BLASTX nr result

ID: Rehmannia32_contig00023036 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00023036
         (472 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|OVA04701.1| hypothetical protein BVC80_1719g29 [Macleaya cord...    52   9e-06

>gb|OVA04701.1| hypothetical protein BVC80_1719g29 [Macleaya cordata]
          Length = 86

 Score = 51.6 bits (122), Expect = 9e-06
 Identities = 35/83 (42%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
 Frame = -3

Query: 365 SIFSSFDAVCAELLG----CXXXXXXXXXXXXXXXXXXKIINDRISEKQLRKSKQAKDAG 198
           SIFSSFDAVCAE LG                       + IN +  + Q+R+ KQ +   
Sbjct: 3   SIFSSFDAVCAEYLGQKIGFSFNNKMEMMKMRNNKGDDENINSKPPQTQVREPKQQQQKQ 62

Query: 197 AAWG-PRFALELDGLNCFETLIS 132
                PRFA ELDGLNCFET++S
Sbjct: 63  QQRRTPRFAPELDGLNCFETMVS 85


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