BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00018327
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus] >...   115   3e-27
dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]   115   4e-27
gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]    115   4e-27
gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]    115   4e-27
gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]            114   8e-27
gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]                  113   3e-26
gb|ABW80581.1| polyprotein [Dahlia mosaic virus]                      113   3e-26
gb|AEA39176.1| polyprotein [Dahlia mosaic virus]                      112   5e-26
ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic prote...   110   3e-25
gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]                      108   1e-24
gb|AMN10080.1| reverse transcriptase [Angelica bushy stunt virus]     107   2e-24
ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia fl...   107   3e-24
gb|AQS27979.1| putative reverse transcriptase [Strawberry vein b...   107   3e-24
ref|NP_619548.1| unnamed protein product [Figwort mosaic virus] ...   106   5e-24
ref|YP_009165750.1| ORF5 [Atractylodes mild mottle virus] >gi|92...   106   7e-24
emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]         106   7e-24
gb|ALF37644.1| putative reverse transcriptase [Strawberry vein b...   106   7e-24
gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]          105   9e-24
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]            105   1e-23
emb|CAH68829.1| polyprotein [Carnation etched ring virus]             105   1e-23

>ref|NP_659397.1| hypothetical protein [Mirabilis mosaic virus]
 gb|AAM53128.1| ORFV [Mirabilis mosaic virus]
          Length = 674

 Score =  115 bits (289), Expect = 3e-27
 Identities = 61/134 (45%), Positives = 83/134 (61%), Gaps = 1/134 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           I  FPD ++DKKQLQ FLGV+ +A  +I  LA  RK     LKKD V+ W     + +K+
Sbjct: 460 IHTFPDRIEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWIWTQSDTDYVKK 519

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K+     PKL +P+ ED L++ TDASD +W  VL  + T  EE+ CRY SG F P+E  
Sbjct: 520 IKKGLINFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGEELICRYSSGTFKPAE-L 578

Query: 57  RWHINEKEFFAVRK 16
            +H NEKE  AV++
Sbjct: 579 NYHSNEKELLAVKQ 592


>dbj|BAS06276.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 672

 Score =  115 bits (288), Expect = 4e-27
 Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           +  FPD L+DKKQLQ FLGV+ +A  +I  LA  RK     LKKD V+ W     + +K+
Sbjct: 461 LHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWIWNQSDTDYVKK 520

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K+     PKL +P+ ED L++ TDASD +W  VL  + T   E+ CRY SG F P+E  
Sbjct: 521 IKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAE-L 579

Query: 57  RWHINEKEFFAVRK 16
            +H NEKE  AV++
Sbjct: 580 NYHSNEKELLAVKQ 593


>gb|AEL30041.1| polymerase polyprotein [Dahlia common mosaic virus]
          Length = 673

 Score =  115 bits (288), Expect = 4e-27
 Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           +  FPD L+DKKQLQ FLGV+ +A  +I  LA  RK     LKKD V+ W     + +K+
Sbjct: 462 LHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWIWNQSDTDYVKK 521

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K+     PKL +P+ ED L++ TDASD +W  VL  + T   E+ CRY SG F P+E  
Sbjct: 522 IKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAE-L 580

Query: 57  RWHINEKEFFAVRK 16
            +H NEKE  AV++
Sbjct: 581 NYHSNEKELLAVKQ 594


>gb|ABW81763.1| reverse transcriptase [Dahlia mosaic virus-Holland]
          Length = 673

 Score =  115 bits (288), Expect = 4e-27
 Identities = 60/134 (44%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           +  FPD L+DKKQLQ FLGV+ +A  +I  LA  RK     LKKD V+ W     + +K+
Sbjct: 462 LHNFPDRLEDKKQLQRFLGVLTYADSYIPKLAEKRKPLQVKLKKDQVWIWNQSDTDYVKK 521

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K+     PKL +P+ ED L++ TDASD +W  VL  + T   E+ CRY SG F P+E  
Sbjct: 522 IKKGLVNFPKLYLPKKEDSLIIETDASDHFWGGVLKAQTTEGNELICRYSSGTFKPAE-L 580

Query: 57  RWHINEKEFFAVRK 16
            +H NEKE  AV++
Sbjct: 581 NYHSNEKELLAVKQ 594


>gb|AGQ49469.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 814

 Score =  114 bits (286), Expect = 8e-27
 Identities = 59/129 (45%), Positives = 82/129 (63%)
 Frame = -2

Query: 405 FPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQLKE 226
           FPDTL+DKK LQ FLGV+ +A  +I  LA  RK     LKKD V++W+      IK++K+
Sbjct: 612 FPDTLEDKKHLQRFLGVLTYAESYIPKLAELRKPLQVKLKKDYVWEWKQSDTNYIKKIKK 671

Query: 225 VCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEATRWHI 46
                PKL +P++E+ L++ TDAS+D+W  VL   T ++E  CRY SG F  +E   +H 
Sbjct: 672 NLTSFPKLYLPKEEEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAE-KNYHS 730

Query: 45  NEKEFFAVR 19
           NEKE  AV+
Sbjct: 731 NEKELLAVK 739


>gb|AEB54984.1| polyprotein [Dahlia mosaic virus D10]
          Length = 810

 Score =  113 bits (282), Expect = 3e-26
 Identities = 57/131 (43%), Positives = 82/131 (62%)
 Frame = -2

Query: 405 FPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQLKE 226
           FPDTL+DKK LQ FLG++ +A  +I  LA  R+     LKKD V++W+      IK++K+
Sbjct: 608 FPDTLEDKKHLQRFLGILTYAESYIPKLAELRRPLQVKLKKDYVWEWKQSDTSYIKKIKK 667

Query: 225 VCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEATRWHI 46
                PKL +P++++ L++ TDAS+D+W  VL   T  +E  CRY SG F  +E   +H 
Sbjct: 668 NLTSFPKLYLPKEKEFLIIETDASNDYWGGVLKAKTAEKEEVCRYTSGSFKTAE-KNYHS 726

Query: 45  NEKEFFAVRKA 13
           NEKE  AV+ A
Sbjct: 727 NEKELLAVKNA 737


>gb|ABW80581.1| polyprotein [Dahlia mosaic virus]
          Length = 812

 Score =  113 bits (282), Expect = 3e-26
 Identities = 58/129 (44%), Positives = 82/129 (63%)
 Frame = -2

Query: 405 FPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQLKE 226
           FPDTL+DKK LQ FLGV+ +A  +I  LA  RK     LKKD V++W+      IK++K+
Sbjct: 610 FPDTLEDKKHLQRFLGVLTYAESYIPKLAELRKPLQVKLKKDYVWEWKQSDTNYIKKIKK 669

Query: 225 VCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEATRWHI 46
                PKL +P++++ L++ TDAS+D+W  VL   T ++E  CRY SG F  +E   +H 
Sbjct: 670 NLTSFPKLYLPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAE-RNYHS 728

Query: 45  NEKEFFAVR 19
           NEKE  AV+
Sbjct: 729 NEKELLAVK 737


>gb|AEA39176.1| polyprotein [Dahlia mosaic virus]
          Length = 808

 Score =  112 bits (280), Expect = 5e-26
 Identities = 58/129 (44%), Positives = 82/129 (63%)
 Frame = -2

Query: 405 FPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQLKE 226
           FPDTL+DKK LQ FLGV+ +A  +I  LA  RK     LKKD V++W+      IK++K+
Sbjct: 606 FPDTLEDKKHLQRFLGVLTYAESYIPKLAELRKPLQVKLKKDYVWEWKQSDTNYIKKIKK 665

Query: 225 VCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEATRWHI 46
                PKL +P++++ L++ TDAS+D+W  VL   T ++E  CRY SG F  +E   +H 
Sbjct: 666 NLISFPKLYLPKEKEFLIIETDASNDFWGGVLKAKTADKEEVCRYTSGSFKTAE-KNYHS 724

Query: 45  NEKEFFAVR 19
           NEKE  AV+
Sbjct: 725 NEKELLAVK 733


>ref|NP_612577.1| Enzymatic polyprotein [Contains: Aspartic protease; Endonuclease;
           Reverse transcriptase] [Carnation etched ring virus]
 sp|P05400.1|POL_CERV RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
 emb|CAA28360.1| unnamed protein product [Carnation etched ring virus]
 prf||1301227E ORF 5
          Length = 659

 Score =  110 bits (274), Expect = 3e-25
 Identities = 55/136 (40%), Positives = 81/136 (59%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           I  FPD ++DKKQLQ FLG++ +A  +I  LA  RK     LK+D+ + W D   + + +
Sbjct: 451 IHKFPDRIEDKKQLQRFLGILTYASDYIPKLASIRKPLQSKLKEDSTWTWNDTDSQYMAK 510

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEATR 55
           +K+  K  PKL  P+  D+LV+ TDAS+++W  +L  +  + E  CRY SG F  +E   
Sbjct: 511 IKKNLKSFPKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAE-RN 569

Query: 54  WHINEKEFFAVRKAFK 7
           +H NEKE  AV +  K
Sbjct: 570 YHSNEKELLAVIRVIK 585


>gb|ADZ44590.1| polyprotein [Dahlia mosaic virus]
          Length = 806

 Score =  108 bits (270), Expect = 1e-24
 Identities = 55/129 (42%), Positives = 81/129 (62%)
 Frame = -2

Query: 405 FPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQLKE 226
           FPDTL+DKK LQ FLGV+ +A  +I  LA  R+     LKKD V++W+      IK++K+
Sbjct: 604 FPDTLEDKKHLQRFLGVLTYAESYIPKLAELRRPLQVKLKKDYVWEWKQSDTNYIKKIKK 663

Query: 225 VCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEATRWHI 46
                PKL +P++++  ++ TDAS+D+W  VL   T ++E  CRY SG F  +E   +H 
Sbjct: 664 NLTSFPKLYLPKEKEFPIIETDASNDFWGGVLKAKTADKEAVCRYTSGSFKTAE-KNYHS 722

Query: 45  NEKEFFAVR 19
           NEK+  AV+
Sbjct: 723 NEKKLLAVK 731


>gb|AMN10080.1| reverse transcriptase [Angelica bushy stunt virus]
          Length = 703

 Score =  107 bits (268), Expect = 2e-24
 Identities = 58/137 (42%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           I  FPD ++DKKQLQ FLG++ +A  +I  LA  R      LKKD  + W       + +
Sbjct: 495 IAKFPDKIEDKKQLQRFLGILTYASDYIPGLASKRAPLQVKLKKDISWNWTASDTSYVAK 554

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPN-EEVPCRYCSGLFTPSEAT 58
           LK+     PKL  P  +D+L++ TDAS D+W  +L     N EE+ CRY SG F  +E T
Sbjct: 555 LKKGLNNFPKLYHPLPDDKLIIETDASQDYWGGILKAANTNGEELICRYASGSFKSAE-T 613

Query: 57  RWHINEKEFFAVRKAFK 7
           R+H NEKE+ AV +  K
Sbjct: 614 RYHSNEKEYLAVIRVIK 630


>ref|YP_002519387.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
 gb|ACL36982.1| putative enzymatic polyprotein [Rudbeckia flower distortion virus]
          Length = 701

 Score =  107 bits (267), Expect = 3e-24
 Identities = 57/134 (42%), Positives = 82/134 (61%), Gaps = 1/134 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           I+ FP  + DKK LQ FLG++ +A  +I  LA +RK     LKKD V++W D   + +++
Sbjct: 492 IKLFPSRIPDKKSLQRFLGILTYADQYIRKLAEWRKPLQRKLKKDTVWEWNDSDTQYVEK 551

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
            K   K+ PKL  P  ++ L++ TDAS + WA VL ++ T N E  CRY SG F P+E  
Sbjct: 552 FKRNLKEFPKLHHPLPDEYLIIETDASHEHWAGVLKSRGTDNLERLCRYTSGSFKPAE-I 610

Query: 57  RWHINEKEFFAVRK 16
            +H NEKE  AV++
Sbjct: 611 NYHSNEKEVLAVKR 624


>gb|AQS27979.1| putative reverse transcriptase [Strawberry vein banding virus]
          Length = 745

 Score =  107 bits (267), Expect = 3e-24
 Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 1/137 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           +  FPD L D+  LQ FLG++N+   +   +A  R      LKK+ ++ W ++  E +++
Sbjct: 537 LTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKEIIWSWTEKDTETVRK 596

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K + K LP L  P  ED+ ++  DASDD W AVL  K+   +EV CRY SG F P+E  
Sbjct: 597 IKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLKVKLPEGKEVICRYASGTFKPAE-K 655

Query: 57  RWHINEKEFFAVRKAFK 7
            +H NEKE  ++ KA K
Sbjct: 656 NYHSNEKEILSIIKAIK 672


>ref|NP_619548.1| unnamed protein product [Figwort mosaic virus]
 sp|P09523.1|POL_FMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
 emb|CAA29527.1| unnamed protein product [Figwort mosaic virus]
          Length = 666

 Score =  106 bits (265), Expect = 5e-24
 Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 1/134 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           I  FPD L+DKK LQ FLGV+ +A  +I  LA  RK     LKKD  + W     + +K+
Sbjct: 460 IHKFPDRLEDKKHLQRFLGVLTYAETYIPKLAEIRKPLQVKLKKDVTWNWTQSDSDYVKK 519

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K+     PKL +P+ ED L++ TDASD +W  VL  +     E+ CRY SG F  +E  
Sbjct: 520 IKKNLGSFPKLYLPKPEDHLIIETDASDSFWGGVLKARALDGVELICRYSSGSFKQAE-K 578

Query: 57  RWHINEKEFFAVRK 16
            +H N+KE  AV++
Sbjct: 579 NYHSNDKELLAVKQ 592


>ref|YP_009165750.1| ORF5 [Atractylodes mild mottle virus]
 gb|ALD49090.1| ORF5 [Atractylodes mild mottle virus]
          Length = 679

 Score =  106 bits (264), Expect = 7e-24
 Identities = 58/138 (42%), Positives = 77/138 (55%), Gaps = 2/138 (1%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           I  FPD L+DKKQLQ FLG++ +A  +I  LA  RK F   LKKD  + W D     + +
Sbjct: 472 IHKFPDRLEDKKQLQRFLGILTYASDYIPKLAQIRKPFQAKLKKDVTWSWTDSDTSLMIK 531

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNE--EVPCRYCSGLFTPSEA 61
           +K+  K  P L  P++ED L++  DASD +W  +L   T +E  E  CRY SG F  +E 
Sbjct: 532 IKKGLKSFPTLYHPKEEDNLIIECDASDSFWGGILKAKTIDEDKEYICRYTSGSFKQAE- 590

Query: 60  TRWHINEKEFFAVRKAFK 7
             +H NEKE  A     K
Sbjct: 591 LNYHSNEKEILAAMNTIK 608


>emb|CCG14716.1| ORF V protein [Strawberry vein banding virus]
          Length = 699

 Score =  106 bits (264), Expect = 7e-24
 Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           +  FPD L D+  LQ FLG++N+   +   +A  R      LKK+  + W ++  E +++
Sbjct: 491 LTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKEITWSWTEKDTETVRK 550

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K + K LP L  P  ED+ ++  DASDD W AVL  K+   +EV CRY SG F P+E  
Sbjct: 551 IKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAE-K 609

Query: 57  RWHINEKEFFAVRKAFK 7
            +H NEKE  ++ KA K
Sbjct: 610 NYHSNEKEILSIIKAIK 626


>gb|ALF37644.1| putative reverse transcriptase [Strawberry vein banding virus]
          Length = 704

 Score =  106 bits (264), Expect = 7e-24
 Identities = 54/137 (39%), Positives = 79/137 (57%), Gaps = 1/137 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           +  FPD L D+  LQ FLG++N+   +   +A  R      LKK+  + W ++  E +++
Sbjct: 496 LTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKEITWSWTEKDTETVRK 555

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K + K LP L  P  ED+ ++  DASDD W AVL  K+   +EV CRY SG F P+E  
Sbjct: 556 IKSLVKSLPDLYNPSPEDKPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAE-K 614

Query: 57  RWHINEKEFFAVRKAFK 7
            +H NEKE  ++ KA K
Sbjct: 615 NYHSNEKEILSIIKAIK 631


>gb|AKB94071.1| ORF V protein [Strawberry vein banding virus]
          Length = 704

 Score =  105 bits (263), Expect = 9e-24
 Identities = 54/137 (39%), Positives = 78/137 (56%), Gaps = 1/137 (0%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           +  FPD L D+  LQ FLG++N+   +   +A  R      LKK+  + W ++  E +++
Sbjct: 496 LTAFPDQLADRNALQRFLGLLNYISAYFPKIANLRSPLQVKLKKEITWSWTEKDTETVRK 555

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVL-TKVTPNEEVPCRYCSGLFTPSEAT 58
           +K + K LP L  P  ED  ++  DASDD W AVL  K+   +EV CRY SG F P+E  
Sbjct: 556 IKSLVKSLPDLYNPSPEDRPIIECDASDDHWGAVLKAKLPEGKEVICRYASGTFKPAE-K 614

Query: 57  RWHINEKEFFAVRKAFK 7
            +H NEKE  ++ KA K
Sbjct: 615 NYHSNEKEILSIIKAIK 631


>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 825

 Score =  105 bits (263), Expect = 1e-23
 Identities = 55/129 (42%), Positives = 77/129 (59%)
 Frame = -2

Query: 405  FPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQLKE 226
            FPDTL+DKK LQ FLGV+ +A  +I  LA  R+     LKKD V++W+      +K++K+
Sbjct: 619  FPDTLEDKKHLQRFLGVLTYAESYIPKLAELRRPLQVKLKKDFVWEWKQSDTNYVKKIKK 678

Query: 225  VCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEATRWHI 46
                 PKL +P  ED L++ T AS+++W  VL   T   E  C+Y SG F  +E   +H 
Sbjct: 679  NLTSFPKLYLPNKEDFLIIETGASNEFWGGVLKVKTAETEEICKYTSGSFKTAE-KNYHS 737

Query: 45   NEKEFFAVR 19
            NEKE  AV+
Sbjct: 738  NEKELLAVK 746


>emb|CAH68829.1| polyprotein [Carnation etched ring virus]
          Length = 656

 Score =  105 bits (262), Expect = 1e-23
 Identities = 53/131 (40%), Positives = 78/131 (59%)
 Frame = -2

Query: 414 IQGFPDTLKDKKQLQSFLGVVNFAGMFINNLAYYRKVFSPLLKKDAVFKWEDEHQEGIKQ 235
           I  FPD ++DKKQLQ  LG++ +A  +I  LA  RK     LK+D+ + W D   + + +
Sbjct: 448 IHKFPDRIEDKKQLQRSLGILTYASDYIPKLASIRKPLQSKLKEDSTWTWNDTDSQYMAK 507

Query: 234 LKEVCKKLPKLAIPQDEDELVLYTDASDDWWAAVLTKVTPNEEVPCRYCSGLFTPSEATR 55
           +K+  K  PKL  P+  D+LV+ TDAS+++W  +L  +  + E  CRY SG F  +E   
Sbjct: 508 IKKNLKSFPKLYHPEPNDKLVIETDASEEFWGGILKAIHNSHEYICRYASGSFKAAE-RN 566

Query: 54  WHINEKEFFAV 22
           +H NEKE  AV
Sbjct: 567 YHSNEKELLAV 577