BLASTX nr result

ID: Rehmannia32_contig00019810 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00019810
         (731 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN04091.1| RNA polymerase II, second largest subunit [Handro...   339   e-105
ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV a...   330   e-102
ref|XP_011082677.1| DNA-directed RNA polymerases IV and V subuni...   324   e-100
gb|PHT87914.1| DNA-directed RNA polymerases IV and V subunit 2 [...   266   2e-78
ref|XP_016563842.1| PREDICTED: DNA-directed RNA polymerases IV a...   266   2e-78
gb|PHU23638.1| DNA-directed RNA polymerases IV and V subunit 2 [...   265   6e-78
gb|PHT53681.1| hypothetical protein CQW23_08143 [Capsicum baccatum]   265   6e-78
ref|XP_015069884.1| PREDICTED: DNA-directed RNA polymerases IV a...   262   6e-77
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV a...   261   1e-76
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...   259   4e-76
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...   256   5e-75
ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV a...   256   5e-75
ref|XP_016481856.1| PREDICTED: DNA-directed RNA polymerases IV a...   256   1e-74
ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV a...   256   1e-74
ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV a...   255   2e-74
ref|XP_016433825.1| PREDICTED: DNA-directed RNA polymerases IV a...   255   2e-74
gb|AAY68206.1| RNA polymerase IV second largest subunit, partial...   254   3e-74
ref|XP_019252729.1| PREDICTED: DNA-directed RNA polymerases IV a...   253   9e-74
gb|OIT35183.1| dna-directed rna polymerases iv and v subunit 2 [...   251   3e-73
ref|XP_019266211.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   251   4e-73

>gb|PIN04091.1| RNA polymerase II, second largest subunit [Handroanthus
           impetiginosus]
          Length = 1208

 Score =  339 bits (869), Expect = e-105
 Identities = 164/219 (74%), Positives = 190/219 (86%), Gaps = 1/219 (0%)
 Frame = -3

Query: 654 MGAWDFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCR 478
           MG WDFLEEAGPSS +EKF+NGST+M++            DEL  A+Q LDE +LK FC+
Sbjct: 1   MGPWDFLEEAGPSSIREKFSNGSTRMDVDDDIDFDYSDSDDELDCALQDLDESFLKTFCK 60

Query: 477 KAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLK 298
           KA+T FFE+YGLISHQINSYNDFVKHGIQ++FDS+GEIT+EP +DPSKKGDGDWR ASLK
Sbjct: 61  KASTQFFEQYGLISHQINSYNDFVKHGIQKLFDSIGEITIEPGYDPSKKGDGDWRRASLK 120

Query: 297 FGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSR 118
           FGKVTLE PTF+ GEKFSSVDG +E+L+L PR+ARLQNMTYSSRIKVET LQVYT+GLSR
Sbjct: 121 FGKVTLERPTFWTGEKFSSVDGAKEYLELFPRHARLQNMTYSSRIKVETDLQVYTEGLSR 180

Query: 117 SDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           SDKFKTGV+ FV+KT+LN+YHS+V FGRLPVMVKSDLCW
Sbjct: 181 SDKFKTGVDKFVEKTLLNEYHSEVNFGRLPVMVKSDLCW 219


>ref|XP_012847152.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2
           [Erythranthe guttata]
 gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Erythranthe guttata]
          Length = 1211

 Score =  330 bits (847), Expect = e-102
 Identities = 159/219 (72%), Positives = 190/219 (86%), Gaps = 1/219 (0%)
 Frame = -3

Query: 654 MGAWDFLEEAGPSSK-EKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCR 478
           MGAWDFLEEAGPSSK +KF+NG+TQM+I            DEL +AMQ L EG+LK+ CR
Sbjct: 1   MGAWDFLEEAGPSSKNDKFSNGTTQMDIDEDIEFDSSESEDELDTAMQELSEGFLKVSCR 60

Query: 477 KAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLK 298
           KA+T+FF++YGLISHQINSYNDFV HGIQ+VFDS+GEI VEP +DPSKKG+GDW+ A LK
Sbjct: 61  KASTAFFDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKKGEGDWKRACLK 120

Query: 297 FGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSR 118
           FGKVTLE PTF+ GEKFSSVDG +++L+L PR+ARLQNMTY+++IKVETHLQVYTKGL+R
Sbjct: 121 FGKVTLERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVETHLQVYTKGLNR 180

Query: 117 SDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           SDKF TGVEN V+KT+LN+YH++V FGRLPVMVKSDLCW
Sbjct: 181 SDKFTTGVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCW 219


>ref|XP_011082677.1| DNA-directed RNA polymerases IV and V subunit 2 [Sesamum indicum]
          Length = 1207

 Score =  324 bits (831), Expect = e-100
 Identities = 158/219 (72%), Positives = 188/219 (85%), Gaps = 1/219 (0%)
 Frame = -3

Query: 654 MGAWDFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCR 478
           MGA DFLEEAGPSS  EKF+NGS +M+I            DEL S++Q LDEG+LK FC+
Sbjct: 1   MGARDFLEEAGPSSFNEKFSNGSFRMDIDDDMDFDCSDSDDELDSSLQDLDEGFLKSFCK 60

Query: 477 KAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWRYASLK 298
           KA+T+FF++YGLISHQINSYNDFV++GIQ+VFDS+GEI +EP +DPSKKGDGDWR ASLK
Sbjct: 61  KASTAFFDQYGLISHQINSYNDFVRNGIQKVFDSIGEILIEPGYDPSKKGDGDWRRASLK 120

Query: 297 FGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYTKGLSR 118
           FGKVTLE P F+ GEKFSSVDG +E+L L PR+ARLQNMTYSSRIKVETHL+V+T+ LSR
Sbjct: 121 FGKVTLEKPKFWTGEKFSSVDGAKEYLNLLPRHARLQNMTYSSRIKVETHLEVFTESLSR 180

Query: 117 SDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           SDKFKTGVE F++KT+L++YH+DV FGRLPVMVKSDLCW
Sbjct: 181 SDKFKTGVEKFIEKTLLHEYHTDVNFGRLPVMVKSDLCW 219


>gb|PHT87914.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum annuum]
          Length = 1217

 Score =  266 bits (680), Expect = 2e-78
 Identities = 138/226 (61%), Positives = 166/226 (73%), Gaps = 12/226 (5%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSA-----------MQGLDEG 499
           DF+EE G SS KEK +NGS +M+              +               M+ L EG
Sbjct: 5   DFMEEVGCSSGKEKISNGSVRMDFDIDDLFEVDDDDWDEDDGEDEDDSHDMVLMKELGEG 64

Query: 498 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 319
           +LK FC+KAAT FFEKYGLI+HQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65  FLKNFCKKAATGFFEKYGLINHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 318 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 139
           W++AS+KFGKVTLE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125 WKHASVKFGKVTLERPKFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVETHVQV 183

Query: 138 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCW 229


>ref|XP_016563842.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Capsicum annuum]
 ref|XP_016563843.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Capsicum annuum]
          Length = 1217

 Score =  266 bits (679), Expect = 2e-78
 Identities = 138/226 (61%), Positives = 166/226 (73%), Gaps = 12/226 (5%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSA-----------MQGLDEG 499
           DF+EE G SS KEK +NGS +M+              +               M+ L EG
Sbjct: 5   DFMEEVGCSSGKEKISNGSVRMDFDIDDLFEVDDDDWDEDDGEDEDDSHDMVLMKELGEG 64

Query: 498 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 319
           +LK FC+KAAT FFEKYGLI+HQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65  FLKNFCKKAATGFFEKYGLINHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 318 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 139
           W++AS+KFGKVTLE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125 WKHASVKFGKVTLERPKFWAGEKF-SVDGGKENLDLWPRHARLQNMTYSARIMVETHVQV 183

Query: 138 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCW 229


>gb|PHU23638.1| DNA-directed RNA polymerases IV and V subunit 2 [Capsicum chinense]
          Length = 1217

 Score =  265 bits (676), Expect = 6e-78
 Identities = 137/226 (60%), Positives = 166/226 (73%), Gaps = 12/226 (5%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSA-----------MQGLDEG 499
           DF+EE G SS KEK +NGS +M+              +               ++ L EG
Sbjct: 5   DFMEEVGCSSGKEKISNGSVRMDFDIDDLFEVDDDDWDEDDGEDEDDSHDMVLIKELGEG 64

Query: 498 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 319
           +LK FC+KAAT FFEKYGLI+HQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65  FLKNFCKKAATGFFEKYGLINHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 318 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 139
           W++AS+KFGKVTLE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125 WKHASVKFGKVTLERPKFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVETHVQV 183

Query: 138 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCW 229


>gb|PHT53681.1| hypothetical protein CQW23_08143 [Capsicum baccatum]
          Length = 1217

 Score =  265 bits (676), Expect = 6e-78
 Identities = 137/226 (60%), Positives = 166/226 (73%), Gaps = 12/226 (5%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGSA-----------MQGLDEG 499
           DF+EE G SS KEK +NGS +M+              +               ++ L EG
Sbjct: 5   DFMEEVGCSSGKEKISNGSVRMDFDIDDLFEVDDDDWDEDEGEDEDDSHDMVLIKELGEG 64

Query: 498 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 319
           +LK FC+KAAT FFEKYGLI+HQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65  FLKNFCKKAATGFFEKYGLINHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 318 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 139
           W++AS+KFGKVTLE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125 WKHASVKFGKVTLERPKFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVETHVQV 183

Query: 138 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCW 229


>ref|XP_015069884.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Solanum pennellii]
          Length = 1217

 Score =  262 bits (669), Expect = 6e-77
 Identities = 136/226 (60%), Positives = 165/226 (73%), Gaps = 12/226 (5%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 499
           D +EE G SS KEK +NGST+M+              +               ++ L E 
Sbjct: 5   DIMEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGES 64

Query: 498 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 319
           +LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65  FLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 318 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 139
           W++AS+KFGKVTLE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125 WKHASVKFGKVTLERPKFWAGEKF-SVDGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 138 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 YTKKLVRSDKFKTGVDRFVDKECEVEDKRDVLIGRIPVMVNSELCW 229


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 [Solanum
           lycopersicum]
          Length = 1217

 Score =  261 bits (667), Expect = 1e-76
 Identities = 136/226 (60%), Positives = 165/226 (73%), Gaps = 12/226 (5%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 499
           D +EE G SS KEK +NGST+M+              +               ++ L E 
Sbjct: 5   DIMEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGES 64

Query: 498 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 319
           +LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65  FLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 318 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 139
           W++AS+KFGKVTLE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125 WKHASVKFGKVTLERPKFWAGEKF-SVDGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 138 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 YTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCW 229


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Solanum tuberosum]
          Length = 1217

 Score =  259 bits (663), Expect = 4e-76
 Identities = 135/226 (59%), Positives = 164/226 (72%), Gaps = 12/226 (5%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEG 499
           D +EE G SS KEK +NGS +M+              +               ++ L E 
Sbjct: 5   DIMEEVGCSSGKEKISNGSARMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGET 64

Query: 498 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 319
           YLK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65  YLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 318 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 139
           W++AS+KFGKVTLE P F+AGEKFS+ DG +E+L L PR+ARLQNMTYS+RI VETH+QV
Sbjct: 125 WKHASVKFGKVTLERPKFWAGEKFSA-DGGKEYLDLLPRHARLQNMTYSARIMVETHVQV 183

Query: 138 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 YTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCW 229


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score =  256 bits (655), Expect = 5e-75
 Identities = 127/214 (59%), Positives = 165/214 (77%), Gaps = 3/214 (1%)
 Frame = -3

Query: 633 EEAGPS-SKEKFANGSTQMEIXXXXXXXXXXXXDELGSAMQGLDEGYLKMFCRKAATSFF 457
           ++ GPS SK+K  NG+T M+I            D++ +AMQ LDEG +K FCRKAATSFF
Sbjct: 2   DDVGPSTSKDKLFNGNTFMDIDEDIDFDLSDSDDDIDNAMQDLDEGVVKSFCRKAATSFF 61

Query: 456 EKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKG-DGDWRYASLKFGKVTL 280
           E++GLISHQ+NSYN+F+ HGI Q+F S+GEI VEP +DPSK+G DG+W+ ASLKFGKV L
Sbjct: 62  EQHGLISHQLNSYNNFINHGIHQLFASIGEIIVEPGYDPSKRGDDGEWQKASLKFGKVNL 121

Query: 279 EHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQ-VYTKGLSRSDKFK 103
           E P+F+ GEKFSS +G +++L+L P++ARLQNMTY++RIKVETHL+ VYT+GL RS+KF 
Sbjct: 122 ERPSFWTGEKFSSAEGAKDNLELHPKHARLQNMTYAARIKVETHLEVVYTEGLVRSEKFT 181

Query: 102 TGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           TGV   V +T L     ++ FG+LPVMV SDLCW
Sbjct: 182 TGVSTHVQRTTLKSLSLEINFGKLPVMVNSDLCW 215


>ref|XP_009787511.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform
           X1 [Nicotiana sylvestris]
          Length = 1226

 Score =  256 bits (655), Expect = 5e-75
 Identities = 138/230 (60%), Positives = 166/230 (72%), Gaps = 10/230 (4%)
 Frame = -3

Query: 660 IEMGAWDFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQG 511
           I M   D ++E G SS K K +NGS  M        E+            D L  A ++ 
Sbjct: 9   IHMTTSDIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDNLDVAPIKE 68

Query: 510 LDEGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKK 331
           L EG+LK FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFD VGEI VEP +DPSK+
Sbjct: 69  LGEGFLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKR 128

Query: 330 GDGDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVET 151
           GDGDW++AS+KFGKV+LE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VET
Sbjct: 129 GDGDWKHASVKFGKVSLERPRFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVET 187

Query: 150 HLQVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           H+QVYTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 188 HVQVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCW 237


>ref|XP_016481856.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Nicotiana tabacum]
          Length = 1220

 Score =  256 bits (653), Expect = 1e-74
 Identities = 133/228 (58%), Positives = 163/228 (71%), Gaps = 14/228 (6%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-------------AMQGLD 505
           D ++E G SS K K +NGS  M+              +                 ++ L 
Sbjct: 5   DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDDDDDNLDVGPIKELG 64

Query: 504 EGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGD 325
           EG+LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GD
Sbjct: 65  EGFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 124

Query: 324 GDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHL 145
           GDW++AS+KFGKV+LE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+
Sbjct: 125 GDWKHASVKFGKVSLERPRFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVETHV 183

Query: 144 QVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           QVYTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 QVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCW 231


>ref|XP_009605686.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2
           [Nicotiana tomentosiformis]
          Length = 1220

 Score =  256 bits (653), Expect = 1e-74
 Identities = 133/228 (58%), Positives = 163/228 (71%), Gaps = 14/228 (6%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-------------AMQGLD 505
           D ++E G SS K K +NGS  M+              +                 ++ L 
Sbjct: 5   DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDDDDDNLDVGPIKELG 64

Query: 504 EGYLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGD 325
           EG+LK FC+KA+T FFEKYGLISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GD
Sbjct: 65  EGFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGD 124

Query: 324 GDWRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHL 145
           GDW++AS+KFGKV+LE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+
Sbjct: 125 GDWKHASVKFGKVSLERPRFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVETHV 183

Query: 144 QVYTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           QVYTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 QVYTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCW 231


>ref|XP_009787512.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2 isoform
           X2 [Nicotiana sylvestris]
          Length = 1216

 Score =  255 bits (651), Expect = 2e-74
 Identities = 136/224 (60%), Positives = 164/224 (73%), Gaps = 10/224 (4%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQGLDEGYL 493
           D ++E G SS K K +NGS  M        E+            D L  A ++ L EG+L
Sbjct: 5   DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDNLDVAPIKELGEGFL 64

Query: 492 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 313
           K FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFD VGEI VEP +DPSK+GDGDW+
Sbjct: 65  KNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKRGDGDWK 124

Query: 312 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 133
           +AS+KFGKV+LE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+QVYT
Sbjct: 125 HASVKFGKVSLERPRFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYT 183

Query: 132 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           K L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 KKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCW 227


>ref|XP_016433825.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Nicotiana tabacum]
          Length = 1243

 Score =  255 bits (651), Expect = 2e-74
 Identities = 136/224 (60%), Positives = 164/224 (73%), Gaps = 10/224 (4%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQM--------EIXXXXXXXXXXXXDELGSA-MQGLDEGYL 493
           D ++E G SS K K +NGS  M        E+            D L  A ++ L EG+L
Sbjct: 5   DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDDDDNLDVAPIKELGEGFL 64

Query: 492 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 313
           K FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFD VGEI VEP +DPSK+GDGDW+
Sbjct: 65  KNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDLVGEIHVEPGYDPSKRGDGDWK 124

Query: 312 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 133
           +AS+KFGKV+LE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+QVYT
Sbjct: 125 HASVKFGKVSLERPRFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVETHVQVYT 183

Query: 132 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           K L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 KKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCW 227


>gb|AAY68206.1| RNA polymerase IV second largest subunit, partial [Solanum
           lycopersicum]
          Length = 1123

 Score =  254 bits (648), Expect = 3e-74
 Identities = 133/224 (59%), Positives = 162/224 (72%), Gaps = 12/224 (5%)
 Frame = -3

Query: 636 LEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELGS-----------AMQGLDEGYL 493
           +EE G SS KEK +NGST+M+              +               ++ L E +L
Sbjct: 1   MEEVGCSSGKEKISNGSTRMDFDIDDLFEVDDDDWDEDEDEDEDDSHDMVLIKELGESFL 60

Query: 492 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 313
           K FC+KA+T FFEKYG ISHQINSYNDF+ +GIQ+VFDSVGEI VEP +DPSK+GDGDW+
Sbjct: 61  KNFCKKASTGFFEKYGSISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKRGDGDWK 120

Query: 312 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 133
           +AS+KFGKVTLE P F+AGEKF SV G +E+L L PR+ARLQNMTYS+RI VETH+QVYT
Sbjct: 121 HASVKFGKVTLERPKFWAGEKF-SVGGGKEYLDLLPRHARLQNMTYSARIMVETHVQVYT 179

Query: 132 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           K L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 180 KKLVRSDKFKTGVDRFVDKEWEVEGKRDVLIGRIPVMVNSELCW 223


>ref|XP_019252729.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Nicotiana attenuata]
 ref|XP_019252735.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Nicotiana attenuata]
 ref|XP_019252739.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
           [Nicotiana attenuata]
 gb|OIT08688.1| dna-directed rna polymerases iv and v subunit 2 [Nicotiana
           attenuata]
          Length = 1218

 Score =  253 bits (646), Expect = 9e-74
 Identities = 132/226 (58%), Positives = 162/226 (71%), Gaps = 12/226 (5%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQMEIXXXXXXXXXXXXDELG-----------SAMQGLDEG 499
           D ++E G SS K K +NGS  M+              +             + ++ L EG
Sbjct: 5   DIMDEVGCSSGKGKISNGSAMMDFDIDDLFEVDDDDWDEDEDEDNDDNLDVAPIKELGEG 64

Query: 498 YLKMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGD 319
           +LK FC+KA+T FFEKYGLISHQINSYNDF+  GIQ+VFDSVGEI VEP +DPSK+GDGD
Sbjct: 65  FLKNFCKKASTGFFEKYGLISHQINSYNDFINFGIQRVFDSVGEIHVEPGYDPSKRGDGD 124

Query: 318 WRYASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQV 139
           W++AS+KFGKV+LE P F+AGEKF SVDG +E+L L PR+ARLQNMTYS+RI VETH+ V
Sbjct: 125 WKHASVKFGKVSLERPRFWAGEKF-SVDGGKEYLDLWPRHARLQNMTYSARIMVETHVLV 183

Query: 138 YTKGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           YTK L RSDKFKTGV+ FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 YTKKLVRSDKFKTGVDQFVDKECEMEDKRDVLIGRIPVMVNSELCW 229


>gb|OIT35183.1| dna-directed rna polymerases iv and v subunit 2 [Nicotiana
           attenuata]
          Length = 1159

 Score =  251 bits (641), Expect = 3e-73
 Identities = 133/224 (59%), Positives = 161/224 (71%), Gaps = 10/224 (4%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQ--------MEIXXXXXXXXXXXXDELG-SAMQGLDEGYL 493
           D +E+AG SS K K +NGS           E+            D L   +++ L EG+L
Sbjct: 5   DIMEDAGCSSGKGKISNGSAMTDFDIDDLFEVYDDDWDEDEDGDDNLDVDSVKELGEGFL 64

Query: 492 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 313
           K FC+KA+T FFEKYGLISHQINSYNDF+ HGIQ++FDSVGEI VEP +DP K+ DGDW+
Sbjct: 65  KNFCKKASTGFFEKYGLISHQINSYNDFINHGIQRLFDSVGEIHVEPGYDPLKRDDGDWK 124

Query: 312 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 133
           +AS+KFGKVT+E P F+AGEKF SVD  +E+L L PR+ARLQNMTYS RI VETH+QVYT
Sbjct: 125 HASVKFGKVTVERPKFWAGEKF-SVDSEKEYLDLWPRHARLQNMTYSGRIMVETHVQVYT 183

Query: 132 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           K L  SDKFKTGVE FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 KKLVSSDKFKTGVERFVDKECEKEEKRDVLVGRIPVMVNSELCW 227


>ref|XP_019266211.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerases IV and
           V subunit 2-like [Nicotiana attenuata]
          Length = 1215

 Score =  251 bits (641), Expect = 4e-73
 Identities = 133/224 (59%), Positives = 161/224 (71%), Gaps = 10/224 (4%)
 Frame = -3

Query: 642 DFLEEAGPSS-KEKFANGSTQ--------MEIXXXXXXXXXXXXDELG-SAMQGLDEGYL 493
           D +E+AG SS K K +NGS           E+            D L   +++ L EG+L
Sbjct: 5   DIMEDAGCSSGKGKISNGSAMTDFDIDDLFEVYDDDWDEDEDGDDNLDVDSVKELGEGFL 64

Query: 492 KMFCRKAATSFFEKYGLISHQINSYNDFVKHGIQQVFDSVGEITVEPSFDPSKKGDGDWR 313
           K FC+KA+T FFEKYGLISHQINSYNDF+ HGIQ++FDSVGEI VEP +DP K+ DGDW+
Sbjct: 65  KNFCKKASTGFFEKYGLISHQINSYNDFINHGIQRLFDSVGEIHVEPGYDPLKRDDGDWK 124

Query: 312 YASLKFGKVTLEHPTFFAGEKFSSVDGFQEHLKLSPRYARLQNMTYSSRIKVETHLQVYT 133
           +AS+KFGKVT+E P F+AGEKF SVD  +E+L L PR+ARLQNMTYS RI VETH+QVYT
Sbjct: 125 HASVKFGKVTVERPKFWAGEKF-SVDSEKEYLDLWPRHARLQNMTYSGRIMVETHVQVYT 183

Query: 132 KGLSRSDKFKTGVENFVDKTVLNDYHSDVIFGRLPVMVKSDLCW 1
           K L  SDKFKTGVE FVDK    +   DV+ GR+PVMV S+LCW
Sbjct: 184 KKLVSSDKFKTGVERFVDKECEKEEKRDVLVGRIPVMVNSELCW 227


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