XP_010049526.1| PREDICTED: DNA-directed RNA polymerase III s... 95 3e-20
ref|XP_010049527.1| PREDICTED: DNA-directed RNA polymerase III s... 93 1e-19
>ref|XP_011094009.1| DNA-directed RNA polymerase III subunit RPC4 [Sesamum indicum]
Length = 299
Score = 144 bits (364), Expect = 2e-39
Identities = 76/97 (78%), Positives = 80/97 (82%), Gaps = 1/97 (1%)
Frame = +3
Query: 105 STTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGKPKVER 284
STT APRKVRFAPKAPPKREQKPVLPK EKVE+D + A AEQLLRR NE SLKGKPKVER
Sbjct: 10 STTNAPRKVRFAPKAPPKREQKPVLPKAEKVESDLEEAKAEQLLRRLNEASLKGKPKVER 69
Query: 285 KVGPTQVAFGCGGSSTPLRSYGSHK-ANKNQGSSADG 392
K GPTQVAFG GGSS LRSYG K N+ GSS+DG
Sbjct: 70 KAGPTQVAFGYGGSSNSLRSYGVKKNINRIPGSSSDG 106
>ref|XP_012851133.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4-like
[Erythranthe guttata]
Length = 294
Score = 124 bits (312), Expect = 8e-32
Identities = 67/104 (64%), Positives = 76/104 (73%), Gaps = 2/104 (1%)
Frame = +3
Query: 96 DQDSTTKA-PRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGKP 272
D S+TKA PRKV+FAPK P +R +KPVLPKVEKVE D AE+L+RRYNE+S+ K
Sbjct: 4 DWGSSTKAVPRKVKFAPKVPSQRRKKPVLPKVEKVEEVEDDIKAEELMRRYNESSMNRKT 63
Query: 273 KVERKVGPTQVAFGCGGSSTPLRSYGSHKA-NKNQGSSADGKCI 401
K ERKV P QVAFG GGSS LRSYG+HK KN GSS DG I
Sbjct: 64 KAERKVAPVQVAFGFGGSSNALRSYGAHKGIKKNLGSSNDGTAI 107
>ref|XP_015158664.1| PREDICTED: uncharacterized protein LOC102600766 isoform X3 [Solanum
tuberosum]
Length = 273
Score = 119 bits (299), Expect = 4e-30
Identities = 66/101 (65%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Frame = +3
Query: 93 MDQDS-TTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGK 269
MD DS TKAPRKVRFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K K
Sbjct: 1 MDSDSFATKAPRKVRFAPKGPPRRAQKTVLPKPENVEADGDAAKAEELMQRFNEASAKVK 60
Query: 270 PKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSSADG 392
KVE+K GPTQVAFG GGSS+ L+SYG + NK GS +DG
Sbjct: 61 HKVEKK-GPTQVAFGYGGSSSSLKSYGHY--NKVSGSMSDG 98
>ref|XP_006362806.1| PREDICTED: uncharacterized protein LOC102600766 isoform X2 [Solanum
tuberosum]
Length = 283
Score = 119 bits (299), Expect = 5e-30
Identities = 66/101 (65%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Frame = +3
Query: 93 MDQDS-TTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGK 269
MD DS TKAPRKVRFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K K
Sbjct: 1 MDSDSFATKAPRKVRFAPKGPPRRAQKTVLPKPENVEADGDAAKAEELMQRFNEASAKVK 60
Query: 270 PKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSSADG 392
KVE+K GPTQVAFG GGSS+ L+SYG + NK GS +DG
Sbjct: 61 HKVEKK-GPTQVAFGYGGSSSSLKSYGHY--NKVSGSMSDG 98
>ref|XP_015158663.1| PREDICTED: uncharacterized protein LOC102600766 isoform X1 [Solanum
tuberosum]
Length = 286
Score = 119 bits (299), Expect = 6e-30
Identities = 66/101 (65%), Positives = 76/101 (75%), Gaps = 1/101 (0%)
Frame = +3
Query: 93 MDQDS-TTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGK 269
MD DS TKAPRKVRFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K K
Sbjct: 1 MDSDSFATKAPRKVRFAPKGPPRRAQKTVLPKPENVEADGDAAKAEELMQRFNEASAKVK 60
Query: 270 PKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSSADG 392
KVE+K GPTQVAFG GGSS+ L+SYG + NK GS +DG
Sbjct: 61 HKVEKK-GPTQVAFGYGGSSSSLKSYGHY--NKVSGSMSDG 98
>ref|XP_019246675.1| PREDICTED: uncharacterized protein LOC109226346 [Nicotiana
attenuata]
ref|XP_019246676.1| PREDICTED: uncharacterized protein LOC109226346 [Nicotiana
attenuata]
gb|OIT03545.1| hypothetical protein A4A49_17262 [Nicotiana attenuata]
Length = 287
Score = 119 bits (299), Expect = 6e-30
Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 4/104 (3%)
Frame = +3
Query: 93 MDQD----STTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSL 260
MD D +TTKAPRKVRFAPK PP+R QK VLPK E +E D D A AE+L++R+NE S
Sbjct: 1 MDSDPLASNTTKAPRKVRFAPKGPPRRAQKTVLPKPENIEEDVDAAKAEELMQRFNEVSA 60
Query: 261 KGKPKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSSADG 392
K KPK E+K GPTQVAFG GGSS+ L+SYG K +K SS G
Sbjct: 61 KVKPKAEKK-GPTQVAFGYGGSSSALKSYGPLKGHKKFDSSIGG 103
>ref|XP_010321122.1| PREDICTED: uncharacterized protein LOC101251183 isoform X2 [Solanum
lycopersicum]
Length = 233
Score = 117 bits (294), Expect = 1e-29
Identities = 65/102 (63%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = +3
Query: 90 LMDQDS-TTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKG 266
+MD DS TKAPRKVRFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K
Sbjct: 1 MMDSDSFATKAPRKVRFAPKGPPRRAQKTVLPKTENVEADVDAAKAEELMQRFNEASAKI 60
Query: 267 KPKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSSADG 392
K KVE+K GPTQVAFG GGSS+ L+SYG + K GS +DG
Sbjct: 61 KHKVEKK-GPTQVAFGYGGSSSSLKSYGHY--TKVSGSMSDG 99
>ref|XP_016509974.1| PREDICTED: uncharacterized protein LOC107827370 [Nicotiana tabacum]
ref|XP_016509982.1| PREDICTED: uncharacterized protein LOC107827370 [Nicotiana tabacum]
ref|XP_016509989.1| PREDICTED: uncharacterized protein LOC107827370 [Nicotiana tabacum]
Length = 289
Score = 118 bits (296), Expect = 2e-29
Identities = 63/101 (62%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Frame = +3
Query: 93 MDQD----STTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSL 260
MD D +TTKAPRKVRFAPK PP+R QK VLPK E +E D D A AE+L++R+NE S
Sbjct: 1 MDSDPLASNTTKAPRKVRFAPKGPPRRAQKTVLPKPENIEEDVDAAKAEELMQRFNEVSA 60
Query: 261 KGKPKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSS 383
K KPK E+K GPTQVAFG GGSS+ L+SYG K +K SS
Sbjct: 61 KVKPKTEKK-GPTQVAFGYGGSSSALKSYGPLKGHKKVDSS 100
>ref|XP_010321121.1| PREDICTED: uncharacterized protein LOC101251183 isoform X1 [Solanum
lycopersicum]
Length = 284
Score = 117 bits (294), Expect = 3e-29
Identities = 65/102 (63%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = +3
Query: 90 LMDQDS-TTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKG 266
+MD DS TKAPRKVRFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K
Sbjct: 1 MMDSDSFATKAPRKVRFAPKGPPRRAQKTVLPKTENVEADVDAAKAEELMQRFNEASAKI 60
Query: 267 KPKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSSADG 392
K KVE+K GPTQVAFG GGSS+ L+SYG + K GS +DG
Sbjct: 61 KHKVEKK-GPTQVAFGYGGSSSSLKSYGHY--TKVSGSMSDG 99
>ref|XP_009631588.1| PREDICTED: uncharacterized protein LOC104121328 [Nicotiana
tomentosiformis]
ref|XP_009631589.1| PREDICTED: uncharacterized protein LOC104121328 [Nicotiana
tomentosiformis]
ref|XP_009631590.1| PREDICTED: uncharacterized protein LOC104121328 [Nicotiana
tomentosiformis]
ref|XP_018622104.1| PREDICTED: uncharacterized protein LOC104121328 [Nicotiana
tomentosiformis]
Length = 289
Score = 117 bits (294), Expect = 3e-29
Identities = 63/101 (62%), Positives = 74/101 (73%), Gaps = 4/101 (3%)
Frame = +3
Query: 93 MDQD----STTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSL 260
MD D +TTKAPRKVRFAPK PP+R QK VLPK E +E D D A AE+L++R+NE S
Sbjct: 1 MDSDPLASNTTKAPRKVRFAPKGPPRRAQKIVLPKPENIEEDVDAAKAEELMQRFNEVSA 60
Query: 261 KGKPKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSS 383
K KPK E+K GPTQVAFG GGSS+ L+SYG K +K SS
Sbjct: 61 KVKPKTEKK-GPTQVAFGYGGSSSALKSYGPLKGHKKVDSS 100
>ref|XP_016549818.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 [Capsicum
annuum]
Length = 287
Score = 117 bits (292), Expect = 6e-29
Identities = 65/102 (63%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Frame = +3
Query: 93 MDQDSTT-KAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGK 269
MD DS KAPRKVRFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K K
Sbjct: 1 MDSDSLAPKAPRKVRFAPKGPPRRAQKTVLPKPENVEADIDAAKAEELMKRFNEASTKVK 60
Query: 270 PKVERKVGPTQVAFGCGGSSTPLRSYGSHKA-NKNQGSSADG 392
KVE+K GPTQVAFG GGSS+ ++SYG K NK GS +DG
Sbjct: 61 SKVEKK-GPTQVAFGYGGSSSSVKSYGPFKGHNKVAGSMSDG 101
>gb|PHT99494.1| hypothetical protein BC332_29282 [Capsicum chinense]
Length = 291
Score = 117 bits (292), Expect = 7e-29
Identities = 65/102 (63%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Frame = +3
Query: 93 MDQDSTT-KAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGK 269
MD DS KAPRKVRFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K K
Sbjct: 1 MDSDSLAPKAPRKVRFAPKGPPRRAQKTVLPKPENVEADIDAAKAEELMKRFNEASTKVK 60
Query: 270 PKVERKVGPTQVAFGCGGSSTPLRSYGSHKA-NKNQGSSADG 392
KVE+K GPTQVAFG GGSS+ ++SYG K NK GS +DG
Sbjct: 61 SKVEKK-GPTQVAFGYGGSSSSVKSYGPFKGHNKVAGSMSDG 101
>ref|XP_015075051.1| PREDICTED: uncharacterized protein LOC107018972 [Solanum pennellii]
Length = 284
Score = 115 bits (289), Expect = 2e-28
Identities = 64/102 (62%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Frame = +3
Query: 90 LMDQDS-TTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKG 266
+MD DS TKAPRK+RFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K
Sbjct: 1 MMDSDSFATKAPRKMRFAPKGPPRRAQKTVLPKPENVEADVDAAKAEELMQRFNEASAKI 60
Query: 267 KPKVERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSSADG 392
K KVE+K GPTQVAFG GGSS+ L+SYG + K GS +DG
Sbjct: 61 KHKVEKK-GPTQVAFGYGGSSSSLKSYGHY--TKVSGSMSDG 99
>gb|PHT64570.1| hypothetical protein T459_28995 [Capsicum annuum]
Length = 287
Score = 115 bits (289), Expect = 2e-28
Identities = 64/102 (62%), Positives = 75/102 (73%), Gaps = 2/102 (1%)
Frame = +3
Query: 93 MDQDSTT-KAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGK 269
MD DS KAPRKVRFAPK PP+R QK VLPK E VE D D A AE+L++R+NE S K K
Sbjct: 1 MDSDSLAPKAPRKVRFAPKGPPRRAQKTVLPKPENVEADIDAAKAEELMKRFNEASTKVK 60
Query: 270 PKVERKVGPTQVAFGCGGSSTPLRSYGSHKA-NKNQGSSADG 392
KVE+K GPTQVAFG GGSS+ ++SYG K NK G+ +DG
Sbjct: 61 SKVEKK-GPTQVAFGYGGSSSSVKSYGPFKGHNKVAGAMSDG 101
>gb|PKI38980.1| hypothetical protein CRG98_040632 [Punica granatum]
Length = 292
Score = 103 bits (258), Expect = 7e-24
Identities = 52/92 (56%), Positives = 66/92 (71%), Gaps = 4/92 (4%)
Frame = +3
Query: 117 APRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGKPKVERKVGP 296
APRKVRFAPKAPP R+ KP K+E ++D D + A+ LLRR+NE LKGK KVERKV P
Sbjct: 12 APRKVRFAPKAPPTRKPKPAAVKIEVKDDDDDDSKAKDLLRRFNEGILKGKAKVERKVAP 71
Query: 297 TQVAFGCGGSSTPLRSYGSH----KANKNQGS 380
+Q+AFG GG+ T ++SYG+ N +QGS
Sbjct: 72 SQIAFGYGGAVTSIKSYGTRSKASNGNNHQGS 103
>gb|OWM77297.1| hypothetical protein CDL15_Pgr028934 [Punica granatum]
Length = 321
Score = 103 bits (256), Expect = 2e-23
Identities = 52/92 (56%), Positives = 66/92 (71%)
Frame = +3
Query: 117 APRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGKPKVERKVGP 296
APRKVRFAPKAPP R+ KP K+E ++D D + A+ LLRR+NE LKGK KVERKV P
Sbjct: 46 APRKVRFAPKAPPTRKPKPAAVKIEVKDDDDDDSKAKDLLRRFNEGILKGKAKVERKVAP 105
Query: 297 TQVAFGCGGSSTPLRSYGSHKANKNQGSSADG 392
+Q+AFG GG+ T ++SYG+ +K S DG
Sbjct: 106 SQIAFGYGGAVTSIKSYGTR--SKASNGSFDG 135
>ref|XP_019151097.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 [Ipomoea
nil]
Length = 291
Score = 101 bits (252), Expect = 5e-23
Identities = 60/98 (61%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Frame = +3
Query: 105 STTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETS-LKGKPKVE 281
S RKVRFAPK PP+R QKP LPK EKVE D+D AE+LLRR+NE+S ++ K KVE
Sbjct: 12 SANTGTRKVRFAPKGPPRRAQKPALPKAEKVEEDADATKAEELLRRFNESSAMRAKFKVE 71
Query: 282 RKVGPTQVAFGCGGSSTPLRSYGSHK-ANKNQGSSADG 392
+K GPT+VAFG GGSS RSY K A K Q SS+DG
Sbjct: 72 KK-GPTRVAFGQGGSS---RSYIPPKGAKKPQSSSSDG 105
>ref|XP_010656128.1| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
Length = 315
Score = 99.0 bits (245), Expect = 8e-22
Identities = 52/97 (53%), Positives = 67/97 (69%)
Frame = +3
Query: 99 QDSTTKAPRKVRFAPKAPPKREQKPVLPKVEKVENDSDGAIAEQLLRRYNETSLKGKPKV 278
++ST A RKVRFAPKAP +R K V+PK E E+D D A A +L+R +NE S+KGKPK
Sbjct: 7 KNSTAAATRKVRFAPKAP-RRVPKSVVPKSEVAEDD-DAAQANELMRHFNEASMKGKPKA 64
Query: 279 ERKVGPTQVAFGCGGSSTPLRSYGSHKANKNQGSSAD 389
E+K+ PTQVAFG GG+S +RSYG+ + N D
Sbjct: 65 EKKLAPTQVAFGYGGASASIRSYGTPRGATNSSRYQD 101
>ref|XP_010049526.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X1
[Eucalyptus grandis]
Length = 304
Score = 94.7 bits (234), Expect = 3e-20
Identities = 50/90 (55%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Frame = +3
Query: 117 APRKVRFAPKAPPKREQKPVLPKVEKVENDSDG--AIAEQLLRRYNETSLKGKPKVERKV 290
APRKVRFAPKAPP R+ KP K E ++D D A A+ LLR +NE LK KPK+ERKV
Sbjct: 12 APRKVRFAPKAPPVRKPKPAAVKTEARDDDDDDDEAKAKDLLRHFNEGILKEKPKIERKV 71
Query: 291 GPTQVAFGCGGSSTPLRSYGSHKANKNQGS 380
P+Q+AFG GG+S L+SY K N S
Sbjct: 72 APSQIAFGYGGTSASLKSYHVQKDQNNVNS 101
>ref|XP_010049527.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X2
[Eucalyptus grandis]
gb|KCW82159.1| hypothetical protein EUGRSUZ_C03553 [Eucalyptus grandis]
gb|KCW82160.1| hypothetical protein EUGRSUZ_C03553 [Eucalyptus grandis]
Length = 304
Score = 93.2 bits (230), Expect = 1e-19
Identities = 49/89 (55%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = +3
Query: 120 PRKVRFAPKAPPKREQKPVLPKVEKVENDSDG--AIAEQLLRRYNETSLKGKPKVERKVG 293
PRKVRFAPKAPP R+ KP K E ++D D A A+ LLR +NE LK KPK+ERKV
Sbjct: 13 PRKVRFAPKAPPVRKPKPAAVKTEARDDDDDDDEAKAKDLLRHFNEGILKEKPKIERKVA 72
Query: 294 PTQVAFGCGGSSTPLRSYGSHKANKNQGS 380
P+Q+AFG GG+S L+SY K N S
Sbjct: 73 PSQIAFGYGGTSASLKSYHVQKDQNNVNS 101