BLASTX nr result

ID: Rehmannia32_contig00017793 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00017793
         (399 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN15252.1| hypothetical protein CDL12_12104 [Handroanthus im...   100   7e-23
ref|XP_012834403.1| PREDICTED: glutamyl-tRNA reductase-binding p...    84   1e-16
gb|KZV43203.1| glutamyl-tRNA reductase-binding protein, chloropl...    74   9e-13
ref|XP_022859141.1| glutamyl-tRNA reductase-binding protein, chl...    71   9e-12
ref|NP_001312949.1| glutamyl-tRNA reductase-binding protein, chl...    59   1e-07
ref|XP_009622291.1| PREDICTED: glutamyl-tRNA reductase-binding p...    58   3e-07
ref|NP_001312248.1| glutamyl-tRNA reductase-binding protein, chl...    58   3e-07
emb|CDO97756.1| unnamed protein product [Coffea canephora]             58   4e-07
ref|XP_019193291.1| PREDICTED: glutamyl-tRNA reductase-binding p...    55   3e-06
emb|CBI25290.3| unnamed protein product, partial [Vitis vinifera]      54   9e-06
ref|XP_002274572.1| PREDICTED: glutamyl-tRNA reductase-binding p...    54   9e-06

>gb|PIN15252.1| hypothetical protein CDL12_12104 [Handroanthus impetiginosus]
          Length = 327

 Score =  100 bits (250), Expect = 7e-23
 Identities = 54/82 (65%), Positives = 59/82 (71%)
 Frame = -2

Query: 299 MLPHTRXXXXXXXXXXXXXTHFLKPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVS 120
           M  HT+             THF KPSVS SRP++RAFF PL K +R  IQPLKCSVSVVS
Sbjct: 1   MSTHTQSLTCGLSPSILPTTHFPKPSVSPSRPISRAFFKPL-KANRFLIQPLKCSVSVVS 59

Query: 119 DPPRLESTNNHKPFPAEVSRTI 54
           DPP+LE TNNHKPFPAEVSRTI
Sbjct: 60  DPPQLELTNNHKPFPAEVSRTI 81


>ref|XP_012834403.1| PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic
           [Erythranthe guttata]
 gb|EYU45933.1| hypothetical protein MIMGU_mgv1a009881mg [Erythranthe guttata]
          Length = 328

 Score = 84.0 bits (206), Expect = 1e-16
 Identities = 49/83 (59%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
 Frame = -2

Query: 299 MLPHTRXXXXXXXXXXXXXTHFLKPSVSLSRPVNR-AFFNPLIKTSRLRIQPLKCSVSVV 123
           M+PHT                F KPS SLSRPV R AFF PL K SRL IQPLKCSVSVV
Sbjct: 1   MIPHTHSPTSNLPPSILPAARFPKPSASLSRPVFRPAFFKPL-KPSRLFIQPLKCSVSVV 59

Query: 122 SDPPRLESTNNHKPFPAEVSRTI 54
           S+PP LE  NN KP  AEV+RT+
Sbjct: 60  SNPPNLELANNQKPVLAEVARTV 82


>gb|KZV43203.1| glutamyl-tRNA reductase-binding protein, chloroplastic [Dorcoceras
           hygrometricum]
          Length = 330

 Score = 73.6 bits (179), Expect = 9e-13
 Identities = 39/62 (62%), Positives = 42/62 (67%)
 Frame = -2

Query: 239 HFLKPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSR 60
           H   P VSLSRP NRAFF PL        +PLKCSVSV S+P  L+STN  KP PAEVSR
Sbjct: 21  HSPLPLVSLSRPRNRAFFGPLKANKLATRKPLKCSVSVSSEPLHLQSTNGQKPIPAEVSR 80

Query: 59  TI 54
           TI
Sbjct: 81  TI 82


>ref|XP_022859141.1| glutamyl-tRNA reductase-binding protein, chloroplastic [Olea
           europaea var. sylvestris]
          Length = 329

 Score = 70.9 bits (172), Expect = 9e-12
 Identities = 42/85 (49%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
 Frame = -2

Query: 299 MLPHTRXXXXXXXXXXXXXTHFLKPSVSLSRPVNRAFFNPLIKTS---RLRIQPLKCSVS 129
           MLP T+             THFL+PS    +P+   F +  ++T+   R  IQPLKCSVS
Sbjct: 1   MLPQTKFSISHLPPSIFPTTHFLRPSFPPLKPITLEFKS--LRTNPCHRFSIQPLKCSVS 58

Query: 128 VVSDPPRLESTNNHKPFPAEVSRTI 54
           VVS+P  LE T+N KPFPAEVSRTI
Sbjct: 59  VVSEPTNLELTSNPKPFPAEVSRTI 83


>ref|NP_001312949.1| glutamyl-tRNA reductase-binding protein, chloroplastic-like
           [Nicotiana tabacum]
 ref|XP_009758668.1| PREDICTED: uncharacterized protein LOC104211321 [Nicotiana
           sylvestris]
 gb|ADU60361.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score = 59.3 bits (142), Expect = 1e-07
 Identities = 33/59 (55%), Positives = 42/59 (71%)
 Frame = -2

Query: 230 KPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSRTI 54
           K ++ LS+  +RA F    K+ R  I PLKC+VSVVS+P + E TNN KP+PAEVSRTI
Sbjct: 17  KIALPLSKSWSRAQF-AFSKSPRFSIGPLKCAVSVVSEPIQSEKTNNGKPYPAEVSRTI 74


>ref|XP_009622291.1| PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic
           [Nicotiana tomentosiformis]
          Length = 320

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = -2

Query: 230 KPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSRTI 54
           K ++  S+  NRA F    K  R  I PL+C+VSVVS+P + E TNN KP+PAEVSRTI
Sbjct: 17  KVALPFSKSWNRAQFT-FPKCPRFSIGPLRCAVSVVSEPIQSEKTNNGKPYPAEVSRTI 74


>ref|NP_001312248.1| glutamyl-tRNA reductase-binding protein, chloroplastic-like
           [Nicotiana tabacum]
 gb|ADU60362.1| glutamyl-tRNA reductase binding protein [Nicotiana tabacum]
          Length = 320

 Score = 58.2 bits (139), Expect = 3e-07
 Identities = 32/59 (54%), Positives = 40/59 (67%)
 Frame = -2

Query: 230 KPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSRTI 54
           K ++  S+  NRA F    K  R  I PL+C+VSVVS+P + E TNN KP+PAEVSRTI
Sbjct: 17  KVALPFSKSWNRAQFT-FPKCPRFSIGPLRCAVSVVSEPIQSEKTNNGKPYPAEVSRTI 74


>emb|CDO97756.1| unnamed protein product [Coffea canephora]
          Length = 328

 Score = 57.8 bits (138), Expect = 4e-07
 Identities = 33/62 (53%), Positives = 41/62 (66%)
 Frame = -2

Query: 239 HFLKPSVSLSRPVNRAFFNPLIKTSRLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSR 60
           HF KPS+S+S+P           +S+  + P KCSVSVV +P    ST+NHKPFPAEVSR
Sbjct: 25  HFSKPSLSVSKPS---------PSSQFPVGPPKCSVSVVLEPGT--STDNHKPFPAEVSR 73

Query: 59  TI 54
           TI
Sbjct: 74  TI 75


>ref|XP_019193291.1| PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic
           [Ipomoea nil]
          Length = 338

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 35/85 (41%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
 Frame = -2

Query: 299 MLPHTRXXXXXXXXXXXXXTHFLKPSVSLSRPVNRAFFNPLIKTS---RLRIQPLKCSVS 129
           MLP TR              HF K S+ + +   R   +   K +   R   +P KCSVS
Sbjct: 1   MLPQTRTFTPHLPSPLLPAPHFHKTSLLVPKSPKRNQLSWSKKRNPCPRFSNRPPKCSVS 60

Query: 128 VVSDPPRLESTNNHKPFPAEVSRTI 54
           VVS+PP+ E  N+ +PFPAEVSRTI
Sbjct: 61  VVSEPPQSELANDGRPFPAEVSRTI 85


>emb|CBI25290.3| unnamed protein product, partial [Vitis vinifera]
          Length = 318

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/62 (53%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = -2

Query: 233 LKPSVSLSRPVNRAFFNPLIKTS--RLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSR 60
           L PS+ LS+P     F+P   T   +   Q LKCSVSV S+P  LE   N KPFPAEVSR
Sbjct: 12  LWPSLPLSKPTTITHFSPPKATPFRKSLFQTLKCSVSVASEPAHLELVRN-KPFPAEVSR 70

Query: 59  TI 54
           TI
Sbjct: 71  TI 72


>ref|XP_002274572.1| PREDICTED: glutamyl-tRNA reductase-binding protein, chloroplastic
           [Vitis vinifera]
          Length = 324

 Score = 53.9 bits (128), Expect = 9e-06
 Identities = 33/62 (53%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
 Frame = -2

Query: 233 LKPSVSLSRPVNRAFFNPLIKTS--RLRIQPLKCSVSVVSDPPRLESTNNHKPFPAEVSR 60
           L PS+ LS+P     F+P   T   +   Q LKCSVSV S+P  LE   N KPFPAEVSR
Sbjct: 18  LWPSLPLSKPTTITHFSPPKATPFRKSLFQTLKCSVSVASEPAHLELVRN-KPFPAEVSR 76

Query: 59  TI 54
           TI
Sbjct: 77  TI 78


Top