BLASTX nr result

ID: Rehmannia32_contig00023410 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00023410
         (642 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020549038.1| methyl-CpG-binding domain-containing protein...   129   4e-31
ref|XP_020549037.1| methyl-CpG-binding domain-containing protein...   129   8e-31
gb|PIN11005.1| Methyl-CpG binding transcription regulator [Handr...   124   4e-29
ref|XP_011084407.1| methyl-CpG-binding domain-containing protein...    99   2e-20
dbj|GAV72511.1| MBD domain-containing protein [Cephalotus follic...    59   1e-06
ref|XP_003549104.1| PREDICTED: methyl-CpG-binding domain-contain...    59   2e-06
gb|KHN31504.1| Methyl-CpG-binding domain-containing protein 13 [...    59   2e-06
ref|XP_014624690.1| PREDICTED: uncharacterized protein LOC100778...    59   2e-06
ref|XP_022140862.1| methyl-CpG-binding domain-containing protein...    57   6e-06
ref|XP_022140861.1| methyl-CpG-binding domain-containing protein...    57   6e-06
ref|XP_022140860.1| methyl-CpG-binding domain-containing protein...    57   6e-06
ref|XP_022140859.1| methyl-CpG-binding domain-containing protein...    57   6e-06

>ref|XP_020549038.1| methyl-CpG-binding domain-containing protein 13 isoform X2 [Sesamum
           indicum]
          Length = 546

 Score =  129 bits (323), Expect = 4e-31
 Identities = 72/115 (62%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
 Frame = +2

Query: 65  GDILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYP 244
           GDI ADPCFEFAVKMLT E P ED +++++SFQQP +GSS   GCNS T+P F  DNVYP
Sbjct: 438 GDIWADPCFEFAVKMLTSETPAEDGTQWRVSFQQP-LGSSGVGGCNSLTAPEFRLDNVYP 496

Query: 245 SIY-SVSQFDAVKKPSMRQQGVRDPPFPQAINGSSLNSVGTGLHHGVEGQKGKFM 406
           S+Y SV Q +AVKKP MRQQG+RD P P   +G S N V  GL +GVEG+K  FM
Sbjct: 497 SVYSSVGQPNAVKKPYMRQQGMRDCPPP---HGGSQNFV--GLRNGVEGRKQNFM 546


>ref|XP_020549037.1| methyl-CpG-binding domain-containing protein 13 isoform X1 [Sesamum
           indicum]
          Length = 654

 Score =  129 bits (323), Expect = 8e-31
 Identities = 72/115 (62%), Positives = 85/115 (73%), Gaps = 1/115 (0%)
 Frame = +2

Query: 65  GDILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYP 244
           GDI ADPCFEFAVKMLT E P ED +++++SFQQP +GSS   GCNS T+P F  DNVYP
Sbjct: 546 GDIWADPCFEFAVKMLTSETPAEDGTQWRVSFQQP-LGSSGVGGCNSLTAPEFRLDNVYP 604

Query: 245 SIY-SVSQFDAVKKPSMRQQGVRDPPFPQAINGSSLNSVGTGLHHGVEGQKGKFM 406
           S+Y SV Q +AVKKP MRQQG+RD P P   +G S N V  GL +GVEG+K  FM
Sbjct: 605 SVYSSVGQPNAVKKPYMRQQGMRDCPPP---HGGSQNFV--GLRNGVEGRKQNFM 654


>gb|PIN11005.1| Methyl-CpG binding transcription regulator [Handroanthus
           impetiginosus]
          Length = 634

 Score =  124 bits (310), Expect = 4e-29
 Identities = 61/110 (55%), Positives = 74/110 (67%)
 Frame = +2

Query: 68  DILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYPS 247
           DI  DPCFEFAVK LTGEMP+E   + Q++FQQP+  S+   GCN    P    DN+YPS
Sbjct: 525 DIWTDPCFEFAVKTLTGEMPMEKGPQLQVTFQQPL-SSAGPTGCNGIMLPKIRLDNIYPS 583

Query: 248 IYSVSQFDAVKKPSMRQQGVRDPPFPQAINGSSLNSVGTGLHHGVEGQKG 397
            YS  QF+ VKKPS+RQ+ VRDPPFP+ +NG S N      HH VEG+ G
Sbjct: 584 NYSFGQFNDVKKPSLRQEAVRDPPFPRGMNGGSKN-----FHHSVEGEGG 628


>ref|XP_011084407.1| methyl-CpG-binding domain-containing protein 13 [Sesamum indicum]
          Length = 523

 Score = 99.0 bits (245), Expect = 2e-20
 Identities = 58/111 (52%), Positives = 68/111 (61%)
 Frame = +2

Query: 68  DILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYPS 247
           DI ADPCFEFAVK LTGE+P E+SS +Q S QQP   SS A GCNS        DN Y S
Sbjct: 422 DIWADPCFEFAVKTLTGEIPFENSSHFQNSLQQP-QSSSGASGCNS-------LDNSYSS 473

Query: 248 IYSVSQFDAVKKPSMRQQGVRDPPFPQAINGSSLNSVGTGLHHGVEGQKGK 400
            YS  QFD +     +Q GV++      +NGSS + V   LH GVEG+KGK
Sbjct: 474 SYSFCQFDVIMN---QQLGVKESSLSHPMNGSSQDFVDMSLHRGVEGRKGK 521


>dbj|GAV72511.1| MBD domain-containing protein [Cephalotus follicularis]
          Length = 565

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 36/102 (35%), Positives = 49/102 (48%)
 Frame = +2

Query: 68  DILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYPS 247
           DI  DPC +FA+K LTG +PV      Q   QQP + SS+      S  P     N   +
Sbjct: 456 DIWTDPCIDFAIKTLTGAIPVGFDMHSQDYLQQP-LSSSQTQASRVSPLPEVGLGNFCQT 514

Query: 248 IYSVSQFDAVKKPSMRQQGVRDPPFPQAINGSSLNSVGTGLH 373
            +   QFDA +KP  ++Q    P F  + N    NS G+ L+
Sbjct: 515 EFLCQQFDAAEKPLSKEQAPNQPRFNHSSNVGIRNSCGSDLN 556


>ref|XP_003549104.1| PREDICTED: methyl-CpG-binding domain-containing protein 13-like
           isoform X2 [Glycine max]
 gb|KRH09078.1| hypothetical protein GLYMA_16G194400 [Glycine max]
          Length = 546

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/99 (34%), Positives = 50/99 (50%)
 Frame = +2

Query: 80  DPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYPSIYSV 259
           DPC EFA+K LTG +P + + +   +  Q  + SS +     + S V + DN+Y + YS 
Sbjct: 444 DPCIEFAIKTLTGTIPSDSADQNPKNCLQQQLSSSNSQHSEMALSSVSL-DNIYKTDYSC 502

Query: 260 SQFDAVKKPSMRQQGVRDPPFPQAINGSSLNSVGTGLHH 376
           SQ+   +KP   +Q   DP      N    NS G+ L H
Sbjct: 503 SQYFDTQKPMFNKQSFVDPSLQHTRNIGIGNSAGSRLSH 541


>gb|KHN31504.1| Methyl-CpG-binding domain-containing protein 13 [Glycine soja]
          Length = 590

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/99 (34%), Positives = 50/99 (50%)
 Frame = +2

Query: 80  DPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYPSIYSV 259
           DPC EFA+K LTG +P + + +   +  Q  + SS +     + S V + DN+Y + YS 
Sbjct: 488 DPCIEFAIKTLTGTIPSDSADQNPKNCLQQQLSSSNSQHSEMALSSVSL-DNIYKTDYSC 546

Query: 260 SQFDAVKKPSMRQQGVRDPPFPQAINGSSLNSVGTGLHH 376
           SQ+   +KP   +Q   DP      N    NS G+ L H
Sbjct: 547 SQYFDTQKPMFNKQSFVDPSLQHTRNIGIGNSAGSRLSH 585


>ref|XP_014624690.1| PREDICTED: uncharacterized protein LOC100778412 isoform X1 [Glycine
           max]
 gb|KRH09077.1| hypothetical protein GLYMA_16G194400 [Glycine max]
          Length = 595

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 34/99 (34%), Positives = 50/99 (50%)
 Frame = +2

Query: 80  DPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYPSIYSV 259
           DPC EFA+K LTG +P + + +   +  Q  + SS +     + S V + DN+Y + YS 
Sbjct: 493 DPCIEFAIKTLTGTIPSDSADQNPKNCLQQQLSSSNSQHSEMALSSVSL-DNIYKTDYSC 551

Query: 260 SQFDAVKKPSMRQQGVRDPPFPQAINGSSLNSVGTGLHH 376
           SQ+   +KP   +Q   DP      N    NS G+ L H
Sbjct: 552 SQYFDTQKPMFNKQSFVDPSLQHTRNIGIGNSAGSRLSH 590


>ref|XP_022140862.1| methyl-CpG-binding domain-containing protein 13 isoform X4
           [Momordica charantia]
          Length = 554

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 29/67 (43%), Positives = 45/67 (67%)
 Frame = +2

Query: 65  GDILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYP 244
           G+ILADPC EFA+K LTGE+P++++   +  F Q  +GSS+A G +++ S    SD+ Y 
Sbjct: 455 GEILADPCIEFAIKTLTGEIPLDNNLDIEDYFHQ--LGSSKAQGTSANVSKHVGSDHFYS 512

Query: 245 SIYSVSQ 265
           ++ S  Q
Sbjct: 513 NVLSQKQ 519


>ref|XP_022140861.1| methyl-CpG-binding domain-containing protein 13 isoform X3
           [Momordica charantia]
          Length = 585

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 29/67 (43%), Positives = 45/67 (67%)
 Frame = +2

Query: 65  GDILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYP 244
           G+ILADPC EFA+K LTGE+P++++   +  F Q  +GSS+A G +++ S    SD+ Y 
Sbjct: 486 GEILADPCIEFAIKTLTGEIPLDNNLDIEDYFHQ--LGSSKAQGTSANVSKHVGSDHFYS 543

Query: 245 SIYSVSQ 265
           ++ S  Q
Sbjct: 544 NVLSQKQ 550


>ref|XP_022140860.1| methyl-CpG-binding domain-containing protein 13 isoform X2
           [Momordica charantia]
          Length = 586

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 29/67 (43%), Positives = 45/67 (67%)
 Frame = +2

Query: 65  GDILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYP 244
           G+ILADPC EFA+K LTGE+P++++   +  F Q  +GSS+A G +++ S    SD+ Y 
Sbjct: 487 GEILADPCIEFAIKTLTGEIPLDNNLDIEDYFHQ--LGSSKAQGTSANVSKHVGSDHFYS 544

Query: 245 SIYSVSQ 265
           ++ S  Q
Sbjct: 545 NVLSQKQ 551


>ref|XP_022140859.1| methyl-CpG-binding domain-containing protein 13 isoform X1
           [Momordica charantia]
          Length = 590

 Score = 57.0 bits (136), Expect = 6e-06
 Identities = 29/67 (43%), Positives = 45/67 (67%)
 Frame = +2

Query: 65  GDILADPCFEFAVKMLTGEMPVEDSSRYQISFQQPVVGSSRAVGCNSSTSPVFMSDNVYP 244
           G+ILADPC EFA+K LTGE+P++++   +  F Q  +GSS+A G +++ S    SD+ Y 
Sbjct: 491 GEILADPCIEFAIKTLTGEIPLDNNLDIEDYFHQ--LGSSKAQGTSANVSKHVGSDHFYS 548

Query: 245 SIYSVSQ 265
           ++ S  Q
Sbjct: 549 NVLSQKQ 555


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