BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00015539
         (528 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKI79509.1| hypothetical protein CRG98_000140 [Punica granatum]     83   3e-17
gb|AAZ08467.1| RNA polymerase II second largest subunit, partial...    86   2e-16
ref|XP_009765276.1| PREDICTED: DNA-directed RNA polymerase II su...    86   4e-16
ref|XP_009605281.1| PREDICTED: DNA-directed RNA polymerase II su...    86   4e-16
ref|XP_016558259.1| PREDICTED: DNA-directed RNA polymerase II su...    86   4e-16
ref|XP_019162258.1| PREDICTED: DNA-directed RNA polymerase II su...    86   4e-16
ref|XP_019266160.1| PREDICTED: DNA-directed RNA polymerase II su...    86   4e-16
ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II su...    86   4e-16
ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II su...    86   4e-16
ref|XP_016499992.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    86   4e-16
ref|XP_016446527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...    86   4e-16
gb|PHT55951.1| DNA-directed RNA polymerase II subunit RPB2 [Caps...    86   4e-16
ref|XP_022012183.1| DNA-directed RNA polymerase II subunit RPB2 ...    85   6e-16
ref|XP_022036008.1| DNA-directed RNA polymerase II subunit RPB2-...    85   6e-16
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode...    85   6e-16
ref|XP_023744509.1| DNA-directed RNA polymerase II subunit RPB2 ...    85   8e-16
ref|XP_010057424.1| PREDICTED: DNA-directed RNA polymerase II su...    85   8e-16
gb|KCW74593.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus g...    85   8e-16
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh...    85   8e-16
gb|ADE76913.1| unknown [Picea sitchensis]                              79   1e-15

>gb|PKI79509.1| hypothetical protein CRG98_000140 [Punica granatum]
          Length = 134

 Score = 83.2 bits (204), Expect = 3e-17
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = +3

Query: 3   KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
           KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKDIK  KDQKKR
Sbjct: 90  KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDIKPVKDQKKR 132


>gb|AAZ08467.1| RNA polymerase II second largest subunit, partial [Linanthus
           californicus]
          Length = 733

 Score = 86.3 bits (212), Expect = 2e-16
 Identities = 41/43 (95%), Positives = 43/43 (100%)
 Frame = +3

Query: 3   KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
           KTDIVQVHIPYACKLLFQELMSMAIAPRM+TKDIKQAKDQKK+
Sbjct: 691 KTDIVQVHIPYACKLLFQELMSMAIAPRMMTKDIKQAKDQKKK 733


>ref|XP_009765276.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
            [Nicotiana sylvestris]
          Length = 1094

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1050 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1092


>ref|XP_009605281.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X2
            [Nicotiana tomentosiformis]
          Length = 1094

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1050 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1092


>ref|XP_016558259.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Capsicum
            annuum]
          Length = 1186

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1142 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1184


>ref|XP_019162258.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Ipomoea nil]
          Length = 1190

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1146 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1188


>ref|XP_019266160.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Nicotiana
            attenuata]
 gb|OIT05504.1| dna-directed rna polymerase ii subunit rpb2 [Nicotiana attenuata]
          Length = 1191

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1147 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1189


>ref|XP_009765275.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
            [Nicotiana sylvestris]
          Length = 1191

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1147 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1189


>ref|XP_009605280.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 isoform X1
            [Nicotiana tomentosiformis]
          Length = 1191

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1147 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1189


>ref|XP_016499992.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB2-like [Nicotiana tabacum]
          Length = 1193

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1149 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1191


>ref|XP_016446527.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
            subunit RPB2-like [Nicotiana tabacum]
          Length = 1197

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1153 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1195


>gb|PHT55951.1| DNA-directed RNA polymerase II subunit RPB2 [Capsicum baccatum]
 gb|PHT90529.1| DNA-directed RNA polymerase II subunit RPB2 [Capsicum annuum]
 gb|PHU26447.1| DNA-directed RNA polymerase II subunit RPB2 [Capsicum chinense]
          Length = 1207

 Score = 85.5 bits (210), Expect = 4e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELM+MAIAPRMLTKD+KQAKDQKK+
Sbjct: 1163 KTDIVQVHIPYACKLLFQELMAMAIAPRMLTKDVKQAKDQKKK 1205


>ref|XP_022012183.1| DNA-directed RNA polymerase II subunit RPB2 [Helianthus annuus]
 gb|OTF95378.1| putative DNA-directed RNA polymerase II subunit RPB2 [Helianthus
            annuus]
          Length = 1189

 Score = 85.1 bits (209), Expect = 6e-16
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKD KK+
Sbjct: 1145 KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDSKKK 1187


>ref|XP_022036008.1| DNA-directed RNA polymerase II subunit RPB2-like [Helianthus annuus]
 gb|OTG29600.1| putative DNA-directed RNA polymerase family protein [Helianthus
            annuus]
          Length = 1190

 Score = 85.1 bits (209), Expect = 6e-16
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKD KK+
Sbjct: 1146 KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDSKKK 1188


>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
          Length = 1191

 Score = 85.1 bits (209), Expect = 6e-16
 Identities = 40/43 (93%), Positives = 43/43 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKD+KQAKD+KK+
Sbjct: 1147 KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDVKQAKDKKKK 1189


>ref|XP_023744509.1| DNA-directed RNA polymerase II subunit RPB2 [Lactuca sativa]
 gb|PLY65646.1| hypothetical protein LSAT_7X21221 [Lactuca sativa]
          Length = 1189

 Score = 84.7 bits (208), Expect = 8e-16
 Identities = 40/43 (93%), Positives = 42/43 (97%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKD+KQAKD KK+
Sbjct: 1145 KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDVKQAKDSKKK 1187


>ref|XP_010057424.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Eucalyptus
            grandis]
 gb|KCW74594.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus grandis]
          Length = 1196

 Score = 84.7 bits (208), Expect = 8e-16
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIK AKDQKK+
Sbjct: 1152 KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKPAKDQKKK 1194


>gb|KCW74593.1| hypothetical protein EUGRSUZ_E03313 [Eucalyptus grandis]
          Length = 1197

 Score = 84.7 bits (208), Expect = 8e-16
 Identities = 41/43 (95%), Positives = 42/43 (97%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
            KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIK AKDQKK+
Sbjct: 1153 KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKPAKDQKKK 1195


>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
          Length = 1200

 Score = 84.7 bits (208), Expect = 8e-16
 Identities = 40/44 (90%), Positives = 44/44 (100%)
 Frame = +3

Query: 3    KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKRA 134
            KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQ+K+Q+K+A
Sbjct: 1156 KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQSKEQRKKA 1199


>gb|ADE76913.1| unknown [Picea sitchensis]
          Length = 135

 Score = 79.3 bits (194), Expect = 1e-15
 Identities = 36/43 (83%), Positives = 41/43 (95%)
 Frame = +3

Query: 3   KTDIVQVHIPYACKLLFQELMSMAIAPRMLTKDIKQAKDQKKR 131
           KTDIVQVHIPYACKLLFQELM+MAIAPRM TK++K+ KDQKK+
Sbjct: 90  KTDIVQVHIPYACKLLFQELMAMAIAPRMFTKEVKELKDQKKK 132