BLASTX nr result

ID: Rehmannia32_contig00019546 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00019546
         (488 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN13533.1| hypothetical protein CDL12_13845 [Handroanthus im...    63   1e-08

>gb|PIN13533.1| hypothetical protein CDL12_13845 [Handroanthus impetiginosus]
          Length = 446

 Score = 63.2 bits (152), Expect = 1e-08
 Identities = 40/84 (47%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
 Frame = -2

Query: 244 KKCPFEAIQIINLPKDFEPISIKLPTESRISDVVVKCTSLVKDTKLDYQPVGKDVHNVDL 65
           K CP +   +I+   D E    +LP  SRIS+ VVK  ++VKD KLD Q V KD HN DL
Sbjct: 178 KSCPQDNKDVIDF-MDIED-GAELPNRSRISNAVVKSINMVKDVKLDCQSVCKDGHNDDL 235

Query: 64  TP---MSSQLTSEKVPKQMLSGQR 2
            P   +S Q TS+KV +++L GQR
Sbjct: 236 KPIPAISRQSTSKKVSEKILPGQR 259


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