BLASTX nr result

ID: Rehmannia32_contig00016455 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00016455
         (411 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011096428.1| UBP1-associated protein 2C [Sesamum indicum]...    62   2e-08
gb|PIN19571.1| RNA-binding protein musashi/mRNA cleavage and pol...    59   2e-07
gb|PIN18822.1| RNA-binding protein musashi/mRNA cleavage and pol...    59   2e-07
ref|XP_019175980.1| PREDICTED: UBP1-associated protein 2C-like [...    57   1e-06
gb|KZV53213.1| hypothetical protein F511_21470 [Dorcoceras hygro...    56   2e-06
ref|XP_016558591.1| PREDICTED: UBP1-associated protein 2C-like [...    55   3e-06
gb|PHT60101.1| hypothetical protein CQW23_02464 [Capsicum baccatum]    53   4e-06
ref|XP_006359092.1| PREDICTED: UBP1-associated protein 2C-like [...    55   6e-06
ref|XP_009795836.1| PREDICTED: UBP1-associated protein 2C-like [...    54   8e-06

>ref|XP_011096428.1| UBP1-associated protein 2C [Sesamum indicum]
 ref|XP_011096429.1| UBP1-associated protein 2C [Sesamum indicum]
          Length = 412

 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 32/83 (38%), Positives = 36/83 (43%)
 Frame = +3

Query: 159 HQNASYNTAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRVPPSSI 338
           HQN+ YNTAM                                          YR+PP+SI
Sbjct: 309 HQNSGYNTAMGGPGGPGGQGYGGGYGGGASMYDGVGGTGPGEFGGGLGSAGGYRIPPTSI 368

Query: 339 GMQSSGGYPDSGNYGFQSAYPPQ 407
           GMQSSGGYPD GNYG Q+ YP Q
Sbjct: 369 GMQSSGGYPDGGNYGLQATYPSQ 391


>gb|PIN19571.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
           factor I complex, subunit HRP1 [Handroanthus
           impetiginosus]
          Length = 415

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 32/83 (38%), Positives = 36/83 (43%)
 Frame = +3

Query: 159 HQNASYNTAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRVPPSSI 338
           HQNAS+NTA+                                          YR+PPSSI
Sbjct: 309 HQNASFNTAIGGPGGPGGQGYGGGYGGGAPLYDGVGGAGPADYGGGLGNAGGYRMPPSSI 368

Query: 339 GMQSSGGYPDSGNYGFQSAYPPQ 407
           GMQSSGGYPD GNYG  + YP Q
Sbjct: 369 GMQSSGGYPDGGNYGIPTPYPSQ 391


>gb|PIN18822.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
           factor I complex, subunit HRP1 [Handroanthus
           impetiginosus]
          Length = 415

 Score = 58.9 bits (141), Expect = 2e-07
 Identities = 32/83 (38%), Positives = 36/83 (43%)
 Frame = +3

Query: 159 HQNASYNTAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYRVPPSSI 338
           HQNAS+NTA+                                          YR+PPSSI
Sbjct: 309 HQNASFNTAIGGPGGPGGQGYGGGYGGGAPLYDGVGGAGPGEYGGGLGNAGGYRMPPSSI 368

Query: 339 GMQSSGGYPDSGNYGFQSAYPPQ 407
           GMQSSGGYPD GNYG  + YP Q
Sbjct: 369 GMQSSGGYPDGGNYGIPTPYPSQ 391


>ref|XP_019175980.1| PREDICTED: UBP1-associated protein 2C-like [Ipomoea nil]
          Length = 436

 Score = 56.6 bits (135), Expect = 1e-06
 Identities = 27/35 (77%), Positives = 27/35 (77%), Gaps = 3/35 (8%)
 Frame = +3

Query: 315 YRVPPSSIGMQSSGGYPDSGNYGFQSAYP---PQP 410
           YRVPPSS GM SSGGYPD GNYG  SAYP   PQP
Sbjct: 383 YRVPPSSGGMPSSGGYPDGGNYGMPSAYPSQLPQP 417


>gb|KZV53213.1| hypothetical protein F511_21470 [Dorcoceras hygrometricum]
          Length = 405

 Score = 55.8 bits (133), Expect = 2e-06
 Identities = 23/29 (79%), Positives = 25/29 (86%)
 Frame = +3

Query: 315 YRVPPSSIGMQSSGGYPDSGNYGFQSAYP 401
           YR+PPSS+ MQSSG YPDS NYGFQ AYP
Sbjct: 355 YRMPPSSLAMQSSGSYPDSANYGFQQAYP 383


>ref|XP_016558591.1| PREDICTED: UBP1-associated protein 2C-like [Capsicum annuum]
          Length = 425

 Score = 55.5 bits (132), Expect = 3e-06
 Identities = 24/31 (77%), Positives = 25/31 (80%)
 Frame = +3

Query: 315 YRVPPSSIGMQSSGGYPDSGNYGFQSAYPPQ 407
           YR+P SS GM SSGGYPD GNYG QSAYP Q
Sbjct: 372 YRMPQSSAGMASSGGYPDGGNYGLQSAYPSQ 402


>gb|PHT60101.1| hypothetical protein CQW23_02464 [Capsicum baccatum]
          Length = 135

 Score = 53.1 bits (126), Expect = 4e-06
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +3

Query: 315 YRVPPSSIGMQSSGGYPDSGNYGFQSAYPPQ 407
           YR+P SS GM SSGGYPD GNYG Q AYP Q
Sbjct: 32  YRMPQSSAGMASSGGYPDGGNYGLQLAYPSQ 62


>ref|XP_006359092.1| PREDICTED: UBP1-associated protein 2C-like [Solanum tuberosum]
          Length = 424

 Score = 54.7 bits (130), Expect = 6e-06
 Identities = 25/35 (71%), Positives = 27/35 (77%), Gaps = 3/35 (8%)
 Frame = +3

Query: 315 YRVPPSSIGMQSSGGYPDSGNYGFQSAYP---PQP 410
           YR+P SS GM SSGGYPD GNYG QS+YP   PQP
Sbjct: 371 YRMPQSSAGMPSSGGYPDGGNYGLQSSYPSQVPQP 405


>ref|XP_009795836.1| PREDICTED: UBP1-associated protein 2C-like [Nicotiana sylvestris]
 ref|XP_009795837.1| PREDICTED: UBP1-associated protein 2C-like [Nicotiana sylvestris]
 ref|XP_016463636.1| PREDICTED: UBP1-associated protein 2C-like [Nicotiana tabacum]
          Length = 420

 Score = 54.3 bits (129), Expect = 8e-06
 Identities = 25/35 (71%), Positives = 26/35 (74%), Gaps = 3/35 (8%)
 Frame = +3

Query: 315 YRVPPSSIGMQSSGGYPDSGNYGFQSAYP---PQP 410
           YR+P SS GM SSGGYPD GNYG QS YP   PQP
Sbjct: 366 YRMPQSSAGMPSSGGYPDGGNYGLQSGYPSQVPQP 400


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