BLASTX nr result

ID: Rehmannia32_contig00019588 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00019588
         (562 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN24143.1| hypothetical protein CDL12_03136 [Handroanthus im...    72   3e-12
ref|XP_012834085.1| PREDICTED: uncharacterized protein LOC105954...    60   5e-08
ref|XP_020554220.1| uncharacterized protein LOC105176117 [Sesamu...    55   6e-06
gb|EFH43259.1| At4g36660 [Arabidopsis lyrata subsp. lyrata]            55   6e-06

>gb|PIN24143.1| hypothetical protein CDL12_03136 [Handroanthus impetiginosus]
          Length = 176

 Score = 71.6 bits (174), Expect = 3e-12
 Identities = 40/63 (63%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
 Frame = -1

Query: 562 GLGGFWQEAFVAAYEDLTSEVPXXXXXXXXXXXRMSVRYVPPQQS-SSSSMLDLNLKRVV 386
           GL GFWQEAFVAAYEDLTS+VP           RMSVRYVP Q S SS S+ DLNLK+ +
Sbjct: 114 GLAGFWQEAFVAAYEDLTSDVPEVRDAAISEIARMSVRYVPSQPSLSSVSLPDLNLKQAI 173

Query: 385 TGQ 377
           T Q
Sbjct: 174 TKQ 176


>ref|XP_012834085.1| PREDICTED: uncharacterized protein LOC105954948 [Erythranthe
           guttata]
 gb|EYU40147.1| hypothetical protein MIMGU_mgv1a015364mg [Erythranthe guttata]
          Length = 160

 Score = 60.1 bits (144), Expect = 5e-08
 Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
 Frame = -1

Query: 562 GLGGFWQEAFVAAYEDLTSEVPXXXXXXXXXXXRMSVRYVPPQQSS-SSSMLDLNLKRVV 386
           GL GFWQ+AFVAAYEDL+S+ P            MSVRY+P   S  S  M DLNL++VV
Sbjct: 98  GLVGFWQDAFVAAYEDLSSDAPLVRDIAISEIAMMSVRYLPSLNSPFSLEMQDLNLQQVV 157

Query: 385 T 383
           T
Sbjct: 158 T 158


>ref|XP_020554220.1| uncharacterized protein LOC105176117 [Sesamum indicum]
          Length = 169

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 31/52 (59%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
 Frame = -1

Query: 556 GGFWQEAFVAAYEDLTSEVPXXXXXXXXXXXRMSVRYV---PPQQSSSSSML 410
           GGFWQEAFVAAYEDLTSEVP           RMS RY+   PP   SS S+L
Sbjct: 118 GGFWQEAFVAAYEDLTSEVPEVREAAISEIARMSARYLKLDPPPVHSSLSLL 169


>gb|EFH43259.1| At4g36660 [Arabidopsis lyrata subsp. lyrata]
          Length = 178

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 4/59 (6%)
 Frame = -1

Query: 550 FWQEAFVAAYEDLTSEVPXXXXXXXXXXXRMSVRYV----PPQQSSSSSMLDLNLKRVV 386
           FWQEAFVAAYE+LTS+VP           +MSVR +    PP +S S+S L  NLKR++
Sbjct: 113 FWQEAFVAAYEELTSDVPGVREAAIGEIAKMSVRSITLDPPPSRSMSASDLGRNLKRIL 171


Top