BLASTX nr result

ID: Rehmannia32_contig00021126 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00021126
         (448 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094311.1| rho GTPase-activating protein 5 [Sesamum ind...    99   3e-21
ref|XP_022899251.1| rho GTPase-activating protein 5-like [Olea e...    61   7e-08
ref|XP_011077854.1| rho GTPase-activating protein 5 [Sesamum ind...    55   7e-06

>ref|XP_011094311.1| rho GTPase-activating protein 5 [Sesamum indicum]
          Length = 502

 Score = 99.0 bits (245), Expect = 3e-21
 Identities = 66/120 (55%), Positives = 75/120 (62%), Gaps = 21/120 (17%)
 Frame = +2

Query: 62  PKTGSNETHGSLSSIENIFQDGKGHVAD-----ILNSRGAMKDGVTEGGNNTSLGSGRTK 226
           PKT  N+TH  LSS ENI  D K H AD     I N RG  KDG+ EGGN TS+GSGRT+
Sbjct: 387 PKT-DNKTHDFLSSTENILPDAKEHAADNGSVDIPNCRGTTKDGL-EGGN-TSMGSGRTQ 443

Query: 227 SRIRMRKKNGQPSSS---KKGSRKHNPGSVVHVNEKF-------------SHTERWEAWR 358
           SRIR R K+GQPS+S   KKGS++H P +VVH NE               SHTER EAWR
Sbjct: 444 SRIR-RTKSGQPSNSNSVKKGSKRHTPRAVVHANETAEKNKEISIISRVNSHTERAEAWR 502


>ref|XP_022899251.1| rho GTPase-activating protein 5-like [Olea europaea var.
           sylvestris]
          Length = 494

 Score = 60.8 bits (146), Expect = 7e-08
 Identities = 50/113 (44%), Positives = 59/113 (52%), Gaps = 18/113 (15%)
 Frame = +2

Query: 74  SNETHGSLSSIENIFQDGKGHVA-----DILNSRGAMKDGVTEGGNNTSLGSGRTKSRIR 238
           SNET   LSSIENI  DGK + A     D++ +    KD V  GG NTS  S  ++S+ R
Sbjct: 387 SNETPCFLSSIENILPDGKENAAMTCPGDMMKNADLTKDRV--GGGNTSARSRPSQSKSR 444

Query: 239 MRKKNGQPSSSKKGSRKHNPGSVVHVNEKF-------------SHTERWEAWR 358
            R K GQP  SK G++K    SVVHV E               S TER EAWR
Sbjct: 445 -RTKTGQP--SKNGAKKVIQPSVVHVPENSEKSKEKSITSLLNSQTERVEAWR 494


>ref|XP_011077854.1| rho GTPase-activating protein 5 [Sesamum indicum]
          Length = 492

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 44/110 (40%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
 Frame = +2

Query: 77  NETHGSLSSIENIFQDGKGHVADILNSRGAMKDGVTEGGNNTSLGSGRTKSRIRMRKKNG 256
           NE H  LSSIENI        AD+ NS G  KD V   G NT+   GRT+ R+ +R K  
Sbjct: 392 NEPHRFLSSIENILP------ADVPNSLGTTKDRV--DGGNTANSVGRTQPRL-LRAKTS 442

Query: 257 QPSS---SKKGSRKHNPGSVVHVNE-------------KFSHTERWEAWR 358
           Q S+   +K GSRK  P  VV V++             + S+ ER E WR
Sbjct: 443 QTSNANDAKNGSRKRAPSPVVRVSKSAEKTKEPNVISRENSYAERVEVWR 492


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