BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00019725
         (619 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX80752.1| ribonuclease H, partial [Trifolium pratense]           273   1e-84
dbj|GAU41525.1| hypothetical protein TSUD_140560 [Trifolium subt...   271   2e-80
gb|PNX92710.1| ribonuclease H [Trifolium pratense]                    267   5e-80
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...   269   6e-80
ref|XP_023894138.1| uncharacterized protein LOC112006071 [Quercu...   264   2e-79
gb|PNY15111.1| ribonuclease H [Trifolium pratense]                    267   3e-79
ref|XP_010682691.2| PREDICTED: uncharacterized protein LOC104897...   267   3e-79
dbj|GAU35627.1| hypothetical protein TSUD_30450 [Trifolium subte...   266   1e-78
gb|PNX73375.1| ribonuclease H, partial [Trifolium pratense]           261   2e-78
gb|PNX95452.1| ribonuclease H, partial [Trifolium pratense]           254   3e-78
gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]           262   4e-78
gb|PNY15174.1| ribonuclease H, partial [Trifolium pratense]           264   4e-78
gb|PNX95041.1| ribonuclease H, partial [Trifolium pratense]           263   6e-78
dbj|GAU21788.1| hypothetical protein TSUD_329120, partial [Trifo...   261   1e-77
gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]           259   1e-77
gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]           262   2e-77
gb|PNY14301.1| ribonuclease H [Trifolium pratense]                    261   2e-77
gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]           259   4e-77
gb|PNX98065.1| ribonuclease H [Trifolium pratense]                    259   4e-77
gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]           257   6e-77

>gb|PNX80752.1| ribonuclease H, partial [Trifolium pratense]
          Length = 696

 Score =  273 bits (699), Expect = 1e-84
 Identities = 127/205 (61%), Positives = 160/205 (78%)
 Frame = +1

Query: 4   KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
           KAPGPDG+PALF+Q+FW  +  DV +++L ILN+G  P  +NKT I LIPK K P +P D
Sbjct: 5   KAPGPDGLPALFFQKFWHIVGRDVQNLVLEILNNGRSPKDINKTFIALIPKLKNPLAPKD 64

Query: 184 FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
           +RPISLCNV++KI+TKVIANR+K ILP +I   QSAFV GRLITDNAL+A E FH+MK  
Sbjct: 65  YRPISLCNVVMKIVTKVIANRIKPILPDIIDEEQSAFVQGRLITDNALIAMECFHWMKKK 124

Query: 364 NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
              K+GT ALKLDMSKAYDR+EW F++ T+  MG P+++V LI+ C++TVSY ++ NG P
Sbjct: 125 KKGKKGTMALKLDMSKAYDRIEWNFVKATLKSMGFPSNVVDLILNCISTVSYQILINGQP 184

Query: 544 GSPFHPSRGLRQGDPLSPYLFLFCA 618
              F+P RGLRQGDPLSPYLF+ CA
Sbjct: 185 SKSFNPERGLRQGDPLSPYLFILCA 209


>dbj|GAU41525.1| hypothetical protein TSUD_140560 [Trifolium subterraneum]
          Length = 1610

 Score =  271 bits (693), Expect = 2e-80
 Identities = 129/205 (62%), Positives = 157/205 (76%)
 Frame = +1

Query: 4    KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
            KAPGPDG+PALFYQ++W  +  DV  ++L +LND       NKT IVLIPK K P+SP D
Sbjct: 779  KAPGPDGLPALFYQKYWHIVGNDVQQMVLKVLNDNGRVDEFNKTFIVLIPKGKNPKSPKD 838

Query: 184  FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
            +RPISLCNV++KIITKV+ANR+K  LP+VI   QSAF+ GRLITDNAL+A E FH+MK  
Sbjct: 839  YRPISLCNVVMKIITKVVANRIKSTLPNVIDQEQSAFIQGRLITDNALIAMECFHWMKKK 898

Query: 364  NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
               K+G  ALKL+MSKAYDR+EW F+E  +  MG P  +V+LIMRC++TVSY V+ NG P
Sbjct: 899  KKGKKGVMALKLNMSKAYDRIEWKFVENVLSSMGYPPRMVTLIMRCISTVSYQVLINGQP 958

Query: 544  GSPFHPSRGLRQGDPLSPYLFLFCA 618
             SPF P RGLRQGDPLSPYLF+ CA
Sbjct: 959  SSPFIPQRGLRQGDPLSPYLFVLCA 983


>gb|PNX92710.1| ribonuclease H [Trifolium pratense]
          Length = 1052

 Score =  267 bits (683), Expect = 5e-80
 Identities = 127/205 (61%), Positives = 154/205 (75%)
 Frame = +1

Query: 4    KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
            KAPGPDG+PALFYQ++W  +  +V ++ LSILN   DP  +NKT +VLIPK K P SP D
Sbjct: 419  KAPGPDGLPALFYQKYWHIVGVEVQNLALSILNQNGDPRDINKTFLVLIPKGKNPTSPKD 478

Query: 184  FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
            FRPISLCNV++KI+TK IANRLK  LP VI   QSAFV GRLITDNAL+A E FH++K  
Sbjct: 479  FRPISLCNVVMKIVTKTIANRLKLTLPDVIDIEQSAFVQGRLITDNALIAMECFHWLKKK 538

Query: 364  NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
               K+G  ALKLDMSKAYDR+EW F++  +  MG P  +V LIMRC+++VSY ++ NG P
Sbjct: 539  RKGKKGVMALKLDMSKAYDRIEWPFVQHVLASMGYPVRVVELIMRCISSVSYQILINGQP 598

Query: 544  GSPFHPSRGLRQGDPLSPYLFLFCA 618
               F P RGLRQGDPLSPYLF+ CA
Sbjct: 599  SPSFQPERGLRQGDPLSPYLFILCA 623


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score =  269 bits (688), Expect = 6e-80
 Identities = 129/206 (62%), Positives = 155/206 (75%)
 Frame = +1

Query: 1    SKAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPS 180
            +KAPGPDGM ALFYQ FW TI  DV + +L++LN+  +   +N+THIVLIPKKK  ESP 
Sbjct: 452  NKAPGPDGMNALFYQHFWDTIGEDVTTKVLNMLNNVDNIGAVNQTHIVLIPKKKHCESPV 511

Query: 181  DFRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKS 360
            DFRPISLCNV+ KI+ KV+ANR+K +LP VIH  QS FVPGRLITDN L+A+E FHF++ 
Sbjct: 512  DFRPISLCNVLYKIVAKVLANRMKMVLPMVIHESQSGFVPGRLITDNVLVAYECFHFLRK 571

Query: 361  NNAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGL 540
                K+G   LKLDMSKAYDRVEW FLE  MLK+G P     L+M CVT+  +SV+ NG 
Sbjct: 572  KKTGKKGYLGLKLDMSKAYDRVEWCFLENMMLKLGFPTRYTKLVMNCVTSARFSVLVNGQ 631

Query: 541  PGSPFHPSRGLRQGDPLSPYLFLFCA 618
            P   F PSRGLRQGDPLSP+LF+ CA
Sbjct: 632  PSRNFFPSRGLRQGDPLSPFLFVVCA 657


>ref|XP_023894138.1| uncharacterized protein LOC112006071 [Quercus suber]
          Length = 910

 Score =  264 bits (674), Expect = 2e-79
 Identities = 126/205 (61%), Positives = 156/205 (76%)
 Frame = +1

Query: 4   KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
           KAPGPDGMP LFYQ+FW  ++ DVI  +L  LN    P+PLN T I LIPK K PE  S+
Sbjct: 116 KAPGPDGMPPLFYQKFWHLVRGDVIQTVLLYLNSDSLPNPLNHTFITLIPKTKNPERVSE 175

Query: 184 FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
           FRPISLC+V+ KI +KV+ANRLKR+LPH+I   QSAF+ GRLITDN L+A+E  H+MK++
Sbjct: 176 FRPISLCHVLYKIFSKVLANRLKRVLPHIISEHQSAFIKGRLITDNILVAYETLHYMKNH 235

Query: 364 NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
           N+ K G  ALKLDMSKAYDRV+W FL+  ML+MG     V+L+M C+TTV+YS++ NG P
Sbjct: 236 NSGKSGFMALKLDMSKAYDRVKWSFLKNVMLQMGFDVCWVTLVMECITTVTYSILINGEP 295

Query: 544 GSPFHPSRGLRQGDPLSPYLFLFCA 618
                PSRG+RQGDPLSPYLFL C+
Sbjct: 296 MGDIKPSRGIRQGDPLSPYLFLVCS 320


>gb|PNY15111.1| ribonuclease H [Trifolium pratense]
          Length = 1334

 Score =  267 bits (683), Expect = 3e-79
 Identities = 124/205 (60%), Positives = 156/205 (76%)
 Frame = +1

Query: 4    KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
            KAPGPDG+PALF+Q++W  +  DV  ++L ILN+   P  +N+T I LIPK K P++P D
Sbjct: 419  KAPGPDGLPALFFQKYWHIVGRDVQRLVLQILNNDRSPEDINRTFIALIPKVKSPQAPKD 478

Query: 184  FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
            +RPISLCNV++KI+TKVIANR+K ILP ++   QSAFV GRLITDNAL+A E FH+MK  
Sbjct: 479  YRPISLCNVVMKIVTKVIANRIKPILPDIVDEEQSAFVQGRLITDNALIAMECFHWMKKK 538

Query: 364  NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
               K+GT ALKLDMSKAYDR+EW F++ T+  MG P  +V LIM+C+ TVSY ++ NG P
Sbjct: 539  KRGKKGTMALKLDMSKAYDRIEWTFVKATLNSMGFPCKLVDLIMKCICTVSYQILINGQP 598

Query: 544  GSPFHPSRGLRQGDPLSPYLFLFCA 618
               F P RGLRQGDPLSPYLF+ CA
Sbjct: 599  SKLFTPERGLRQGDPLSPYLFILCA 623


>ref|XP_010682691.2| PREDICTED: uncharacterized protein LOC104897505 [Beta vulgaris subsp.
            vulgaris]
          Length = 1284

 Score =  267 bits (682), Expect = 3e-79
 Identities = 125/206 (60%), Positives = 156/206 (75%)
 Frame = +1

Query: 1    SKAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPS 180
            +KAPGPDGM ALFYQ FW+ I  DVI  ++  LN+  D   +N TH+VLIPKK+  ESP 
Sbjct: 634  NKAPGPDGMNALFYQSFWNIIGEDVIDKVMLFLNNIDDIGAVNHTHLVLIPKKQQCESPI 693

Query: 181  DFRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKS 360
            DFRPISLCNV+ K+++KV+ANR+K +LP VIH  Q+ FVPGRLITDN L+ +E FHF++ 
Sbjct: 694  DFRPISLCNVLYKLVSKVLANRMKHVLPDVIHESQNGFVPGRLITDNVLVVYECFHFLRK 753

Query: 361  NNAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGL 540
                K+G   LKLDMSKAYDRVEW FLEK MLK+G P   V L+M+CV++ ++SV+ NG 
Sbjct: 754  KKTGKKGFLGLKLDMSKAYDRVEWGFLEKMMLKLGFPRGYVQLVMKCVSSATFSVLVNGQ 813

Query: 541  PGSPFHPSRGLRQGDPLSPYLFLFCA 618
            P   F PSRGLRQGDPLSP+LF+ CA
Sbjct: 814  PSRSFTPSRGLRQGDPLSPFLFVLCA 839


>dbj|GAU35627.1| hypothetical protein TSUD_30450 [Trifolium subterraneum]
          Length = 1475

 Score =  266 bits (679), Expect = 1e-78
 Identities = 126/205 (61%), Positives = 154/205 (75%)
 Frame = +1

Query: 4    KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
            KAPGPDG+PALF+Q++W  +  +V ++ LSILN   DP  +NKT +VLIPK K P SP D
Sbjct: 552  KAPGPDGLPALFFQKYWHIVGVEVQNLALSILNQNGDPRDINKTFLVLIPKGKNPTSPKD 611

Query: 184  FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
            FRPISLCNV++KI+TK IANRLK  LP VI   QSAFV GRLITDNAL+A E FH++K  
Sbjct: 612  FRPISLCNVVMKIVTKTIANRLKITLPDVIDIEQSAFVQGRLITDNALIAMECFHWLKKK 671

Query: 364  NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
               K+G  ALKLDMSKAYDR+EW F++  +  MG P  +V LIMRC+++VSY ++ NG P
Sbjct: 672  RKGKKGVMALKLDMSKAYDRIEWPFVQHVLTSMGYPVKVVELIMRCISSVSYQILINGQP 731

Query: 544  GSPFHPSRGLRQGDPLSPYLFLFCA 618
               F P RGLRQGDPLSPYLF+ CA
Sbjct: 732  SPSFRPERGLRQGDPLSPYLFILCA 756


>gb|PNX73375.1| ribonuclease H, partial [Trifolium pratense]
          Length = 925

 Score =  261 bits (668), Expect = 2e-78
 Identities = 123/204 (60%), Positives = 155/204 (75%)
 Frame = +1

Query: 7   APGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSDF 186
           APGPDG+PALFY  +W  I  +V +++L +LN+  DPS LN T+I LIPK K P SPS++
Sbjct: 34  APGPDGLPALFYHNYWEIIGEEVTNMVLDVLNNNGDPSHLNSTYICLIPKVKNPSSPSEY 93

Query: 187 RPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSNN 366
           RPISLCNV +KIITK +ANR+K ILP +I P QSAF+ GRLITDN L+A EIFH++ S+ 
Sbjct: 94  RPISLCNVTLKIITKTLANRIKNILPDIISPNQSAFIKGRLITDNTLIASEIFHYL-SHT 152

Query: 367 AQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLPG 546
            +K G   LK DM+KAYDRVEW FLE T+  MG P+++V  IM+CV TV +S++ NG P 
Sbjct: 153 KRKNGFVGLKTDMAKAYDRVEWDFLEATLTSMGFPSTLVHTIMKCVKTVKFSILINGYPS 212

Query: 547 SPFHPSRGLRQGDPLSPYLFLFCA 618
             F+P RGLRQGDPLSPYLF+ CA
Sbjct: 213 KEFYPQRGLRQGDPLSPYLFIICA 236


>gb|PNX95452.1| ribonuclease H, partial [Trifolium pratense]
          Length = 614

 Score =  254 bits (650), Expect = 3e-78
 Identities = 122/204 (59%), Positives = 146/204 (71%)
 Frame = +1

Query: 7   APGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSDF 186
           APGPDG+PALFY  +W  +  DV    L +LN      P N T+I LIPKKK P  PSDF
Sbjct: 132 APGPDGLPALFYHTYWDIVGSDVTDAALHVLNHKGSSKPYNHTYICLIPKKKNPTHPSDF 191

Query: 187 RPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSNN 366
           RPISLCNV +KIITK IANRLK ILP VI   QSAFVPGRLITDN L+A+E+FH    +N
Sbjct: 192 RPISLCNVTLKIITKTIANRLKSILPDVISLNQSAFVPGRLITDNTLVAYEVFHHFNQSN 251

Query: 367 AQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLPG 546
           ++K G   +K DM+KAYDR+EW FL+ T+  MG P+ +   IM CVT V++S++ NG P 
Sbjct: 252 SRK-GFMGIKTDMAKAYDRMEWNFLKTTLESMGFPHQLTDTIMECVTNVTFSILINGTPS 310

Query: 547 SPFHPSRGLRQGDPLSPYLFLFCA 618
            PF P RGLRQGDPLSPYLF+ CA
Sbjct: 311 QPFSPQRGLRQGDPLSPYLFIICA 334


>gb|PNY01158.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1068

 Score =  262 bits (670), Expect = 4e-78
 Identities = 122/205 (59%), Positives = 152/205 (74%)
 Frame = +1

Query: 4    KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
            KAPGPDG+PALF+Q++W  +  D+I + L ILN+G  P  +NKT I LIPK K P +P  
Sbjct: 411  KAPGPDGLPALFFQEYWHIVGNDIIDLSLGILNEGKSPEVINKTFIALIPKCKNPSAPKQ 470

Query: 184  FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
            FRPISLCNV +KI+TK IANR+K ILP V+   QSAFV GRLITDNAL+A E FH++K  
Sbjct: 471  FRPISLCNVTMKIVTKTIANRIKSILPDVVDEEQSAFVKGRLITDNALIAMECFHWLKKK 530

Query: 364  NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
               KRGT ALKLDM+KAYDR+EW F+   +  MG P   + LIM C++TVSY ++ NG P
Sbjct: 531  VKGKRGTMALKLDMAKAYDRMEWAFIRGVLHNMGFPERFLQLIMSCISTVSYQILINGQP 590

Query: 544  GSPFHPSRGLRQGDPLSPYLFLFCA 618
             S F P+RG+RQGDPLSPY+F+ CA
Sbjct: 591  SSSFSPNRGIRQGDPLSPYIFILCA 615


>gb|PNY15174.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1289

 Score =  264 bits (674), Expect = 4e-78
 Identities = 123/205 (60%), Positives = 156/205 (76%)
 Frame = +1

Query: 4    KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
            KAPGPDG+PA F+Q++WS I  DV S+IL+ILN+   P  +NKT + LIPK K P +P D
Sbjct: 916  KAPGPDGLPAFFFQKYWSIIGEDVQSLILNILNNNRPPGDINKTFLTLIPKNKNPTTPKD 975

Query: 184  FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
            +RPISLCNV++KI+TK IANR+K ILP +I   QSAFV GRLITDNAL+A E FH++K  
Sbjct: 976  YRPISLCNVLMKIVTKCIANRIKPILPEIIDEEQSAFVQGRLITDNALIAMECFHWLKKK 1035

Query: 364  NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
               ++G  ALKLDM+KAYDR+EW F++ T++ MG P  +V LIMRC++TVSY ++ NG P
Sbjct: 1036 KKGRKGMMALKLDMAKAYDRIEWPFVKATLISMGFPTKMVDLIMRCISTVSYQILINGQP 1095

Query: 544  GSPFHPSRGLRQGDPLSPYLFLFCA 618
               F   RGLRQGDPLSPYLF+ CA
Sbjct: 1096 SKRFTAERGLRQGDPLSPYLFILCA 1120


>gb|PNX95041.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1348

 Score =  263 bits (673), Expect = 6e-78
 Identities = 121/205 (59%), Positives = 158/205 (77%)
 Frame = +1

Query: 4    KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
            +APGPDG+PALFYQ++W  +  DV S++L ILN+   P  +N T IVLIPK K P++P D
Sbjct: 533  RAPGPDGLPALFYQKYWHFVGKDVKSLVLDILNNHSSPEAINGTFIVLIPKGKNPKTPKD 592

Query: 184  FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
            +RPISLCNV++KI+TK +ANRLK I+P VI   QS FV GRLITDN L+A E FH++K  
Sbjct: 593  YRPISLCNVVMKIVTKTLANRLKVIMPDVIDVEQSGFVQGRLITDNGLIAMECFHWLKKK 652

Query: 364  NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
               K+G  A+KLDMSKAYDR+EW F++  ++KMG P++IVS+IM+C++TVSY ++ NG P
Sbjct: 653  RKGKKGMMAVKLDMSKAYDRIEWAFVQTVLVKMGFPDNIVSVIMKCISTVSYQILINGQP 712

Query: 544  GSPFHPSRGLRQGDPLSPYLFLFCA 618
               F P RGLRQGDP+SPYLF+ CA
Sbjct: 713  SISFTPDRGLRQGDPISPYLFILCA 737


>dbj|GAU21788.1| hypothetical protein TSUD_329120, partial [Trifolium subterraneum]
          Length = 1086

 Score =  261 bits (667), Expect = 1e-77
 Identities = 123/205 (60%), Positives = 154/205 (75%)
 Frame = +1

Query: 4    KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
            KAPGPDG+PALF+Q++W  +  +V  ++L+ILN    P  +NKT +VLIPK K P SP D
Sbjct: 822  KAPGPDGLPALFFQKYWHIVGDEVQLLVLNILNHNGQPHDINKTFLVLIPKCKNPSSPKD 881

Query: 184  FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
            FRPISLCNV++KI+TKVIANRLK  L  V+   QSAFV GRLITDNAL+A E FH++K  
Sbjct: 882  FRPISLCNVVMKIVTKVIANRLKETLSDVVDLEQSAFVQGRLITDNALIAMECFHWLKKK 941

Query: 364  NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
               K+G  ALKLDMSKAYDRVEW F+ +T++ MG P  +  LI+RC+++VSY ++ NG P
Sbjct: 942  RKGKKGVMALKLDMSKAYDRVEWSFVHRTLISMGYPIKMADLILRCISSVSYQILINGQP 1001

Query: 544  GSPFHPSRGLRQGDPLSPYLFLFCA 618
               F P RGLRQGDPLSPYLF+ CA
Sbjct: 1002 SKSFSPERGLRQGDPLSPYLFILCA 1026


>gb|PNY02790.1| ribonuclease H, partial [Trifolium pratense]
          Length = 916

 Score =  259 bits (661), Expect = 1e-77
 Identities = 123/204 (60%), Positives = 153/204 (75%)
 Frame = +1

Query: 7   APGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSDF 186
           APGPDG+PALFY  +W  I  DV ++ L ILN+  DPS LN T+I LIPK   P +PSDF
Sbjct: 89  APGPDGLPALFYHNYWEIIGEDVTNMALDILNNNSDPSHLNSTYICLIPKTNNPSTPSDF 148

Query: 187 RPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSNN 366
           RPISLCNV +KI+TK +ANR+K +LP VI P QSAF+ GRLITDN ++A EIFH++ +++
Sbjct: 149 RPISLCNVSLKIVTKTLANRIKDMLPEVISPNQSAFIKGRLITDNTIIASEIFHYL-AHS 207

Query: 367 AQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLPG 546
            +K G   +K DM+KAYDRVEW FLE T+  MG P S+VS IM CV TV +S++ NG P 
Sbjct: 208 KRKNGYVGIKTDMAKAYDRVEWDFLEATLTSMGFPKSMVSTIMNCVRTVKFSILINGHPS 267

Query: 547 SPFHPSRGLRQGDPLSPYLFLFCA 618
             F+P RGLRQGDPLSPYLF+ CA
Sbjct: 268 QEFYPQRGLRQGDPLSPYLFIICA 291


>gb|PNX96384.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1376

 Score =  262 bits (669), Expect = 2e-77
 Identities = 125/204 (61%), Positives = 150/204 (73%)
 Frame = +1

Query: 7    APGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSDF 186
            APGPDG+PA+FY   W  I  +V  + L++LND  DP+ LN THI LIPK   P SPSD+
Sbjct: 453  APGPDGLPAIFYHTHWEVIGREVTDMALNVLNDNGDPNHLNTTHICLIPKTNNPNSPSDY 512

Query: 187  RPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSNN 366
            RPISLCNV +KIITK IANRLK ILP +I P QSAF+ GRLITDN L+A E+FH++   N
Sbjct: 513  RPISLCNVTLKIITKTIANRLKSILPDIISPNQSAFIKGRLITDNTLIASEVFHYLAQTN 572

Query: 367  AQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLPG 546
             +K G   +K DM+KAYDRVEW FL  T+  MG P S+V  IM+CVTTV +S+I NG P 
Sbjct: 573  -RKSGYVGIKTDMAKAYDRVEWDFLRTTLTTMGFPTSLVHTIMKCVTTVKFSIIINGYPS 631

Query: 547  SPFHPSRGLRQGDPLSPYLFLFCA 618
              F+P RGLRQGDPLSPYLF+ CA
Sbjct: 632  RQFYPQRGLRQGDPLSPYLFIICA 655


>gb|PNY14301.1| ribonuclease H [Trifolium pratense]
          Length = 1196

 Score =  261 bits (667), Expect = 2e-77
 Identities = 124/205 (60%), Positives = 152/205 (74%)
 Frame = +1

Query: 4   KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
           KAPGPDG+PALFYQ++W  +  D+  ++L+ILN    P  +NKT +VLIPK K P SP D
Sbjct: 278 KAPGPDGIPALFYQKYWHIVGGDIQQMVLNILNHNGQPHEINKTFLVLIPKGKNPCSPKD 337

Query: 184 FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
           FRPISLCNV++KI+TKVIANRLK  LP V+   QSAFV GRLI+DNAL+A E FH++K  
Sbjct: 338 FRPISLCNVVMKIVTKVIANRLKYTLPDVVDIEQSAFVQGRLISDNALIAMECFHWLKKK 397

Query: 364 NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
              K+G  ALKLDMSKAYDR+EW F+   +  MG     V LIMRC+T+VSY ++ NG P
Sbjct: 398 KQGKKGMMALKLDMSKAYDRIEWSFVNHVLTSMGYSQKFVELIMRCITSVSYQILINGQP 457

Query: 544 GSPFHPSRGLRQGDPLSPYLFLFCA 618
            + F P RGLRQGDPLSPYLF+ CA
Sbjct: 458 STTFFPERGLRQGDPLSPYLFILCA 482


>gb|PNY16050.1| ribonuclease H, partial [Trifolium pratense]
          Length = 1066

 Score =  259 bits (663), Expect = 4e-77
 Identities = 123/204 (60%), Positives = 155/204 (75%)
 Frame = +1

Query: 7   APGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSDF 186
           APGPDG+PALFY  +W  I  +V +++L +LN+  DPS LN T+I LIPK   P SPSDF
Sbjct: 354 APGPDGLPALFYHNYWEIIGEEVTNMVLDVLNNNEDPSHLNSTYICLIPKINHPSSPSDF 413

Query: 187 RPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSNN 366
           RPISLCNV +KIITK +ANR+K ILP VI P QSAF+ GRLITDN L+A EIFH++ ++ 
Sbjct: 414 RPISLCNVTLKIITKTLANRIKNILPDVISPNQSAFIKGRLITDNTLIASEIFHYL-AHT 472

Query: 367 AQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLPG 546
            +K G   +K DM+KAYDRVEW FLE T+  MG P+++V+ IM+CV TV +S++ NG P 
Sbjct: 473 KRKNGFVGIKTDMAKAYDRVEWDFLEATLSTMGFPSTMVATIMKCVKTVKFSILINGHPS 532

Query: 547 SPFHPSRGLRQGDPLSPYLFLFCA 618
             F+P RGLRQGDPLSPYLF+ CA
Sbjct: 533 QEFYPQRGLRQGDPLSPYLFIICA 556


>gb|PNX98065.1| ribonuclease H [Trifolium pratense]
          Length = 1011

 Score =  259 bits (661), Expect = 4e-77
 Identities = 123/204 (60%), Positives = 153/204 (75%)
 Frame = +1

Query: 7   APGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSDF 186
           APGPDG+PALFY  +W  I  DV ++ L ILN+  DPS LN T+I LIPK   P +PSDF
Sbjct: 89  APGPDGLPALFYHNYWEIIGEDVTNMALDILNNNSDPSHLNSTYICLIPKTNNPSTPSDF 148

Query: 187 RPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSNN 366
           RPISLCNV +KI+TK +ANR+K +LP VI P QSAF+ GRLITDN ++A EIFH++ +++
Sbjct: 149 RPISLCNVSLKIVTKTLANRIKDMLPEVISPNQSAFIKGRLITDNTIIASEIFHYL-AHS 207

Query: 367 AQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLPG 546
            +K G   +K DM+KAYDRVEW FLE T+  MG P S+VS IM CV TV +S++ NG P 
Sbjct: 208 KRKNGYVGIKTDMAKAYDRVEWDFLEATLTSMGFPKSMVSTIMNCVRTVKFSILINGHPS 267

Query: 547 SPFHPSRGLRQGDPLSPYLFLFCA 618
             F+P RGLRQGDPLSPYLF+ CA
Sbjct: 268 QEFYPQRGLRQGDPLSPYLFIICA 291


>gb|PNY16580.1| ribonuclease H, partial [Trifolium pratense]
          Length = 894

 Score =  257 bits (656), Expect = 6e-77
 Identities = 121/205 (59%), Positives = 152/205 (74%)
 Frame = +1

Query: 4   KAPGPDGMPALFYQQFWSTIKCDVISVILSILNDGVDPSPLNKTHIVLIPKKKMPESPSD 183
           KAPGPDG+PALF+Q++W  +  D    +LSILND   P  LN+T + LIPK K P SP+ 
Sbjct: 40  KAPGPDGIPALFFQKYWHIVGKDTCLKVLSILNDNGTPESLNRTFVALIPKCKNPGSPNH 99

Query: 184 FRPISLCNVIIKIITKVIANRLKRILPHVIHPCQSAFVPGRLITDNALLAFEIFHFMKSN 363
           FRPISLCNVI+KI+TK IANR+K ILP V+   QSAFV GRLITDNAL+A E FH+MK  
Sbjct: 100 FRPISLCNVIMKIVTKCIANRMKCILPEVVDEEQSAFVKGRLITDNALIAMECFHWMKKK 159

Query: 364 NAQKRGTFALKLDMSKAYDRVEWVFLEKTMLKMGIPNSIVSLIMRCVTTVSYSVITNGLP 543
              K+G  ALKLDM+KAYDR+EW F+  T+   G P ++++LIM C++TVSY ++ NG P
Sbjct: 160 TKGKKGMMALKLDMAKAYDRMEWPFIRSTLQATGFPPTMINLIMNCISTVSYQLLVNGQP 219

Query: 544 GSPFHPSRGLRQGDPLSPYLFLFCA 618
              F P RG+RQGDPLSPY+F+ CA
Sbjct: 220 SRSFKPERGIRQGDPLSPYVFILCA 244