BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00023216
         (853 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV43388.1| hypothetical protein F511_21980 [Dorcoceras hygro...   289   6e-94
gb|AFB73912.1| polyprotein [Citrus sinensis]                          302   1e-90
gb|AFB73911.1| polyprotein [Citrus sinensis]                          299   2e-89
gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna ...   266   8e-83
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]              274   2e-80
gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]              273   5e-80
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             272   1e-79
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              270   5e-79
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              265   2e-77
gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposo...   263   2e-76
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                  258   9e-75
ref|XP_020963654.1| uncharacterized protein LOC107607928 [Arachi...   258   9e-75
gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposo...   257   1e-74
gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposo...   257   2e-74
gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposo...   257   2e-74
gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposo...   257   2e-74
ref|XP_024039432.1| gibberellin-regulated protein 14-like [Citru...   201   4e-59
gb|PRQ41023.1| putative RNA-directed DNA polymerase [Rosa chinen...   198   2e-58
emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]   142   3e-51
gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo...   138   8e-50

>gb|KZV43388.1| hypothetical protein F511_21980 [Dorcoceras hygrometricum]
          Length = 326

 Score =  289 bits (740), Expect = 6e-94
 Identities = 143/223 (64%), Positives = 168/223 (75%)
 Frame = +2

Query: 185 QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
           + L+ + ++ +      +  WAEAVKTACYVINRSPS AIDLKTPME+WTGK  DYSR+H
Sbjct: 3   RTLLDRTRAMLNTAGLAKSFWAEAVKTACYVINRSPSVAIDLKTPMEVWTGKPVDYSRVH 62

Query: 365 TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
           TFGSPVYV+YN+QER+KLD KSRKCIFLGYADGVKG+RLWDPT HK++ISRDVIF EDK+
Sbjct: 63  TFGSPVYVLYNEQERSKLDSKSRKCIFLGYADGVKGFRLWDPTAHKLIISRDVIFEEDKV 122

Query: 545 QYKGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKP 724
             KGD        ETTT+ VEN   +ED  S  A+PEH             R+STRER+P
Sbjct: 123 --KGDKG---AQSETTTIQVENK-TDEDQISYGAIPEHEEQESVESEVSKVRQSTRERRP 176

Query: 725 PAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
           P W S+YV ESN+AYCLLTEDGEPS+F EAT+SSD S WMTAM
Sbjct: 177 PGWLSDYVTESNIAYCLLTEDGEPSSFQEATQSSDVSLWMTAM 219


>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  302 bits (774), Expect = 1e-90
 Identities = 151/224 (67%), Positives = 163/224 (72%), Gaps = 1/224 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L  + ++ +         WAEA KTACY++NRSPSTAI LKT MEMWTGK ADYS LH
Sbjct: 590  RTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLH 649

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYADGVKGYRLWDPT HK+VISRDVIF ED+L
Sbjct: 650  AFGCPVYVMYNAQERTKLDPKSRKCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQL 709

Query: 545  QYK-GDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERK 721
            Q K GD   VKE  ET  V VENN +N D  SSEA PEH             RRSTRER+
Sbjct: 710  QRKDGDDGTVKEKSETVPVYVENNPENSD--SSEAAPEHEEQEPVESEAPEVRRSTRERR 767

Query: 722  PPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            PP W SEYV E NVAYCLLTEDGEPSTFHEA  S D + WMTAM
Sbjct: 768  PPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNSLDVALWMTAM 811



 Score =  135 bits (340), Expect = 5e-32
 Identities = 65/80 (81%), Positives = 71/80 (88%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK YKA +ELESGKKIKCLRTDNGGE+T  EF +FC+QEGI+RQFTVAYTPQQNGVAERM
Sbjct: 529 FKEYKAWVELESGKKIKCLRTDNGGEYTDSEFLAFCKQEGIQRQFTVAYTPQQNGVAERM 588

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTL ER RAMLRTA LP +
Sbjct: 589 NRTLTERIRAMLRTAGLPNS 608


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  299 bits (766), Expect = 2e-89
 Identities = 149/224 (66%), Positives = 163/224 (72%), Gaps = 1/224 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L  + ++ +         WAEA KTACY++NRSPSTAI LKT MEMWTGK ADYS LH
Sbjct: 590  RTLTERIRAMLRTAGLPNSFWAEAAKTACYIVNRSPSTAIGLKTAMEMWTGKPADYSYLH 649

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG P+YVMYN QERTKLD KSR+CIFLGYADGVKGYRLWDPT HK+VISRDVIF ED+L
Sbjct: 650  AFGCPMYVMYNAQERTKLDAKSRRCIFLGYADGVKGYRLWDPTAHKIVISRDVIFVEDQL 709

Query: 545  QYK-GDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERK 721
            Q K GD   VKE  ET  V VENN +N D  SSEA PEH             RRSTRER+
Sbjct: 710  QRKDGDDGTVKEKSETVPVYVENNPENSD--SSEAAPEHEEQEPVESEAPEVRRSTRERR 767

Query: 722  PPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            PP W SEYV E NVAYCLLTEDGEPSTFHEA  SSD + WMTAM
Sbjct: 768  PPTWHSEYVTEINVAYCLLTEDGEPSTFHEALNSSDVALWMTAM 811



 Score =  135 bits (339), Expect = 7e-32
 Identities = 65/80 (81%), Positives = 71/80 (88%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK YKA +ELESGKKIKCLRTDNGGE+T  EF +FC+QEGI+RQFTVAYTPQQNGVAERM
Sbjct: 529 FKEYKAWVELESGKKIKCLRTDNGGEYTDGEFLAFCKQEGIQRQFTVAYTPQQNGVAERM 588

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTL ER RAMLRTA LP +
Sbjct: 589 NRTLTERIRAMLRTAGLPNS 608


>gb|KOM25686.1| hypothetical protein LR48_Vigan153s000800 [Vigna angularis]
          Length = 473

 Score =  266 bits (679), Expect = 8e-83
 Identities = 133/223 (59%), Positives = 161/223 (72%)
 Frame = +2

Query: 185 QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
           + L+ + ++ ++     +  WAEAVKTACY+INRSPSTAI +KTPMEMW GK ADYS LH
Sbjct: 202 RTLLERTRAMLKTTGLAKSFWAEAVKTACYLINRSPSTAIGVKTPMEMWKGKPADYSSLH 261

Query: 365 TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
            FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT HK+++SRDV+FAE KL
Sbjct: 262 VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTAHKIIVSRDVVFAE-KL 320

Query: 545 QYKGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKP 724
           Q   +  +V    + T+V +E   +++D  SSEA PEH             RR+TR  K 
Sbjct: 321 Q--SEQKNVSTPIDITSVQIEE--KSKDNDSSEAEPEHDEQEPNEVNHEDARRTTRLMKK 376

Query: 725 PAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
           P+W S+YVM ++ AYCLLTE+GEPSTF  A  SSD SQWMTAM
Sbjct: 377 PSWHSDYVMANHDAYCLLTEEGEPSTFQAALRSSDVSQWMTAM 419



 Score =  131 bits (330), Expect = 2e-31
 Identities = 62/80 (77%), Positives = 72/80 (90%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQ+ELE+GK IKCLRTDNGGE+T  +F +FC+QEGIKRQFTVA+TPQQNGVAERM
Sbjct: 141 FKEFKAQVELETGKMIKCLRTDNGGEYTDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERM 200

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAML+T  L K+
Sbjct: 201 NRTLLERTRAMLKTTGLAKS 220


>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  274 bits (700), Expect = 2e-80
 Identities = 138/223 (61%), Positives = 162/223 (72%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ ++     +  WAEAVKTACYVINRSPSTAIDLKTPMEMW GK  DYS LH
Sbjct: 590  RTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLH 649

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE++L
Sbjct: 650  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENEL 709

Query: 545  QYKGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKP 724
            Q K  +     ++ET  V +E   +  D  SSEA P H             RRSTR+ + 
Sbjct: 710  QSKQKNDST--SKETAIVQMEEKSKESD--SSEAEPVH-EEQEPDDVNNGVRRSTRQTQK 764

Query: 725  PAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            P+WQS+YVM S+ AYCL+TE+GEPSTFHEA   SDASQWMTAM
Sbjct: 765  PSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAM 807



 Score =  132 bits (332), Expect = 6e-31
 Identities = 63/80 (78%), Positives = 72/80 (90%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQIELE+GKKIKCLRTDNGGE+   EF +FC+QEGI RQFTVA+TPQQNGVAERM
Sbjct: 529 FKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERM 588

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAML+TA + K+
Sbjct: 589 NRTLLERTRAMLKTAGMAKS 608


>gb|ACL97383.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  273 bits (697), Expect = 5e-80
 Identities = 137/225 (60%), Positives = 163/225 (72%), Gaps = 2/225 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ ++     +  WAEAVKTACYVINRSPSTAIDLKTPMEMW GK  DYS LH
Sbjct: 590  RTLLERTRAMLKTAGMAKSFWAEAVKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLH 649

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE++L
Sbjct: 650  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENEL 709

Query: 545  Q--YKGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER 718
            Q   K DS+    ++ET  V +E   +  D   +E+V E              RRSTR+ 
Sbjct: 710  QSEQKNDST----SKETAIVQMEEKSKESDSSEAESVHEE---QEPDDVNDGVRRSTRQT 762

Query: 719  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            + P+WQS+YVM S+ AYCL+TE+GEPSTFHEA   SDASQWMTAM
Sbjct: 763  QKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAM 807



 Score =  129 bits (323), Expect = 9e-30
 Identities = 62/80 (77%), Positives = 71/80 (88%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQIELE+ KKIKCLRTDNGGE+   EF +FC+QEGI RQFTVA+TPQQNGVAERM
Sbjct: 529 FKAFKAQIELETRKKIKCLRTDNGGEYIDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERM 588

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAML+TA + K+
Sbjct: 589 NRTLLERTRAMLKTAGMAKS 608


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  272 bits (695), Expect = 1e-79
 Identities = 137/224 (61%), Positives = 157/224 (70%), Gaps = 1/224 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ +      +  WAEAV TACY++NR+PSTAI+LKTPMEMWTGK  DYS LH
Sbjct: 580  RTLLERTRAMLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLH 639

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FGS VY MYN QE TKLDPKSRKC FLGYADGVKGYRLWDPT HKVVISRDVIF ED+L
Sbjct: 640  IFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISRDVIFVEDRL 699

Query: 545  QY-KGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERK 721
            Q  + D S  KE  ETT + VE   + +   SSEA P H             R+S RE++
Sbjct: 700  QRGEVDDSTEKEKPETTQIQVEEEFEQD---SSEAEPAHEEPEPESSGAPTTRQSDREKR 756

Query: 722  PPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
             P W S+YVME NVAYCLLTEDGEPSTF EA  SSD SQW  AM
Sbjct: 757  RPTWHSDYVMEGNVAYCLLTEDGEPSTFQEAINSSDVSQWTAAM 800



 Score =  138 bits (347), Expect = 6e-33
 Identities = 64/80 (80%), Positives = 74/80 (92%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KA++EL+SGKKIKC RTDNGGE+TS+EF+ FC++EGIKRQFTVAYTPQQNGVAERM
Sbjct: 519 FKAFKARVELDSGKKIKCFRTDNGGEYTSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERM 578

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAMLR A L K+
Sbjct: 579 NRTLLERTRAMLRAAGLEKS 598


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  270 bits (690), Expect = 5e-79
 Identities = 135/225 (60%), Positives = 162/225 (72%), Gaps = 2/225 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ ++     +  WAEA KTACYVINRSPSTAIDLKTPMEMW GK  DYS LH
Sbjct: 590  RTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLH 649

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QE+TKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE++L
Sbjct: 650  VFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENEL 709

Query: 545  Q--YKGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER 718
            Q   K DS+    ++ET  V +E   +  D   +E+V E              RRSTR+ 
Sbjct: 710  QSEQKNDST----SKETAIVQMEEKSKESDSSEAESVHEE---QEPDDVNDGVRRSTRQT 762

Query: 719  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            + P+WQS+YVM S+ AYCL+TE+GEPSTFHEA   SDASQWMTAM
Sbjct: 763  QKPSWQSDYVMTSHDAYCLITEEGEPSTFHEALNGSDASQWMTAM 807



 Score =  129 bits (324), Expect = 7e-30
 Identities = 62/80 (77%), Positives = 71/80 (88%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQIELE+ KKIKCLRTDNGGE+   EF +FC+QEGI RQFTVA+TPQQNGVAERM
Sbjct: 529 FKAFKAQIELETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERM 588

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAML+TA + K+
Sbjct: 589 NRTLLERTRAMLKTAGMAKS 608


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  265 bits (678), Expect = 2e-77
 Identities = 132/225 (58%), Positives = 160/225 (71%), Gaps = 2/225 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ ++  +  +  WAEAVKTACYVINRSPST IDLKTPMEMW GK  DYS LH
Sbjct: 590  RTLLERTRAMLKTAEMAKSFWAEAVKTACYVINRSPSTTIDLKTPMEMWKGKPVDYSSLH 649

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE++L
Sbjct: 650  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAENEL 709

Query: 545  Q--YKGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER 718
            Q   K DS+     +ET  + +E   +  D   +E+V E              RRSTR+ 
Sbjct: 710  QSEQKNDST----FKETAILQIEEKSKESDSSEAESVHEE---QEPDDVNNGVRRSTRQT 762

Query: 719  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            + P+WQS+YVM  + AYCL+ E+GEPSTFHEA   SDASQWMTA+
Sbjct: 763  QKPSWQSDYVMTGHDAYCLIAEEGEPSTFHEALNGSDASQWMTAI 807



 Score =  132 bits (332), Expect = 6e-31
 Identities = 63/80 (78%), Positives = 72/80 (90%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQIELE+GKKIKCLRTDNGGE+   EF +FC+QEGI RQFTVA+TPQQNGVAERM
Sbjct: 529 FKAFKAQIELETGKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERM 588

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAML+TA + K+
Sbjct: 589 NRTLLERTRAMLKTAEMAKS 608


>gb|KYP38095.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  263 bits (671), Expect = 2e-76
 Identities = 132/225 (58%), Positives = 159/225 (70%), Gaps = 2/225 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ +      +  WAEAVKTACY+INRSPSTAI LKTPMEMW GK ++YS LH
Sbjct: 540  RTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLH 599

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE +L
Sbjct: 600  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAETEL 659

Query: 545  QYKGDSSDVKENQET--TTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER 718
            Q +      +EN  T   T +VE   ++++  +SEA  EH             RR+TR+ 
Sbjct: 660  QKE------QENDSTIKDTSIVEIGGKSKEDDTSEAEQEHDEQEPNEDNDGDVRRTTRQT 713

Query: 719  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            K P+W S+YVM S+ AYCLLTE+GEPSTF EA  SSD SQWM AM
Sbjct: 714  KKPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAM 758



 Score =  132 bits (331), Expect = 8e-31
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQ+EL++GK+IKCLRTDNGGE+   +F +FC+QEGIKRQFTVA+TPQQNGVAERM
Sbjct: 479 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERM 538

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAMLRTA L K+
Sbjct: 539 NRTLLERTRAMLRTAGLAKS 558


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score =  258 bits (659), Expect = 9e-75
 Identities = 130/223 (58%), Positives = 155/223 (69%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ ++     +  WAEA KTACYVINRSPSTAI LKTPMEMW GK  DYS L 
Sbjct: 590  RTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLR 649

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSR+C FLGYAD VKGYRLWDPT  K+ +SRDVIF E++L
Sbjct: 650  VFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPTARKIFVSRDVIFVENEL 709

Query: 545  QYKGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKP 724
            Q K   +D    +ET TV +E   +    ++SEA PEH             RR+TR+ + 
Sbjct: 710  Q-KEQKND-GTTKETATVEIE---EKSGEENSEAEPEHEEQEPNEVNDAEPRRTTRQIRK 764

Query: 725  PAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            P+W SEYVM S+ AYCLL+EDGEPSTFHEA   SDAS WM AM
Sbjct: 765  PSWHSEYVMASHDAYCLLSEDGEPSTFHEAVNGSDASLWMAAM 807



 Score =  132 bits (331), Expect = 8e-31
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQ+ELE+GK+IKCLRTDNGGE+T  +F +FC+QEGI RQFTVA+TPQQNGVAERM
Sbjct: 529 FKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERM 588

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAML+TA L K+
Sbjct: 589 NRTLLERTRAMLKTAGLAKS 608


>ref|XP_020963654.1| uncharacterized protein LOC107607928 [Arachis ipaensis]
          Length = 1235

 Score =  258 bits (658), Expect = 9e-75
 Identities = 131/223 (58%), Positives = 158/223 (70%)
 Frame = +2

Query: 185 QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
           + L+ + ++ ++     +  WAEAVKTACYVINRSPSTAI LKTPMEMW GK  +YS LH
Sbjct: 290 RTLLERARAMLQTAGLAKFFWAEAVKTACYVINRSPSTAIGLKTPMEMWQGKPPNYSSLH 349

Query: 365 TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
            FG PVYVMYN QERTKLDPKSRKCIFLGYADGVKGYRLWDPT  KVV+SRDVIFAED+L
Sbjct: 350 IFGCPVYVMYNSQERTKLDPKSRKCIFLGYADGVKGYRLWDPTARKVVVSRDVIFAEDEL 409

Query: 545 QYKGDSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKP 724
           Q + ++      +E TTV ++   +  D   SEA P+H             RRSTR+R+ 
Sbjct: 410 QKEQENDST--IKEITTVQIDEKCREGD--LSEAEPQH-EEQEAEANDIEVRRSTRQRRT 464

Query: 725 PAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
           P+W S YV+ ++ AYCLLTEDGEP+ F EA  + D S WMTAM
Sbjct: 465 PSWHSNYVLTNHDAYCLLTEDGEPTIFMEAMRNPDTSMWMTAM 507



 Score =  127 bits (319), Expect = 3e-29
 Identities = 60/79 (75%), Positives = 70/79 (88%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KA++E+ESGKKIKCLRTDNGGE+   +F +FC+Q GI+RQFTVAYTPQQNGVAERM
Sbjct: 229 FKEFKAKLEVESGKKIKCLRTDNGGEYVDSDFITFCKQAGIQRQFTVAYTPQQNGVAERM 288

Query: 183 NRTLLERTRAMLRTASLPK 239
           NRTLLER RAML+TA L K
Sbjct: 289 NRTLLERARAMLQTAGLAK 307


>gb|KYP36645.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  257 bits (657), Expect = 1e-74
 Identities = 130/225 (57%), Positives = 158/225 (70%), Gaps = 2/225 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ +      +  WAEAVKTACY+INRSPSTAI LKTPMEMW+GK ++YS LH
Sbjct: 540  RTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWSGKPSNYSSLH 599

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE +L
Sbjct: 600  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAETEL 659

Query: 545  QYKGDSSDVKENQET--TTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER 718
            Q +      +EN  T   T +VE   +++   +SEA  EH             ++  RER
Sbjct: 660  QKE------QENDSTIKDTSIVEIGGKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRER 713

Query: 719  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            + P+W S+YVM S+ AYCLLTE+GEPSTF EA  SSD SQWM AM
Sbjct: 714  RRPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAM 758



 Score =  132 bits (331), Expect = 8e-31
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQ+EL++GK+IKCLRTDNGGE+   +F +FC+QEGIKRQFTVA+TPQQNGVAERM
Sbjct: 479 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERM 538

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAMLRTA L K+
Sbjct: 539 NRTLLERTRAMLRTAGLAKS 558


>gb|KYP53032.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  257 bits (657), Expect = 2e-74
 Identities = 130/225 (57%), Positives = 158/225 (70%), Gaps = 2/225 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ +      +  WAEAVKTACY+INRSPSTAI LKTPMEMW+GK ++YS LH
Sbjct: 589  RTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWSGKPSNYSSLH 648

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE +L
Sbjct: 649  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAETEL 708

Query: 545  QYKGDSSDVKENQET--TTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER 718
            Q +      +EN  T   T +VE   +++   +SEA  EH             ++  RER
Sbjct: 709  QKE------QENDSTIKDTSIVEIGGKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRER 762

Query: 719  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            + P+W S+YVM S+ AYCLLTE+GEPSTF EA  SSD SQWM AM
Sbjct: 763  RRPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAM 807



 Score =  132 bits (331), Expect = 8e-31
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQ+EL++GK+IKCLRTDNGGE+   +F +FC+QEGIKRQFTVA+TPQQNGVAERM
Sbjct: 528 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERM 587

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAMLRTA L K+
Sbjct: 588 NRTLLERTRAMLRTAGLAKS 607


>gb|KYP67664.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1256

 Score =  257 bits (656), Expect = 2e-74
 Identities = 130/225 (57%), Positives = 157/225 (69%), Gaps = 2/225 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ +      +  WAEAVKTACY+INRSPSTAI LKTPMEMW GK ++YS LH
Sbjct: 540  RTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLH 599

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE +L
Sbjct: 600  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAETEL 659

Query: 545  QYKGDSSDVKENQET--TTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER 718
            Q +      +EN  T   T +VE   +++   +SEA  EH             ++  RER
Sbjct: 660  QKE------QENDSTIKDTSIVEIGGKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRER 713

Query: 719  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            + P+W S+YVM S+ AYCLLTE+GEPSTF EA  SSD SQWM AM
Sbjct: 714  RRPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAM 758



 Score =  132 bits (331), Expect = 8e-31
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQ+EL++GK+IKCLRTDNGGE+   +F +FC+QEGIKRQFTVA+TPQQNGVAERM
Sbjct: 479 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERM 538

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAMLRTA L K+
Sbjct: 539 NRTLLERTRAMLRTAGLAKS 558


>gb|KYP42748.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 1305

 Score =  257 bits (656), Expect = 2e-74
 Identities = 130/225 (57%), Positives = 157/225 (69%), Gaps = 2/225 (0%)
 Frame = +2

Query: 185  QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
            + L+ + ++ +      +  WAEAVKTACY+INRSPSTAI LKTPMEMW GK ++YS LH
Sbjct: 589  RTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLH 648

Query: 365  TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
             FG PVYVMYN QERTKLDPKSRKCIFLGYAD VKGYRLWDPT  KVV+SRDV+FAE +L
Sbjct: 649  VFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPTARKVVVSRDVVFAETEL 708

Query: 545  QYKGDSSDVKENQET--TTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRER 718
            Q +      +EN  T   T +VE   +++   +SEA  EH             ++  RER
Sbjct: 709  QKE------QENDSTIKDTSIVEIGGKSKKDDTSEAEQEHEEQEPDEANDEEVQQIRRER 762

Query: 719  KPPAWQSEYVMESNVAYCLLTEDGEPSTFHEATESSDASQWMTAM 853
            + P+W S+YVM S+ AYCLLTE+GEPSTF EA  SSD SQWM AM
Sbjct: 763  RRPSWHSDYVMASHDAYCLLTEEGEPSTFQEALRSSDVSQWMAAM 807



 Score =  132 bits (331), Expect = 8e-31
 Identities = 62/80 (77%), Positives = 73/80 (91%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK +KAQ+EL++GK+IKCLRTDNGGE+   +F +FC+QEGIKRQFTVA+TPQQNGVAERM
Sbjct: 528 FKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERM 587

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAMLRTA L K+
Sbjct: 588 NRTLLERTRAMLRTAGLAKS 607


>ref|XP_024039432.1| gibberellin-regulated protein 14-like [Citrus clementina]
          Length = 339

 Score =  201 bits (510), Expect = 4e-59
 Identities = 102/152 (67%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
 Frame = +2

Query: 380 VYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKLQYKG- 556
           +Y++YN QE TKLD KSR+CIFLGY DGVKGYRLWDPT HK+VISRDVIF ED+LQ +  
Sbjct: 1   MYLIYNAQEITKLDAKSRRCIFLGYTDGVKGYRLWDPTAHKIVISRDVIFIEDQLQRRDE 60

Query: 557 DSSDVKENQETTTVLVENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQ 736
           D+   KE  ET  V VENNL  ED  SSEA PEH             RRSTRER+PPAW 
Sbjct: 61  DNGTTKEKSETVPVYVENNL--EDSDSSEAAPEHEEQEPIETETLEFRRSTRERRPPAWH 118

Query: 737 SEYVMESNVAYCLLTEDGEPSTFHEATESSDA 832
           SEYV + NVAYCLLTEDGEPSTFHEA ESSD+
Sbjct: 119 SEYVTKINVAYCLLTEDGEPSTFHEALESSDS 150


>gb|PRQ41023.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 306

 Score =  198 bits (503), Expect = 2e-58
 Identities = 97/140 (69%), Positives = 110/140 (78%)
 Frame = +2

Query: 185 QNLVRKDKSNVENCKSTQDIWAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLH 364
           + L+ + ++ +   +  +  WAEAVKT CYVIN+SPSTAIDLKTPMEMWTGK ADYSRLH
Sbjct: 167 RTLLERTRAMLRTAEMAKSFWAEAVKTTCYVINQSPSTAIDLKTPMEMWTGKPADYSRLH 226

Query: 365 TFGSPVYVMYNDQERTKLDPKSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAEDKL 544
           TFGSPVYVMYN QE +KLDPKSRKCIFLGYADGVKGY LWDPT HKV+ISRDV   EDK+
Sbjct: 227 TFGSPVYVMYNAQETSKLDPKSRKCIFLGYADGVKGYSLWDPTAHKVIISRDV---EDKV 283

Query: 545 QYKGDSSDVKENQETTTVLV 604
           Q K + S  KE   TT V V
Sbjct: 284 QGKENDSTSKEKLVTTIVRV 303



 Score =  142 bits (357), Expect = 1e-36
 Identities = 67/80 (83%), Positives = 77/80 (96%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FKV+KA++ELES KKIKCLRTDNGGE+TS+EF++FC+QEGIKRQFTVAYTPQQNGVAERM
Sbjct: 106 FKVFKARVELESEKKIKCLRTDNGGEYTSNEFDNFCKQEGIKRQFTVAYTPQQNGVAERM 165

Query: 183 NRTLLERTRAMLRTASLPKT 242
           NRTLLERTRAMLRTA + K+
Sbjct: 166 NRTLLERTRAMLRTAEMAKS 185


>emb|CAN60570.1| hypothetical protein VITISV_000227 [Vitis vinifera]
          Length = 605

 Score =  142 bits (359), Expect(2) = 3e-51
 Identities = 82/204 (40%), Positives = 105/204 (51%), Gaps = 1/204 (0%)
 Frame = +2

Query: 245 WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLHTFGSPVYVMYNDQERTKLDP 424
           W EAV  ACY+INRSP   +  K   E+W G   DYS L  FG P YV   +++R+KLD 
Sbjct: 119 WVEAVNMACYLINRSPRATLHGKVVDEVWIGSPVDYSSLRLFGCPTYVHIPNEDRSKLDE 178

Query: 425 KSRKCIFLGYADGVKGYRLWDPTTHKVVISRDVIFAE-DKLQYKGDSSDVKENQETTTVL 601
           KSR+CIFLGY  GVKG+++WDP  +KVVISRDV+F E   LQ+K  S D + +  T    
Sbjct: 179 KSRQCIFLGYQKGVKGFKIWDPKANKVVISRDVVFDEKTMLQWKSSSEDQQHHSITMD-- 236

Query: 602 VENNLQNEDPKSSEAVPEHXXXXXXXXXXXXXRRSTRERKPPAWQSEYVMESNVAYCLLT 781
                                            R     KP      Y  E  V+Y L+T
Sbjct: 237 ---------------------------------RPRCTIKPSIM---YGFEDLVSYALIT 260

Query: 782 EDGEPSTFHEATESSDASQWMTAM 853
            +G+P+TF EA  S + S+WM AM
Sbjct: 261 SNGDPTTFQEAIHSQEKSRWMGAM 284



 Score = 89.0 bits (219), Expect(2) = 3e-51
 Identities = 39/71 (54%), Positives = 53/71 (74%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           FK++K ++E ++G+KIKCLR+DNG E+T  +F   C+Q GIKR F V  TPQQN VAE M
Sbjct: 38  FKLWKTEVENQTGRKIKCLRSDNGTEYTDSKFTELCEQHGIKRHFIVRKTPQQNNVAEMM 97

Query: 183 NRTLLERTRAM 215
           N T+ ERT+ +
Sbjct: 98  NITIAERTQCL 108


>gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Dendrobium catenatum]
          Length = 993

 Score =  138 bits (348), Expect(2) = 8e-50
 Identities = 86/225 (38%), Positives = 120/225 (53%), Gaps = 22/225 (9%)
 Frame = +2

Query: 245  WAEAVKTACYVINRSPSTAIDLKTPMEMWTGKSADYSRLHTFGSPVYVMYNDQERTKLDP 424
            W EA+ TACY++NR+PS+AI+ KTP E+W GK    + L  FG    + Y  Q + KL+P
Sbjct: 548  WGEALSTACYLVNRTPSSAINFKTPQELWKGKPPSLTHLRVFGC---LAYPHQNKGKLEP 604

Query: 425  KSRKCIFLGYADGVKGYRLWDPTTH--KVVISRDVIFAEDKLQYKGDSSDVKENQETTTV 598
            +S KC+FLGY  GVKGYRLWD ++   K +ISRDVIF E++L Y  +S    EN++TT  
Sbjct: 605  RSIKCVFLGYPTGVKGYRLWDLSSPGVKTIISRDVIFNENRL-YISES----ENKDTTIS 659

Query: 599  LVENNLQNED-------PKSS---------EAVPEHXXXXXXXXXXXXXRRSTRERKPPA 730
             +EN+  N+D       P S+            PE+                 RER+   
Sbjct: 660  SIENSDSNKDYYEFEVEPPSNTLSFENPQQSTEPENEPEPVSENNHDYLLSRDRERRNIK 719

Query: 731  WQSEYVMESNVAYCLLT----EDGEPSTFHEATESSDASQWMTAM 853
              S+Y     + Y LL+    ED EP ++ EA    D+  W+ AM
Sbjct: 720  PPSKYGYAELIEYALLSALEYEDSEPISYKEAVSCKDSENWVKAM 764



 Score = 88.2 bits (217), Expect(2) = 8e-50
 Identities = 41/79 (51%), Positives = 56/79 (70%)
 Frame = +3

Query: 3   FKVYKAQIELESGKKIKCLRTDNGGEFTSDEFESFCQQEGIKRQFTVAYTPQQNGVAERM 182
           F  +K+ +E +  +K+K LRTDNG EF ++ F  FC   GI R  TV++TPQQNG+AERM
Sbjct: 467 FLEWKSMVENQKNRKLKVLRTDNGLEFCNESFNKFCSDSGIVRHKTVSHTPQQNGLAERM 526

Query: 183 NRTLLERTRAMLRTASLPK 239
           NRTLL+R R +L ++ L K
Sbjct: 527 NRTLLDRVRCLLFSSGLSK 545