BLASTX nr result
ID: Rehmannia32_contig00021012
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00021012
(478 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_021278543.1| transcription initiation factor IIB-like, pa... 108 1e-26
gb|OMO54500.1| Transcription factor TFIIB [Corchorus olitorius] 110 4e-26
gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao] 108 2e-25
ref|XP_012090035.1| transcription initiation factor IIB isoform ... 107 6e-25
ref|XP_018825511.1| PREDICTED: transcription initiation factor I... 107 6e-25
ref|XP_007015120.2| PREDICTED: transcription initiation factor I... 107 6e-25
ref|XP_012090034.1| transcription initiation factor IIB isoform ... 107 6e-25
ref|XP_022756708.1| transcription initiation factor IIB-like iso... 105 2e-24
ref|XP_021593173.1| transcription initiation factor IIB isoform ... 105 2e-24
ref|XP_021593172.1| transcription initiation factor IIB isoform ... 105 4e-24
gb|OVA10862.1| Transcription factor TFIIB [Macleaya cordata] 104 6e-24
gb|ONK71418.1| uncharacterized protein A4U43_C04F8350 [Asparagus... 101 7e-24
ref|XP_021682939.1| transcription initiation factor IIB [Hevea b... 103 9e-24
ref|XP_010269721.1| PREDICTED: transcription initiation factor I... 103 1e-23
ref|XP_011090131.1| transcription initiation factor IIB-2-like [... 103 2e-23
ref|XP_022756709.1| transcription initiation factor IIB-like iso... 102 2e-23
gb|PPD76953.1| hypothetical protein GOBAR_DD26110 [Gossypium bar... 100 2e-23
ref|XP_002277679.1| PREDICTED: transcription initiation factor I... 102 3e-23
ref|XP_021894119.1| transcription initiation factor IIB-like [Ca... 102 3e-23
ref|XP_023881775.1| transcription initiation factor IIB-like [Qu... 102 4e-23
>ref|XP_021278543.1| transcription initiation factor IIB-like, partial [Herrania
umbratica]
Length = 199
Score = 108 bits (270), Expect = 1e-26
Identities = 56/76 (73%), Positives = 58/76 (76%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHP A K+V
Sbjct: 124 SEELDIRRSPISIAAAVIYIITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKLV 183
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKEEDL+ LCSP
Sbjct: 184 PSWYAKEEDLKNLCSP 199
>gb|OMO54500.1| Transcription factor TFIIB [Corchorus olitorius]
Length = 312
Score = 110 bits (274), Expect = 4e-26
Identities = 57/76 (75%), Positives = 58/76 (76%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD +TQLSDDKKLLKDISLATGVAEGTIRNSYKDLHP A KIV
Sbjct: 237 SEELDVRRSPISIAAAVIYIVTQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKIV 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKEEDLR LCSP
Sbjct: 297 PSWYAKEEDLRTLCSP 312
>gb|EOY32739.1| Cyclin-like family protein [Theobroma cacao]
Length = 312
Score = 108 bits (270), Expect = 2e-25
Identities = 56/76 (73%), Positives = 58/76 (76%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHP A K+V
Sbjct: 237 SEELDIRRSPISIAAAVIYIITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKLV 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKEEDL+ LCSP
Sbjct: 297 PSWYAKEEDLKNLCSP 312
>ref|XP_012090035.1| transcription initiation factor IIB isoform X2 [Jatropha curcas]
Length = 308
Score = 107 bits (266), Expect = 6e-25
Identities = 54/76 (71%), Positives = 59/76 (77%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDISLATGVAEGTIRNSYKDL+P+A +I+
Sbjct: 233 SEELDIRRSPISIAAAIIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRII 292
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKE+DLR LCSP
Sbjct: 293 PSWYAKEDDLRNLCSP 308
>ref|XP_018825511.1| PREDICTED: transcription initiation factor IIB [Juglans regia]
Length = 312
Score = 107 bits (266), Expect = 6e-25
Identities = 53/76 (69%), Positives = 59/76 (77%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDIS+ATGVAEGTIRNSYKDL+P+A +++
Sbjct: 237 SEELDIRRSPISVAAAVIYIITQLSDDKKLLKDISVATGVAEGTIRNSYKDLYPYATRLI 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKEEDLR LCSP
Sbjct: 297 PSWYAKEEDLRNLCSP 312
>ref|XP_007015120.2| PREDICTED: transcription initiation factor IIB [Theobroma cacao]
Length = 312
Score = 107 bits (266), Expect = 6e-25
Identities = 55/76 (72%), Positives = 58/76 (76%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHP A K+V
Sbjct: 237 SEELDIRRSPISIAAAVIYIITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKLV 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAK+EDL+ LCSP
Sbjct: 297 PSWYAKKEDLKNLCSP 312
>ref|XP_012090034.1| transcription initiation factor IIB isoform X1 [Jatropha curcas]
gb|KDP22116.1| hypothetical protein JCGZ_25947 [Jatropha curcas]
Length = 312
Score = 107 bits (266), Expect = 6e-25
Identities = 54/76 (71%), Positives = 59/76 (77%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDISLATGVAEGTIRNSYKDL+P+A +I+
Sbjct: 237 SEELDIRRSPISIAAAIIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRII 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKE+DLR LCSP
Sbjct: 297 PSWYAKEDDLRNLCSP 312
>ref|XP_022756708.1| transcription initiation factor IIB-like isoform X1 [Durio
zibethinus]
Length = 312
Score = 105 bits (263), Expect = 2e-24
Identities = 55/76 (72%), Positives = 57/76 (75%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHP A K+V
Sbjct: 237 SEELDIRRSPISIAAAVIYIITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKLV 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAK EDL+ LCSP
Sbjct: 297 PSWYAKVEDLKNLCSP 312
>ref|XP_021593173.1| transcription initiation factor IIB isoform X2 [Manihot esculenta]
Length = 312
Score = 105 bits (262), Expect = 2e-24
Identities = 53/76 (69%), Positives = 59/76 (77%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLS+DKKLLKDISLATGVAEGTIRNSYKDL+P+A +I+
Sbjct: 237 SEELDIRRSPISIAAAIIYMITQLSEDKKLLKDISLATGVAEGTIRNSYKDLYPYASRII 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKE+DLR LCSP
Sbjct: 297 PSWYAKEDDLRSLCSP 312
>ref|XP_021593172.1| transcription initiation factor IIB isoform X1 [Manihot esculenta]
gb|OAY30108.1| hypothetical protein MANES_14G004200 [Manihot esculenta]
Length = 345
Score = 105 bits (262), Expect = 4e-24
Identities = 53/76 (69%), Positives = 59/76 (77%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLS+DKKLLKDISLATGVAEGTIRNSYKDL+P+A +I+
Sbjct: 270 SEELDIRRSPISIAAAIIYMITQLSEDKKLLKDISLATGVAEGTIRNSYKDLYPYASRII 329
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKE+DLR LCSP
Sbjct: 330 PSWYAKEDDLRSLCSP 345
>gb|OVA10862.1| Transcription factor TFIIB [Macleaya cordata]
Length = 309
Score = 104 bits (259), Expect = 6e-24
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSD+KKLL+DISLATGVAEGTIRNSYKDL+P+A +++
Sbjct: 234 SEELDIRRSPISVAAAVIYMITQLSDEKKLLRDISLATGVAEGTIRNSYKDLYPYATRLI 293
Query: 258 PSWYAKEEDLRQLCSP 211
P+WYAKEEDLR LCSP
Sbjct: 294 PTWYAKEEDLRNLCSP 309
>gb|ONK71418.1| uncharacterized protein A4U43_C04F8350 [Asparagus officinalis]
Length = 198
Score = 101 bits (252), Expect = 7e-24
Identities = 49/76 (64%), Positives = 58/76 (76%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLS++KKLL+DIS+ATGVAEGTIRNSYKDLHP+ KI+
Sbjct: 123 SEELDIRRSPISIAAAVIYIITQLSEEKKLLRDISVATGVAEGTIRNSYKDLHPYVAKII 182
Query: 258 PSWYAKEEDLRQLCSP 211
P+W+AKEEDL+ LCSP
Sbjct: 183 PTWFAKEEDLKNLCSP 198
>ref|XP_021682939.1| transcription initiation factor IIB [Hevea brasiliensis]
Length = 312
Score = 103 bits (258), Expect = 9e-24
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLS+DKKLLKDISL+TGVAEGTIRNSYKDL+P+A +I+
Sbjct: 237 SEELDIRRSPISIAAAIIYMITQLSEDKKLLKDISLSTGVAEGTIRNSYKDLYPYAARII 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKE+DL+ LCSP
Sbjct: 297 PSWYAKEDDLKNLCSP 312
>ref|XP_010269721.1| PREDICTED: transcription initiation factor IIB [Nelumbo nucifera]
Length = 312
Score = 103 bits (257), Expect = 1e-23
Identities = 51/76 (67%), Positives = 59/76 (77%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLL+DISLATGVAEGTIRNSYKDL+P+A +++
Sbjct: 237 SEELDIRRSPISVAAAVIYMITQLSDDKKLLRDISLATGVAEGTIRNSYKDLYPYASRLI 296
Query: 258 PSWYAKEEDLRQLCSP 211
P+W+AKEEDLR LCSP
Sbjct: 297 PNWFAKEEDLRNLCSP 312
>ref|XP_011090131.1| transcription initiation factor IIB-2-like [Sesamum indicum]
Length = 312
Score = 103 bits (256), Expect = 2e-23
Identities = 54/76 (71%), Positives = 57/76 (75%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDI LATGVAEGTIRNSYKDL+PFA KIV
Sbjct: 237 SEELDIRRSPISIAAAIIYIITQLSDDKKLLKDICLATGVAEGTIRNSYKDLYPFASKIV 296
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKE+D+R L SP
Sbjct: 297 PSWYAKEDDIRHLSSP 312
>ref|XP_022756709.1| transcription initiation factor IIB-like isoform X2 [Durio
zibethinus]
Length = 311
Score = 102 bits (255), Expect = 2e-23
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = -2
Query: 375 TQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIVPSWYAKEEDLRQLCSP 211
TQLSDDKKLLKDISLATGVAEGTIRNSYKDLHP A K+VPSWYAK EDL+ LCSP
Sbjct: 257 TQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPHASKLVPSWYAKVEDLKNLCSP 311
>gb|PPD76953.1| hypothetical protein GOBAR_DD26110 [Gossypium barbadense]
Length = 195
Score = 100 bits (248), Expect = 2e-23
Identities = 51/76 (67%), Positives = 55/76 (72%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEE D ITQLSDDKK L+DISLATGVAEGTIRNSYKDL+P KI+
Sbjct: 120 SEEFDIRRSPISIAAAVIYIITQLSDDKKPLRDISLATGVAEGTIRNSYKDLYPHLAKII 179
Query: 258 PSWYAKEEDLRQLCSP 211
PSWYAKEEDL+ LCSP
Sbjct: 180 PSWYAKEEDLKNLCSP 195
>ref|XP_002277679.1| PREDICTED: transcription initiation factor IIB [Vitis vinifera]
emb|CBI17180.3| unnamed protein product, partial [Vitis vinifera]
Length = 314
Score = 102 bits (255), Expect = 3e-23
Identities = 54/76 (71%), Positives = 58/76 (76%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDISLATGVAEGTIRNSYKDL+P+A +I+
Sbjct: 239 SEELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLATGVAEGTIRNSYKDLYPYASRII 298
Query: 258 PSWYAKEEDLRQLCSP 211
PS YAKEEDLR LCSP
Sbjct: 299 PSSYAKEEDLRNLCSP 314
>ref|XP_021894119.1| transcription initiation factor IIB-like [Carica papaya]
ref|XP_021894120.1| transcription initiation factor IIB-like [Carica papaya]
Length = 310
Score = 102 bits (254), Expect = 3e-23
Identities = 52/76 (68%), Positives = 56/76 (73%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSD+KKLLKDISLATGVAEGTIRNSYKDL+P A ++
Sbjct: 235 SEELDIRRSPISIAAAVIYMITQLSDEKKLLKDISLATGVAEGTIRNSYKDLYPHAATLI 294
Query: 258 PSWYAKEEDLRQLCSP 211
PSWY KEEDLR LCSP
Sbjct: 295 PSWYTKEEDLRNLCSP 310
>ref|XP_023881775.1| transcription initiation factor IIB-like [Quercus suber]
ref|XP_023881776.1| transcription initiation factor IIB-like [Quercus suber]
gb|POE73888.1| transcription initiation factor iib [Quercus suber]
Length = 323
Score = 102 bits (254), Expect = 4e-23
Identities = 52/76 (68%), Positives = 58/76 (76%)
Frame = -2
Query: 438 SEELDXXXXXXXXXXXXXXXITQLSDDKKLLKDISLATGVAEGTIRNSYKDLHPFAVKIV 259
SEELD ITQLSDDKKLLKDISL+TGVAEGTIRNSYKDL+P+AV+++
Sbjct: 248 SEELDIRRSPISVAAAVIYMITQLSDDKKLLKDISLSTGVAEGTIRNSYKDLYPYAVRLI 307
Query: 258 PSWYAKEEDLRQLCSP 211
PSW AKEEDL LCSP
Sbjct: 308 PSWCAKEEDLGNLCSP 323