BLASTX nr result
ID: Rehmannia32_contig00018059
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00018059
(508 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019184983.1| PREDICTED: uncharacterized protein LOC109179... 69 1e-11
ref|XP_019235936.1| PREDICTED: replication protein A 70 kDa DNA-... 70 8e-11
ref|XP_016515041.1| PREDICTED: replication protein A 70 kDa DNA-... 66 1e-09
ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-... 66 1e-09
ref|XP_019237662.1| PREDICTED: replication factor A protein 1-li... 60 3e-08
ref|XP_016181428.1| replication protein A 70 kDa DNA-binding sub... 59 1e-07
gb|PHT68766.1| hypothetical protein T459_28253 [Capsicum annuum] 58 3e-07
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-... 58 5e-07
ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214... 57 7e-07
ref|XP_016438665.1| PREDICTED: uncharacterized protein LOC107764... 58 1e-06
ref|XP_020979807.1| uncharacterized protein LOC110272217 [Arachi... 56 5e-06
>ref|XP_019184983.1| PREDICTED: uncharacterized protein LOC109179963 [Ipomoea nil]
Length = 156
Score = 69.3 bits (168), Expect = 1e-11
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Frame = +1
Query: 238 VGSFWVCATV--ISFFGEWWYISCKKCPKKLTKAGEKFYCERCDAFYTSGNFRY 393
VGS+WV AT+ I G+WWY+SCK+CP KL +A FYC++ D Y GNF Y
Sbjct: 77 VGSYWVLATILPIQTIGDWWYLSCKRCPIKLEQASNCFYCDKFDNSYPDGNFWY 130
>ref|XP_019235936.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana attenuata]
Length = 365
Score = 69.7 bits (169), Expect = 8e-11
Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 7/152 (4%)
Frame = +1
Query: 10 TSNNETHSISHITVPSSRT--VADDLASGEAPVRTIEELYSSKEVXXXXXXXXXXXXXFQ 183
TS NE +S +PS R+ V+D+LA+G V+TI EL E
Sbjct: 95 TSVNEANSARISQIPSQRSYSVSDELANGTVEVKTISELVDCMEE--------------- 139
Query: 184 FSIMKTXXXXXXXXXXXXVGSFWVCATVISFF--GEWWYISCKKCPKKLTKAGEKFYCER 357
G W+ ATV++ EW Y+ CK+C KK+ K G KF+C++
Sbjct: 140 -------------------GHIWIVATVVNLLLEKEWSYLGCKRCSKKVDKIGSKFHCKK 180
Query: 358 CDAFYTSGNFRYL*IKYCIVN---FINIYLFD 444
CD + G RY ++ +++ FIN+ L+D
Sbjct: 181 CDRLDSFGTHRYK-LRVQVMDHTGFINLLLWD 211
>ref|XP_016515041.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana tabacum]
Length = 302
Score = 66.2 bits (160), Expect = 1e-09
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = +1
Query: 13 SNNETHSISHITVPSSRT--VADDLASGEAPVRTIEELYSSKEVXXXXXXXXXXXXXFQF 186
S NE +S +PS R+ V+D LA+G V+TI EL + E
Sbjct: 182 SVNEANSARISQIPSQRSYSVSDKLATGTVEVKTIRELVNCMEE---------------- 225
Query: 187 SIMKTXXXXXXXXXXXXVGSFWVCATVISFF--GEWWYISCKKCPKKLTKAGEKFYCERC 360
G W+ ATV++ EW Y+ CKKC KK+ K G KF+C++C
Sbjct: 226 ------------------GHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGNKFHCKKC 267
Query: 361 DAFYTSGNFRY 393
D +S RY
Sbjct: 268 DRLDSSATHRY 278
>ref|XP_009761074.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like
[Nicotiana sylvestris]
Length = 302
Score = 66.2 bits (160), Expect = 1e-09
Identities = 42/131 (32%), Positives = 58/131 (44%), Gaps = 4/131 (3%)
Frame = +1
Query: 13 SNNETHSISHITVPSSRT--VADDLASGEAPVRTIEELYSSKEVXXXXXXXXXXXXXFQF 186
S NE +S +PS R+ V+D LA+G V+TI EL + E
Sbjct: 182 SVNEANSARISQIPSQRSYSVSDKLATGTVEVKTIRELVNCMEE---------------- 225
Query: 187 SIMKTXXXXXXXXXXXXVGSFWVCATVISFF--GEWWYISCKKCPKKLTKAGEKFYCERC 360
G W+ ATV++ EW Y+ CKKC KK+ K G KF+C++C
Sbjct: 226 ------------------GHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGNKFHCKKC 267
Query: 361 DAFYTSGNFRY 393
D +S RY
Sbjct: 268 DRLDSSATHRY 278
>ref|XP_019237662.1| PREDICTED: replication factor A protein 1-like [Nicotiana
attenuata]
Length = 144
Score = 59.7 bits (143), Expect = 3e-08
Identities = 28/73 (38%), Positives = 45/73 (61%), Gaps = 5/73 (6%)
Frame = +1
Query: 241 GSFWVCATVISFF--GEWWYISCKKCPKKLTKAGEKFYCERCDAFYTSGNFRYL*IKYCI 414
G W+ ATV++ EW Y+ CK+C KK+ K G KF+C++CD + G RY ++ +
Sbjct: 7 GHIWIVATVVNLLLEKEWSYLGCKRCSKKVDKIGSKFHCKKCDRLDSFGTHRYK-LRVQV 65
Query: 415 VN---FINIYLFD 444
++ FIN+ L+D
Sbjct: 66 MDHTGFINLLLWD 78
>ref|XP_016181428.1| replication protein A 70 kDa DNA-binding subunit B-like isoform X2
[Arachis ipaensis]
Length = 183
Score = 59.3 bits (142), Expect = 1e-07
Identities = 36/135 (26%), Positives = 62/135 (45%), Gaps = 4/135 (2%)
Frame = +1
Query: 1 RIRTSNNETHSISHITVPSSRTVADDLASGEAPVRTIEELYSSKEVXXXXXXXXXXXXXF 180
R+ + + + IS ++ R+ AD+L +G+ V+TIEE+ SS +
Sbjct: 40 RLSSKPSNSARISQVSSRGPRSGADELRNGDVVVKTIEEVLSSTQE-------------- 85
Query: 181 QFSIMKTXXXXXXXXXXXXVGSFWVCATVISFFG---EWWYISCKKCPKKL-TKAGEKFY 348
G W+ T++S +W+Y SC+KCPKK+ T G ++
Sbjct: 86 --------------------GPTWIAGTIVSINAGKDDWFYKSCRKCPKKVDTPIGNRYE 125
Query: 349 CERCDAFYTSGNFRY 393
CE+C + S +FR+
Sbjct: 126 CEKCGHTHGSASFRF 140
>gb|PHT68766.1| hypothetical protein T459_28253 [Capsicum annuum]
Length = 182
Score = 57.8 bits (138), Expect = 3e-07
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 2/53 (3%)
Frame = +1
Query: 241 GSFWVCATVISFFGE--WWYISCKKCPKKLTKAGEKFYCERCDAFYTSGNFRY 393
G+FW+ AT++ E W Y++CKKC +K+ K G KF+C++CD S +RY
Sbjct: 38 GNFWIYATILHVEVENRWSYMACKKCTRKIDKLGNKFHCKKCDRLDHSATYRY 90
>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
partial [Nicotiana sylvestris]
Length = 244
Score = 58.2 bits (139), Expect = 5e-07
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Frame = +1
Query: 241 GSFWVCATVISFF--GEWWYISCKKCPKKLTKAGEKFYCERCDAFYTSGNFRYL*IKYCI 414
G W+ ATV++ EW Y+ CKKC KK+ K G KF+C++CD +S RY K+ +
Sbjct: 19 GHIWIVATVVNLLLEKEWSYLGCKKCSKKVDKIGSKFHCKKCDRLDSSVTHRY---KFRV 75
Query: 415 -----VNFINIYLFD 444
FI++ L+D
Sbjct: 76 QVMDHTGFISLLLWD 90
>ref|XP_009762854.1| PREDICTED: uncharacterized protein LOC104214830 [Nicotiana
sylvestris]
Length = 213
Score = 57.4 bits (137), Expect = 7e-07
Identities = 33/122 (27%), Positives = 53/122 (43%), Gaps = 2/122 (1%)
Frame = +1
Query: 4 IRTSNNETHSISHITVPSSRTVADDLASGEAPVRTIEELYSSKEVXXXXXXXXXXXXXFQ 183
+ + I+ I+ + +VA+ LASG V+ +E+L +
Sbjct: 41 VSVRRESSQRITQISSQKTHSVANKLASGSIEVKNVEDLSDCNHL--------------- 85
Query: 184 FSIMKTXXXXXXXXXXXXVGSFWVCATVISFFGE--WWYISCKKCPKKLTKAGEKFYCER 357
G++WV AT+I + W Y++CK C KKL KAG KFYC++
Sbjct: 86 -------------------GNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKK 126
Query: 358 CD 363
C+
Sbjct: 127 CE 128
>ref|XP_016438665.1| PREDICTED: uncharacterized protein LOC107764584 [Nicotiana tabacum]
Length = 405
Score = 57.8 bits (138), Expect = 1e-06
Identities = 36/132 (27%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Frame = +1
Query: 4 IRTSNNETHSISHITVPSSRTVADDLASGEAPVRTIEELYSSKEVXXXXXXXXXXXXXFQ 183
+ + I+ I+ + +VA+ LASG V+ +E+L +
Sbjct: 233 VSVRRESSQRITQISSQKTHSVANKLASGSIEVKNVEDLSDCNHL--------------- 277
Query: 184 FSIMKTXXXXXXXXXXXXVGSFWVCATVISFFGE--WWYISCKKCPKKLTKAGEKFYCER 357
G++WV AT+I + W Y++CK C KKL KAG KFYC++
Sbjct: 278 -------------------GNYWVVATIIHVELDRGWCYLACKNCSKKLEKAGNKFYCKK 318
Query: 358 CDAFYTSGNFRY 393
C+ S RY
Sbjct: 319 CEQI-QSATHRY 329
>ref|XP_020979807.1| uncharacterized protein LOC110272217 [Arachis ipaensis]
Length = 322
Score = 55.8 bits (133), Expect = 5e-06
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 4/135 (2%)
Frame = +1
Query: 1 RIRTSNNETHSISHITVPSSRTVADDLASGEAPVRTIEELYSSKEVXXXXXXXXXXXXXF 180
R+ + + IS +T+ R+ AD++ +G+ V+TIEE SS +
Sbjct: 41 RLSGKPSNSTRISQVTLHGLRSSADEIKNGDVVVKTIEEALSSSQE-------------- 86
Query: 181 QFSIMKTXXXXXXXXXXXXVGSFWVCATVISFF---GEWWYISCKKCPKKL-TKAGEKFY 348
G W+ T++S +W+Y SC+KCPKK+ T G ++
Sbjct: 87 --------------------GPIWIAGTIVSINVGKDDWFYKSCRKCPKKVETPIGNRYE 126
Query: 349 CERCDAFYTSGNFRY 393
C +C + S + R+
Sbjct: 127 CGKCGHTHASASLRF 141