BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00022564
         (1132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_024172006.1| uncharacterized protein LOC112178017 [Rosa c...   311   9e-94
gb|PNX71213.1| ribonuclease H [Trifolium pratense]                    306   3e-92
gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinen...   307   4e-91
ref|XP_024195790.1| uncharacterized protein LOC112198938 [Rosa c...   306   6e-91
gb|PNX71533.1| ribonuclease H [Trifolium pratense]                    298   2e-90
gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]           303   2e-90
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]           298   1e-89
gb|PNX71389.1| ribonuclease H, partial [Trifolium pratense]           285   1e-89
ref|XP_024199817.1| uncharacterized protein LOC112203016 [Rosa c...   296   9e-89
gb|KMS98119.1| hypothetical protein BVRB_4g095640 [Beta vulgaris...   284   9e-89
gb|PNX99664.1| ribonuclease H, partial [Trifolium pratense]           296   1e-88
ref|XP_023909336.1| uncharacterized protein LOC112020997 [Quercu...   301   1e-88
gb|PNX72264.1| ribonuclease H [Trifolium pratense]                    293   5e-88
gb|PNX80752.1| ribonuclease H, partial [Trifolium pratense]           289   6e-88
ref|XP_019190015.1| PREDICTED: uncharacterized protein LOC109184...   288   6e-88
gb|PNY14023.1| ribonuclease H [Trifolium pratense]                    280   1e-87
ref|XP_021762976.1| uncharacterized protein LOC110727703 [Chenop...   282   1e-87
gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]           292   3e-87
gb|PNX92808.1| ribonuclease H [Trifolium pratense]                    291   5e-87
gb|PNY15111.1| ribonuclease H [Trifolium pratense]                    296   7e-87

>ref|XP_024172006.1| uncharacterized protein LOC112178017 [Rosa chinensis]
          Length = 1045

 Score =  311 bits (798), Expect = 9e-94
 Identities = 148/356 (41%), Positives = 223/356 (62%)
 Frame = +1

Query: 58   ILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSI 237
            I PSRGLRQGD ISPYLF++ +E+ S +I  A  N+  HG+K+C+  P ISHL FADDS 
Sbjct: 243  ISPSRGLRQGDAISPYLFLLCAEVLSRMIKEAERNDLMHGVKVCQQAPAISHLFFADDSF 302

Query: 238  IFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQK 417
            IF +A +     + +I +KY  +SGQ +N+EK             + ++ + L   ++ K
Sbjct: 303  IFSKAEITDILCMRDIFQKYEHMSGQQINYEKSCISFSKNVPRWKQDDLARVLGVTRVDK 362

Query: 418  SCRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMS 597
              +YLGLP  +  SK E F Y++D V+ R   W++  LSTAGK++L+++V++++P +VMS
Sbjct: 363  HDKYLGLPTELSYSKDEAFWYLVDRVRTRTQGWRNKTLSTAGKEVLIKAVVQSIPTYVMS 422

Query: 598  CFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESL 777
            CF+LP  +C  +++L + FWWG   G  +K HW AWD L  P++EGGL F D+ LFN +L
Sbjct: 423  CFELPKHLCDEMHRLMARFWWG-EFGEERKIHWVAWDKLCAPKKEGGLGFRDMHLFNTAL 481

Query: 778  MAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLE 957
            +AKQ WRL+ + D L+ ++ K++YFPN D + A +  GAS+ W+S M+ R +L  GLR +
Sbjct: 482  LAKQGWRLICRLDSLLAQVFKARYFPNTDFMHAVLHKGASFSWRSIMKGRDLLKKGLRFQ 541

Query: 958  IGDGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
            +G+G+ I IW  PW+P    F P  I         V DL + +   W E L+ ++F
Sbjct: 542  VGNGEDISIWNDPWVPLPYRFKPFSIPMQGAEDLRVVDLIDEETGDWQEWLLHELF 597


>gb|PNX71213.1| ribonuclease H [Trifolium pratense]
          Length = 951

 Score =  306 bits (783), Expect = 3e-92
 Identities = 149/354 (42%), Positives = 212/354 (59%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RGLRQGDP+SP+LFII +++ S LI  A +    HG+K+    P I+HLLFADDS+ F
Sbjct: 209  PQRGLRQGDPLSPFLFIICADVLSGLITQAKNKQLIHGVKVANGAPEITHLLFADDSLFF 268

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
            C A+  +A  +  I+  Y + SGQLVN +K             K  +   L   ++    
Sbjct: 269  CRATKQEATNVRNIILDYQRASGQLVNMQKSEIIFSKMVPNEVKVEVNHILPMTRVDHFS 328

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            +YLG+P  IGRSK+++FNY+ D V K++  WK   LS AG+  LL++VI+A+P ++MSCF
Sbjct: 329  KYLGMPTDIGRSKQQIFNYIKDRVWKKLKGWKEKNLSYAGRGTLLKAVIQAIPTYIMSCF 388

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
             LP G+CK I  + SNFWWG S    KK HW  W  +   + +GG  F +  +FNE+L+A
Sbjct: 389  LLPKGLCKQIESMTSNFWWG-SNTDKKKLHWINWKKMCKNKTQGGYGFRNTCMFNEALLA 447

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            KQ WR+ TQPD L+ K+ K+KYFP C  +EA   +  S+ W+S + AR +L  G    IG
Sbjct: 448  KQGWRIATQPDSLVAKVYKAKYFPKCQFMEAKNGNMLSYTWRSILHARWILQKGCFWTIG 507

Query: 964  DGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
            +G+ + IW+  WLPK NGF     +       +V DL N     WN+ L+ ++F
Sbjct: 508  NGESVNIWKDSWLPKQNGFKVWSTQQGYTRYNLVKDLINPATNQWNQNLIHQIF 561


>gb|PRQ55763.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1228

 Score =  307 bits (786), Expect = 4e-91
 Identities = 144/356 (40%), Positives = 223/356 (62%)
 Frame = +1

Query: 58   ILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSI 237
            ++PSRGLRQGD ISPYLF+I +E  S LI  A    S HG+++C   P ISHL FADDS 
Sbjct: 478  VVPSRGLRQGDSISPYLFLICAETLSRLILKAEDMGSIHGVRICTGAPPISHLFFADDSF 537

Query: 238  IFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQK 417
            IF +A   +  +L  + E+Y K SGQ++NF+K             +  +  +L  +++ K
Sbjct: 538  IFFKAETDECDVLKRMFEQYEKASGQMINFDKSCVSFSKNVKRAKQDELAASLRVLRVDK 597

Query: 418  SCRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMS 597
              +YLGLP  I  SK E FN++ + V+KR   W++  LS AGK+I++++V +++P +VMS
Sbjct: 598  HDKYLGLPTEISYSKSEAFNFLSEKVRKRTQGWRAKTLSAAGKEIMIKAVAQSIPTYVMS 657

Query: 598  CFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESL 777
            CF+LP  +C  +++L + FWWG  +   KK HW AW+ L +P+ EGGL F ++  FN++L
Sbjct: 658  CFELPKHLCLEMHRLMAQFWWG-DKSNDKKIHWLAWEKLCVPKAEGGLGFRNMVQFNQAL 716

Query: 778  MAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLE 957
            +AKQ WR++  P+ L+ ++ K+KYFPNCD ++A   SG+S+ WKS +  R +L  GLRL+
Sbjct: 717  LAKQGWRIIQNPNSLLARLYKAKYFPNCDFMKAEASSGSSYAWKSILFGRELLRKGLRLQ 776

Query: 958  IGDGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
            +G+G +I +W   WLP  + F P            V +L + +   W+  L++++F
Sbjct: 777  VGNGSQIAVWTDQWLPLPHSFRPISTPKEGLETLRVDELIDQEENEWHMFLLQELF 832


>ref|XP_024195790.1| uncharacterized protein LOC112198938 [Rosa chinensis]
          Length = 1175

 Score =  306 bits (783), Expect = 6e-91
 Identities = 148/356 (41%), Positives = 220/356 (61%)
 Frame = +1

Query: 58   ILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSI 237
            I PSRGLRQGD ISPYLF++ +E+ S +I  A  N+  HG+   R  P ISHL FADDS 
Sbjct: 471  IYPSRGLRQGDAISPYLFLLCAEVLSRMIKEAERNDLMHGV---RQAPAISHLFFADDSF 527

Query: 238  IFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQK 417
            IF +A       + +I +KY ++SGQ +N+EK             + ++   L   ++ K
Sbjct: 528  IFSKAETTDILCMRDIFQKYEQMSGQQINYEKSCISFSKNVPRWKQDDLACVLGVKRVDK 587

Query: 418  SCRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMS 597
              +YLGLP  +  SK E F Y++D V+ R   W++  LSTAGK++L+++V++++P +VMS
Sbjct: 588  HDKYLGLPTELSYSKDEAFRYLVDRVRTRTQGWRNKTLSTAGKEVLIKAVVQSIPTYVMS 647

Query: 598  CFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESL 777
            CF+LP  +C  +++L + FWWG   G  +K HW AWD L  P++EGGL F D+ LFN +L
Sbjct: 648  CFELPKHLCDEMHRLMARFWWG-EFGAERKIHWVAWDKLCAPKKEGGLGFRDMHLFNTAL 706

Query: 778  MAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLE 957
            +AKQ WRL+ +PD L+ ++ K++YFPN D + A +  GAS+ W+S M+ R +L  GLR +
Sbjct: 707  LAKQGWRLICRPDSLLAQVFKARYFPNTDFMHAVLHKGASFSWRSIMKGRDLLKKGLRFQ 766

Query: 958  IGDGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
            +G+G+ I IW  PW+P    F P  I         V DL + +   W E L+ ++F
Sbjct: 767  VGNGEDISIWNDPWVPLPYRFKPFSIPMQGAEDLRVVDLIDEETGDWQEWLLHELF 822


>gb|PNX71533.1| ribonuclease H [Trifolium pratense]
          Length = 798

 Score =  298 bits (763), Expect = 2e-90
 Identities = 145/354 (40%), Positives = 215/354 (60%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RGLRQGDP+SPYLFI+ +++ S LI+ AA     HG+K+ R+ P +SHL FADDS++F
Sbjct: 59   PERGLRQGDPLSPYLFILCADVLSGLIHKAAKTKEIHGIKVARSAPQLSHLFFADDSLLF 118

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
              AS  +   +  IL+ Y + SGQ+VN +K            DK  IC  +    ++   
Sbjct: 119  TRASSHETSKILNILDTYQQASGQVVNLDKSEASFSRNVRINDKDMICNMMGAKAVEAQS 178

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            RYLG P+  GRSKK VF++V+D V K++  WK  FLS AGK+ L+++V +A+P +++SC+
Sbjct: 179  RYLGFPIPFGRSKKVVFSFVMDRVWKKVKGWKERFLSRAGKETLIKAVAQAIPNYILSCY 238

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
            K+P G CK I+ + + FWWG S+   +K HW +W  LS  + +GG+ F  ++ FN++L+ 
Sbjct: 239  KMPVGCCKDIDSMLAKFWWG-SKDESRKIHWMSWQKLSKAKLDGGMGFRGMEDFNKALLG 297

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            KQ WRLVT    L+ KI KSKY+PN + + A      S+ W+S + AR ++  G   +IG
Sbjct: 298  KQCWRLVTGESSLLEKIFKSKYYPNGNFMSAKEGYQPSYGWRSILSARDLVDKGGLWKIG 357

Query: 964  DGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
            +G+K+KIW+  WLP L     K +    P    V +L +VD   W   L+   F
Sbjct: 358  NGRKVKIWKDRWLPDLKVIEFKGVNCPLPEDACVAELIDVDTKQWKRDLIFSCF 411


>gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1068

 Score =  303 bits (775), Expect = 2e-90
 Identities = 146/356 (41%), Positives = 219/356 (61%), Gaps = 2/356 (0%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P+RG+RQGDP+SPY+FI+ + + S L++  A + + HG+++ RN P I+HLLFADDS++F
Sbjct: 596  PNRGIRQGDPLSPYIFILCANVLSGLLHKEAQSQAIHGIQVARNAPKITHLLFADDSLLF 655

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
              A+  +A  + ++L KY   SGQ+V++EK            +K+ IC  +    +    
Sbjct: 656  ARANQNEANTIIQVLNKYQLASGQMVSYEKSEVSFSRNVPDIEKNIICNKIEVKAVTSHS 715

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            RYLGLP+  GRSKKEVF +V D + K++  WK   LS AGK+ L+++V +A+P ++MSC+
Sbjct: 716  RYLGLPVIFGRSKKEVFAFVQDRIWKKVKGWKEKCLSKAGKETLIKAVAQAIPSYIMSCY 775

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
            K+P G C  I  + S FWWG S+    K HW +WD L   + +GGL F     FN++L+ 
Sbjct: 776  KIPEGSCANIESMLSKFWWGSSD-QKNKIHWMSWDRLGRAKNKGGLGFRGFSDFNKALLG 834

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            KQ WRL++  D L+ ++ KSKYFP    L++      S+ W+S   A+ V+  GLR  IG
Sbjct: 835  KQCWRLMSNEDSLLSRVFKSKYFPRSCFLKSKCGYQPSYAWRSLFNAKSVIDLGLRWTIG 894

Query: 964  DGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPK--MVCDLFNVDGVSWNETLVKKVF 1125
            +GQ++KIW+ PWLP+L+ F  K   PV    +  +V +L +VD   W   LV   F
Sbjct: 895  NGQQVKIWKDPWLPELSSF--KVWSPVCNLDEDAVVAELIDVDLKKWKRELVMNSF 948


>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
          Length = 894

 Score =  298 bits (762), Expect = 1e-89
 Identities = 145/358 (40%), Positives = 217/358 (60%), Gaps = 2/358 (0%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RG+RQGDP+SPY+FI+ + + S +++  A NN  HGL++ RN P I+HLLFADDS++F
Sbjct: 225  PERGIRQGDPLSPYVFILCANVLSGMLHKGARNNKIHGLQVARNAPKITHLLFADDSLLF 284

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
              A+  +A ++  IL+ Y   SGQLV+ EK            +K+ IC  +    +    
Sbjct: 285  ARANQKEAEVIINILQTYQTASGQLVSLEKSEVSFSRNLPTIEKNMICNKIDVKAVTNHS 344

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            +YLGLP+  GRSKKE+F  V + + K+I  WK   LS AGK+ L++SV +A+P ++MSC+
Sbjct: 345  KYLGLPVIFGRSKKEIFASVQERIWKKIKGWKEKCLSRAGKETLIKSVAQAIPNYIMSCY 404

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
            KLP+G C  I  + + FWWG +E   +K HW +W+ L   + +GGL F   + FN++L+ 
Sbjct: 405  KLPTGCCDNIEAMLAKFWWGTTE-KQRKIHWVSWNKLGKAKSKGGLGFRSFEDFNKALLG 463

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            KQ WRL+  PD L+ K+ KS+YFP    ++A +    S+ W+S   +R V+  G R  IG
Sbjct: 464  KQCWRLLQNPDSLLAKVFKSRYFPRSKFMDANVGYQPSYAWRSLCNSREVIDVGARWLIG 523

Query: 964  DGQKIKIWQHPWLPKLNGFTPKCIEPVTPCP--KMVCDLFNVDGVSWNETLVKKVFCS 1131
            +G+ + IW   WLP  + F  K   PV+      MV DL N++   W++ LV+  F S
Sbjct: 524  NGKDVHIWNDKWLPAQDKF--KVWSPVSNLAPNAMVSDLINLETKMWDKNLVQNCFNS 579


>gb|PNX71389.1| ribonuclease H, partial [Trifolium pratense]
          Length = 405

 Score =  285 bits (728), Expect = 1e-89
 Identities = 144/360 (40%), Positives = 212/360 (58%), Gaps = 3/360 (0%)
 Frame = +1

Query: 55   YILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDS 234
            Y  P RGLRQGDP+SPYLFII +++ S LI  A + N  HG+K+    P I+HL FADDS
Sbjct: 17   YFYPQRGLRQGDPLSPYLFIICADVLSGLITKAHTENLLHGVKIAPTAPEITHLFFADDS 76

Query: 235  IIFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQ 414
            I+FC A++A+   +  ++  Y + SGQLVN+ K             K  I Q L    ++
Sbjct: 77   IMFCRATIAETTKMKALITTYQQASGQLVNYNKSELIFSKKVSQSTKLEIQQILPMPIVE 136

Query: 415  KSCRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVM 594
               +YLG P   GRSK +VFNY+ D + K++  WK   LS AG+  L+++V +A+P ++M
Sbjct: 137  HFAKYLGQPTHFGRSKTQVFNYIQDKIWKKLKGWKEKNLSFAGRGTLIKAVAQAIPTYLM 196

Query: 595  SCFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNES 774
            SC+ LP G+C  +  +   FWWG S    +K HW  W      +++GG+ F DL  FNE+
Sbjct: 197  SCYLLPKGLCNHMESMICRFWWG-SNVDQRKIHWVNWKKTCKQKKQGGMGFRDLTTFNEA 255

Query: 775  LMAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRL 954
            L++KQ WR++T+P+ L+  ++K+KYFP+   L+A     AS+ W+S  +A  VL  G   
Sbjct: 256  LLSKQGWRILTEPNSLVATVMKAKYFPHTQFLQAKKSHRASYTWQSIQKASWVLKKGCYW 315

Query: 955  EIGDGQKIKIWQHPWLPKLNG---FTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
             +G+G +I IW+  W+ K  G   +TPK   P T     V DL   D  +W+E L+K+ F
Sbjct: 316  LVGNGDQINIWEDRWIHKQVGSNIWTPK---PNTTTLNKVKDLIVPDSNTWDEPLIKQNF 372


>ref|XP_024199817.1| uncharacterized protein LOC112203016 [Rosa chinensis]
          Length = 931

 Score =  296 bits (758), Expect = 9e-89
 Identities = 145/358 (40%), Positives = 225/358 (62%), Gaps = 2/358 (0%)
 Frame = +1

Query: 58   ILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSI 237
            I+PSRG+RQGDP+SPYLFI+ SE  S+LI+ A S N   G+ +C   P + HLLFADDSI
Sbjct: 574  IIPSRGIRQGDPLSPYLFILCSEGLSALISKAVSTNVIQGITMCPRAPTLHHLLFADDSI 633

Query: 238  IFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQK 417
            +F  A+  +     +IL+ Y K SGQ VNFEK            D      AL G+K  K
Sbjct: 634  LFGTATREECSNFKKILDTYEKASGQKVNFEKSSVVFSNNVAP-DTQVALAALLGVKCVK 692

Query: 418  SC-RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVM 594
               RYLGLP+ IG+SK  +F Y+ + + K++++WK+  LS+AGK+IL+++V + +P++ M
Sbjct: 693  EHDRYLGLPMRIGKSKTAIFAYLKERLTKKLVSWKAKILSSAGKEILIKAVAQTMPLYAM 752

Query: 595  SCFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNES 774
            +C+ LP G+C  I+QL ++F+WG ++   K+ HW++W+ L L +QEGG+ F ++  +N +
Sbjct: 753  NCYLLPKGLCDDIHQLCASFFWGDTDDR-KRIHWRSWERLCLTKQEGGMGFKNIYAYNLA 811

Query: 775  LMAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRL 954
            ++AKQ WRL+T PD L+ ++ K++YFPNC   EA +    S+ W+S ++ R  L  G++ 
Sbjct: 812  MLAKQGWRLITNPDSLIAQLYKARYFPNCSFWEAELGDSPSFSWRSIIQGRSTLHAGVKW 871

Query: 955  EIGDGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKM-VCDLFNVDGVSWNETLVKKVF 1125
             IGDG+++ IWQ  W+P  + +    I+    C  + V DL   +   W   L++  F
Sbjct: 872  RIGDGRQVHIWQDNWVPNCHKY---LIQKPAECNVLHVSDLIETETRQWKTALIRNTF 926


>gb|KMS98119.1| hypothetical protein BVRB_4g095640 [Beta vulgaris subsp. vulgaris]
          Length = 449

 Score =  284 bits (726), Expect = 9e-89
 Identities = 135/318 (42%), Positives = 208/318 (65%), Gaps = 1/318 (0%)
 Frame = +1

Query: 55   YILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDS 234
            +I+PSRGLRQGDP+SPYLF++ +E FS+L++ AA +   HG ++CR+GP ISHL FADDS
Sbjct: 106  HIIPSRGLRQGDPLSPYLFLLCAEAFSALLSKAADDGRIHGARVCRSGPRISHLFFADDS 165

Query: 235  IIFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIK-L 411
            I+F  A++ +  ++ EIL  Y + SGQ +NF+K             +  I ++L G++ +
Sbjct: 166  ILFSRATLQECSVVAEILSTYERASGQKINFDKSEVSFSKHVDTNRRVAI-RSLFGVREV 224

Query: 412  QKSCRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFV 591
            +K  +YLGLP  IGRSKK +F+ + + V K++  WK   LS AGK++LL+++I+++P ++
Sbjct: 225  EKHEKYLGLPTVIGRSKKVIFSVLKERVWKKLQGWKEKLLSRAGKEVLLKAIIQSIPTYM 284

Query: 592  MSCFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNE 771
            MS F +P  I   IN + S FWWG + G  +K HW +W+ L LP+  GG+ F DLK+FN+
Sbjct: 285  MSLFAVPDCILNEINAMCSRFWWG-ARGTERKMHWVSWEKLCLPKSYGGMGFRDLKVFNQ 343

Query: 772  SLMAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLR 951
            +L+AKQ WRL+   + L   ++K++YFP      A      S++W+S   A+ +L  GL+
Sbjct: 344  ALLAKQGWRLLCDTNSLAHLVMKARYFPRTLFTSARRGFDPSYVWRSIWGAKALLLEGLK 403

Query: 952  LEIGDGQKIKIWQHPWLP 1005
              +GDG  I +W+  WLP
Sbjct: 404  WRVGDGNSINVWEDSWLP 421


>gb|PNX99664.1| ribonuclease H, partial [Trifolium pratense]
          Length = 940

 Score =  296 bits (758), Expect = 1e-88
 Identities = 140/319 (43%), Positives = 200/319 (62%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RGLRQGDP+SPYLFI+ +++ S LI  A      HG+K   + P I+HLLFADDS+ F
Sbjct: 609  PQRGLRQGDPLSPYLFILCADVLSGLITQAQQKTLIHGVKSAPSAPEITHLLFADDSLFF 668

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
            C A+  +   +  I+  Y K SGQLVN  K             +  I Q L   +++   
Sbjct: 669  CRANKEEINNIKNIILDYQKASGQLVNMTKSELIFSKKVPENVQLEITQILPMKRVEHFS 728

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            +YLG+P  IGRSK +VFN++LD V K++  WK   LS AG+  L+++V++A+P ++MSCF
Sbjct: 729  KYLGMPTDIGRSKHQVFNHILDRVWKKLKGWKEKHLSFAGRSTLIKAVVQAIPTYIMSCF 788

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
             LP G+CK +  +A NFWWG S    KK HW  W  +   + +GGL F +  +FNE+L+A
Sbjct: 789  LLPKGLCKQLESMACNFWWG-SNTDKKKIHWINWKKICKNKFQGGLGFRNTCMFNEALLA 847

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            KQ WR+ TQPD L+ ++ K+KYFP C  +EA   +  S+ W+S ++AR +L  G    IG
Sbjct: 848  KQGWRIATQPDSLVARVFKAKYFPKCHFMEAKSGNSISYTWRSILQARWILKKGCYWTIG 907

Query: 964  DGQKIKIWQHPWLPKLNGF 1020
            +G+++KIW+  WLP  NGF
Sbjct: 908  NGKQVKIWKDNWLPHQNGF 926


>ref|XP_023909336.1| uncharacterized protein LOC112020997 [Quercus suber]
          Length = 1369

 Score =  301 bits (771), Expect = 1e-88
 Identities = 142/358 (39%), Positives = 221/358 (61%), Gaps = 2/358 (0%)
 Frame = +1

Query: 58   ILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSI 237
            I P RGLRQGDP+SPYLF++ +E   +LI  AA+N +  G+ LCR GP ++HLLFADDS+
Sbjct: 635  IHPQRGLRQGDPLSPYLFLLCAEGLHALIKQAATNGTISGVSLCREGPRVTHLLFADDSL 694

Query: 238  IFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQK 417
            + C+A+  +   + E+LEKY + SGQ +N +K             +++I  +L      +
Sbjct: 695  LLCKANSRECNSVLELLEKYERASGQRINRDKTQLFFSSNTNQQTRNSIKSSLGVAVSHQ 754

Query: 418  SCRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMS 597
              +YLGLP  +GR KK+ F+Y+ + + ++I  WK   LS AGK++L++S+++A+P + M+
Sbjct: 755  LDKYLGLPSFVGRGKKQSFSYIRERIWQKIQGWKEKLLSQAGKEVLIKSILQAMPTYSMN 814

Query: 598  CFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESL 777
            CFKLP  +CK I  L   FWWG+  G  +K HW AW+ + LP+ +GGL F D++ FN +L
Sbjct: 815  CFKLPRSLCKDIESLIRKFWWGY-RGEQRKTHWVAWNKMCLPKCQGGLGFRDIENFNLAL 873

Query: 778  MAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLE 957
            + KQ+WRL+   D L  K+ K+++FPNC +++ G+ +  S+ W+S ++AR+V+  G    
Sbjct: 874  LGKQVWRLLHNQDSLFYKVFKARFFPNCSIMDEGVKTNGSYAWQSILQARKVVDMGSYWR 933

Query: 958  IGDGQKIKIWQHPWLPKLNGFTPKCIEPVT--PCPKMVCDLFNVDGVSWNETLVKKVF 1125
            IGDG+ + I    WLP       K + P    P    VC L N +G SW+   ++  F
Sbjct: 934  IGDGRSVLIRGDKWLP--GSHHSKVLSPQNHFPMNMKVCALLNENGTSWDADRIRSEF 989


>gb|PNX72264.1| ribonuclease H [Trifolium pratense]
          Length = 854

 Score =  293 bits (749), Expect = 5e-88
 Identities = 145/359 (40%), Positives = 219/359 (61%), Gaps = 5/359 (1%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RGLRQGDP+SPYLFI+ +++ S LI+ AA++   HG+K+ R  P +SHL FADDS++F
Sbjct: 116  PERGLRQGDPLSPYLFILCADVLSGLIHKAANSKEIHGIKVARTAPRLSHLFFADDSLLF 175

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
              AS  +A  +  IL  Y + SGQ+VN +K            DK  IC  +    ++   
Sbjct: 176  SRASSHEASTILNILATYEQASGQMVNLDKSEASFSRNVRIEDKDMICNMMGAKAVEAHS 235

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            RYLG P+  GRSKK VF++V+D V K++  WK  FLS AGK+ L+++V +A+P +++SC+
Sbjct: 236  RYLGFPIPFGRSKKAVFSFVMDRVWKKVKGWKERFLSRAGKETLIKAVAQAIPNYILSCY 295

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
            K+P G CK I+ + + FWWG +E   +K HW +W+ LS  + +GG+ F  ++ FN++L+ 
Sbjct: 296  KMPVGCCKDIDSMLAKFWWGSNEER-RKIHWMSWERLSKAKLDGGMGFRGMEDFNKALLG 354

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            K  WRLVT    L+ K+LKS+Y+P  + L A      S+ W+S + AR ++  G   +IG
Sbjct: 355  KHCWRLVTGESSLLEKVLKSRYYPRGNFLCAKEGYQPSYGWRSILSARDLVTKGGVWKIG 414

Query: 964  DGQKIKIWQHPWLPKLNGFTPKCIE---PVTPCPK--MVCDLFNVDGVSWNETLVKKVF 1125
            +G  ++IW+  W+  L     KCIE   P  P P+  +V DL +VD   W   ++   F
Sbjct: 415  NGSNVRIWKDTWMADL-----KCIESRGPNCPLPEDALVSDLIDVDTKQWKRDMIFSCF 468


>gb|PNX80752.1| ribonuclease H, partial [Trifolium pratense]
          Length = 696

 Score =  289 bits (739), Expect = 6e-88
 Identities = 142/356 (39%), Positives = 211/356 (59%), Gaps = 2/356 (0%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RGLRQGDP+SPYLFI+ +++ S L+   A     HG+K+ R  P ISHLLFADDS++F
Sbjct: 190  PERGLRQGDPLSPYLFILCADVLSGLMKRKAVTGGIHGIKIARQAPKISHLLFADDSLLF 249

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
              AS  +A ++  +L +Y + SGQ+VN +K            +K  I   +    +    
Sbjct: 250  ARASSTEADVILSVLAEYQQASGQVVNLDKSEVSFSQNVRNEEKEMIRNRMGVKTVDNHS 309

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            +YLGLP+  GRSKK +F+ V+D V K++  WK N+LS AGK+IL+++V +A+P ++MSC+
Sbjct: 310  KYLGLPVVFGRSKKLIFSLVIDRVWKKVKGWKENYLSRAGKEILIKAVAQAIPNYIMSCY 369

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
            KLP   C+ I  + + FWWG S+ G +K HW +W+ LS  ++ GG+ F  +  FN +L+ 
Sbjct: 370  KLPESCCQEIESMLAKFWWG-SKEGKRKIHWMSWERLSKSKKGGGMGFRGISNFNSALLG 428

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            K  WRL T  + LM ++ KS+Y+P    +EA I    S+ W+S   A+ V+  G R  IG
Sbjct: 429  KHCWRLTTGEESLMGRVFKSRYYPRASFMEAKIGYQPSYAWRSIQSAKEVIILGSRWRIG 488

Query: 964  DGQKIKIWQHPWLPKLNGFT--PKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
            +G+K+KI +  WLP   GF    +C E       +V  L + D   W   LV  +F
Sbjct: 489  NGEKVKICKDKWLPNQVGFKVWSRCDELEEDA--LVSTLIDPDTKQWKRDLVSHIF 542


>ref|XP_019190015.1| PREDICTED: uncharacterized protein LOC109184468 [Ipomoea nil]
          Length = 666

 Score =  288 bits (737), Expect = 6e-88
 Identities = 133/315 (42%), Positives = 199/315 (63%)
 Frame = +1

Query: 58   ILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSI 237
            I+PSRGLRQGDP+SPYLFII +E  S L+  A    + HG ++ R  P ISHL FADDS+
Sbjct: 36   IIPSRGLRQGDPLSPYLFIICAEGLSLLLQQAQIQGAIHGCRVARGAPSISHLFFADDSL 95

Query: 238  IFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQK 417
            +F +A+V +A  + + L +Y  +SGQ+VN+ K             +  + Q L   +   
Sbjct: 96   LFFKANVQEASAIKQCLTRYENLSGQVVNYHKSSICYSKNTQDDSREEVAQILGVTQAPN 155

Query: 418  SCRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMS 597
              +YLGLP  +GR+KK  F+Y+ D +++RIL+W    LS AGK++LL+SV +A+P F MS
Sbjct: 156  FGKYLGLPSFVGRNKKAAFSYIEDKIRQRILSWNKKLLSQAGKEVLLKSVAQAMPTFSMS 215

Query: 598  CFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESL 777
             F LP GIC  I +  + +WWG   G  +  HWKAWD L +P++ GGL F +L  FN ++
Sbjct: 216  VFLLPMGICTAIERTMNRYWWG--SGNERGIHWKAWDKLCIPKKYGGLGFKELHAFNIAM 273

Query: 778  MAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLE 957
            + KQ WRL+T+PD L+ ++ +++Y+P     +A + +  S+ W+S M A+ ++ +G R  
Sbjct: 274  LGKQAWRLLTKPDSLVSRVYRARYYPKGAFYDAKVGNNPSFCWRSIMAAQSMICSGTRCR 333

Query: 958  IGDGQKIKIWQHPWL 1002
            IG+G+   IW HPWL
Sbjct: 334  IGNGKTTLIWDHPWL 348


>gb|PNY14023.1| ribonuclease H [Trifolium pratense]
          Length = 434

 Score =  280 bits (717), Expect = 1e-87
 Identities = 135/354 (38%), Positives = 207/354 (58%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RG+RQGDP+SPYLFII +++ S L+  A +    HG+K+    P ISHLLFADDS++F
Sbjct: 34   PQRGIRQGDPLSPYLFIICADVLSGLLTKAQNERIIHGVKIAPGAPEISHLLFADDSLLF 93

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
            C A+  +   ++ I++ Y + SGQLVN  K             K++I + L    L    
Sbjct: 94   CRATTKEVTAISNIIQTYQEASGQLVNLTKSEMVFSKGIPNATKNDISKILPMQILDHFS 153

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            +YLG+P  IGRSK +VFN++ + + K++  WK   LS AG+ IL++ V +A+P ++MS F
Sbjct: 154  KYLGMPTFIGRSKNQVFNFLQEKIWKKLKGWKERNLSFAGRGILIKVVAQAIPTYIMSSF 213

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
             LP  +C  + ++  NFWWG S    +K HW  W  +   ++ GGL F  L+ FNE+L+A
Sbjct: 214  LLPKEVCAQMEKMICNFWWG-SSTDTRKIHWINWQKICRQKKTGGLGFRQLRAFNEALLA 272

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            KQ WR+++QP  LM ++LK+KYFP    L+A      S+ W+S ++AR ++  G    IG
Sbjct: 273  KQGWRIISQPSSLMAQVLKAKYFPKDHFLQAKPKQQMSYTWRSILQARWIIKKGCYWTIG 332

Query: 964  DGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
             G+ + IW+  W+ +    +    +P       V D+ N     WNE L+ ++F
Sbjct: 333  SGKDVDIWKDNWIHQKGNSSTWSSKPNLSTHHKVQDIMNTHNNRWNEALINQLF 386


>ref|XP_021762976.1| uncharacterized protein LOC110727703 [Chenopodium quinoa]
          Length = 483

 Score =  282 bits (721), Expect = 1e-87
 Identities = 140/348 (40%), Positives = 209/348 (60%)
 Frame = +1

Query: 58   ILPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSI 237
            + P+RGLRQGDPISPYLF++ +E FSSL+  AA++N   G ++CR  P ISH+ FADDSI
Sbjct: 107  VSPARGLRQGDPISPYLFLMCAEAFSSLLVKAANDNLISGARVCRGAPKISHIFFADDSI 166

Query: 238  IFCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQK 417
            +F  A+  +   +  I+  Y + SGQL+NF+K             +  I   L   ++ +
Sbjct: 167  LFARATTEECSKIVSIISTYERASGQLINFDKSEVSFSKNVRADRRYEIISLLRVKQVSR 226

Query: 418  SCRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMS 597
              +YLGLP  IGRSKK VF+ + +   K++  WK   LS AGK+IL+++V +A+PV++M 
Sbjct: 227  HEKYLGLPTIIGRSKKAVFSCLKEREWKKLQGWKERLLSQAGKEILIKAVAQAIPVYMMG 286

Query: 598  CFKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESL 777
             F++P  +   IN + + FWWG S G  +K HW +W  L LP+Q GG+ F DL  FN++L
Sbjct: 287  LFRIPDCVLNEINSMIAKFWWG-SRGSERKIHWVSWKKLCLPKQLGGMGFRDLGTFNQAL 345

Query: 778  MAKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLE 957
            +AKQ WRL+     L+  +LK++YF N + + A      S++W+S   A+ +L  GLR  
Sbjct: 346  LAKQGWRLLNDSKSLVYSVLKARYFKNGEFISAPRGYDPSFVWRSIWGAKSLLVDGLRWR 405

Query: 958  IGDGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWN 1101
            +GDG++I +W+  WLP  N          +P   MV DL + D   W+
Sbjct: 406  VGDGRRINVWEEGWLPTENTARAPSPNIDSPDDLMVADLIDHDQGCWD 453


>gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]
          Length = 916

 Score =  292 bits (747), Expect = 3e-87
 Identities = 141/354 (39%), Positives = 210/354 (59%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RGLRQGDP+SPYLFII +++ S LI  A  +   HG+ +C   P ISHL FADDS++F
Sbjct: 272  PQRGLRQGDPLSPYLFIICADVLSGLITKAQQDKLIHGVMICHEAPEISHLFFADDSLVF 331

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
            C A+  +   +  I++ Y   SGQLVNF K             + +I   L    L +  
Sbjct: 332  CRANTKEVSTIQNIIQIYQNASGQLVNFSKSEMVFSKGVSNQIQRDISNILPMKILNQFS 391

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            +YLG+P+ +GRSKK++FN++ + + K++  WK   LS AG+  L+++V +A+P ++MS F
Sbjct: 392  KYLGMPVALGRSKKQIFNFIQEKIWKKLKGWKEKHLSFAGRGTLIKAVAQAIPTYLMSSF 451

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
             LP G+C  + ++  NFWWG S    +K HW  W  +   + EGG+ F DL+ FNE+L+A
Sbjct: 452  LLPKGVCDQLEKMICNFWWGSSTDH-RKIHWIKWSTVCKHKMEGGIGFRDLRAFNEALLA 510

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            KQ WRL+TQPD L+ KILK+KY+P  + L+A      S+ WKS ++A  V+  G    IG
Sbjct: 511  KQGWRLITQPDSLVAKILKAKYYPKGEFLKASHKQQMSYTWKSILQASWVIKRGSYWTIG 570

Query: 964  DGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
             GQ I IW+  W+ +    T    +P       V +L + +   WN T++ ++F
Sbjct: 571  SGQGINIWEDNWIQQKGNPTSTISKPNNCGLIKVKELMDDNYNDWNVTIINQIF 624


>gb|PNX92808.1| ribonuclease H [Trifolium pratense]
          Length = 930

 Score =  291 bits (746), Expect = 5e-87
 Identities = 149/359 (41%), Positives = 216/359 (60%), Gaps = 4/359 (1%)
 Frame = +1

Query: 61   LPSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSII 240
            +P RGLRQGDP+SPYLFII + +FS L+  A +    HG+K+    P +SHLLFADDS++
Sbjct: 188  IPQRGLRQGDPLSPYLFIICANVFSGLLTKAQTERRIHGVKVAHGAPEVSHLLFADDSLL 247

Query: 241  FCEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKS 420
            FC+A+V +A ++  I+ +Y + SGQLVN EK             K NI   L   ++   
Sbjct: 248  FCKATVQEATVIKNIILEYQEASGQLVNMEKSEIVYSRHVPHQIKENIGHILPMKRVNHF 307

Query: 421  CRYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSC 600
             +YLG+P  +GRSK++VF+Y+ D V K+I  WK+  LS AG+  L+++V +A+P +VMSC
Sbjct: 308  SKYLGMPTHVGRSKRQVFDYIQDCVWKKIKGWKAQHLSFAGRSTLIKAVAQAIPTYVMSC 367

Query: 601  FKLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLM 780
            F LP  +C  I  +   FWWG S    +K HW  W  +   +++GGL+F +L+ FNE+L+
Sbjct: 368  FLLPKELCSHIESMICKFWWG-SNNDKRKIHWIKWSTICKHKKKGGLSFRELRAFNEALL 426

Query: 781  AKQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPS-GASWLWKSWMEARRVLATGLRLE 957
            AKQ WR +TQP+ ++ ++LK+KY+P   LLEA I S   S+ W+S  +A  +L  G    
Sbjct: 427  AKQGWRCITQPNSMVAQVLKAKYYPKTTLLEADIGSKNVSYTWRSISKASWILKKGGLWN 486

Query: 958  IGDGQKIKIWQHPWLPKLNG---FTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
            IG+G    IW   WLP+  G   ++PK     T     V DL   +  SWN  L+   F
Sbjct: 487  IGNGATTNIWTDNWLPRQQGHKIWSPKGEATQT----WVKDLMIPEIRSWNRQLIFDTF 541


>gb|PNY15111.1| ribonuclease H [Trifolium pratense]
          Length = 1334

 Score =  296 bits (758), Expect = 7e-87
 Identities = 145/354 (40%), Positives = 212/354 (59%)
 Frame = +1

Query: 64   PSRGLRQGDPISPYLFIIVSEIFSSLINVAASNNSFHGLKLCRNGPFISHLLFADDSIIF 243
            P RGLRQGDP+SPYLFI+ +++ S L+   A   S HG+++ R  P ISHL FADDS++F
Sbjct: 604  PERGLRQGDPLSPYLFILCADVLSGLVKKQAETGSMHGIQIARQAPKISHLFFADDSLLF 663

Query: 244  CEASVAQAGILNEILEKYNKISGQLVNFEKXXXXXXXXXXXXDKSNICQALHGIKLQKSC 423
              AS A+AG++  +L +Y K SGQ+VN +K            DK  I   +    +    
Sbjct: 664  ARASAAEAGVILNVLAEYQKASGQVVNLDKSEVSFSQNVRNEDKDMIRNRMGVKTVDTHS 723

Query: 424  RYLGLPLGIGRSKKEVFNYVLDAVQKRILNWKSNFLSTAGKDILLRSVIEALPVFVMSCF 603
            +YLGLP+  GRSKK +F++V+D V K++  WK   LS AGK+IL+++V +A+P ++M C+
Sbjct: 724  KYLGLPVVFGRSKKIIFSFVIDRVWKKLKGWKEKCLSRAGKEILIKAVAQAIPNYIMGCY 783

Query: 604  KLPSGICKGINQLASNFWWGFSEGGVKKAHWKAWDLLSLPRQEGGLNFHDLKLFNESLMA 783
            KLP+  C+ I  + + FWWG S+GG +K HW +W+ LS  +++GG+ F  +  FN++L+ 
Sbjct: 784  KLPNSCCQEIETMLAKFWWG-SKGGERKIHWMSWERLSKTKKDGGMGFRGINNFNKALLG 842

Query: 784  KQLWRLVTQPDLLMCKILKSKYFPNCDLLEAGIPSGASWLWKSWMEARRVLATGLRLEIG 963
            K  WRL+T  + LM +I KS+YFP    LEA I    S+ W+S   A  V+  G R  IG
Sbjct: 843  KHCWRLMTGEESLMGRIFKSRYFPRTSFLEAKIGYQPSYAWRSIQSATDVMKLGTRWRIG 902

Query: 964  DGQKIKIWQHPWLPKLNGFTPKCIEPVTPCPKMVCDLFNVDGVSWNETLVKKVF 1125
            +G+ +KI +  WLP   GF             +V  L + D   WN  LV + F
Sbjct: 903  NGESVKIREDRWLPNQVGFKVWSRGEELENGALVSALIDPDTKQWNRQLVVQTF 956