BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00015343
         (1692 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011094631.1| RNA polymerase sigma factor sigF, chloroplas...   805   0.0  
ref|XP_011094632.1| RNA polymerase sigma factor sigF, chloroplas...   782   0.0  
ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF,...   780   0.0  
ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF,...   776   0.0  
gb|PIN23381.1| hypothetical protein CDL12_03889 [Handroanthus im...   743   0.0  
gb|KZV34129.1| RNA polymerase sigma factor sigF, chloroplastic [...   647   0.0  
emb|CDP06761.1| unnamed protein product [Coffea canephora]            620   0.0  
ref|XP_023900784.1| RNA polymerase sigma factor sigF, chloroplas...   619   0.0  
ref|XP_019250683.1| PREDICTED: RNA polymerase sigma factor sigF,...   608   0.0  
ref|XP_009794385.1| PREDICTED: RNA polymerase sigma factor sigF,...   608   0.0  
ref|XP_009794392.1| PREDICTED: RNA polymerase sigma factor sigF,...   605   0.0  
ref|XP_016487689.1| PREDICTED: RNA polymerase sigma factor sigF,...   605   0.0  
ref|XP_009621232.1| PREDICTED: RNA polymerase sigma factor sigF,...   604   0.0  
gb|AKC88770.1| sigma factor [Francoa sonchifolia]                     604   0.0  
ref|XP_019077288.1| PREDICTED: RNA polymerase sigma factor sigF,...   603   0.0  
emb|CBI32760.3| unnamed protein product, partial [Vitis vinifera]     602   0.0  
ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF,...   602   0.0  
ref|XP_021827463.1| RNA polymerase sigma factor sigF, chloroplas...   593   0.0  
ref|XP_020422239.1| RNA polymerase sigma factor sigF, chloroplas...   594   0.0  
ref|XP_008243975.1| PREDICTED: RNA polymerase sigma factor sigF,...   594   0.0  

>ref|XP_011094631.1| RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Sesamum
            indicum]
          Length = 561

 Score =  805 bits (2079), Expect = 0.0
 Identities = 411/514 (79%), Positives = 450/514 (87%), Gaps = 10/514 (1%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESRPLLCLKADSTYQ--QTLDKRQLLMAPGLSSREGNKNVDPDEYV 1515
            R  PTSVL QDQ NESR +LC K DS +Q  QTL  RQ +MAP  SS +GN NVDPD+YV
Sbjct: 48   RHSPTSVLTQDQHNESRSMLCSKEDSVFQLKQTLGMRQAVMAPASSSNDGNGNVDPDQYV 107

Query: 1514 NDFQLQLLRRPELWYLWASLQKEEQSFSSTSVNL-------MGVEADHVVALAREAFSAC 1356
            N+FQLQLLRRPELWYLW SLQ +EQ FS T  ++       + VEAD VVALAREAFSAC
Sbjct: 108  NEFQLQLLRRPELWYLWPSLQTKEQLFSMTMESISNKNEKFIDVEADRVVALAREAFSAC 167

Query: 1355 KEAASIAKDARLFGAHLDDPSSIRGLASVPVRRIVRSTRLLERQTKRR-VPKPKIEIQET 1179
            KEAA+I KDA LFGA LDD SSIR L  VP +R VRSTRL+ERQ KRR VPKPKIE+QET
Sbjct: 168  KEAAAIVKDAELFGARLDDSSSIRSLTGVPAQRTVRSTRLVERQMKRRRVPKPKIEVQET 227

Query: 1178 NHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRSRL 999
            NHRRKPES RK +EGFDPNDPLR+FL GPET QLLT+KEESELIVKIQELM+LQE++SRL
Sbjct: 228  NHRRKPESQRKSDEGFDPNDPLRLFLRGPETRQLLTSKEESELIVKIQELMRLQEMKSRL 287

Query: 998  ETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGLSL 819
            + QFSREPTLVEWA AAG SC  LQSQ+HCG+SSR KLI ANFRMVVHIAKQYQGRGLSL
Sbjct: 288  KVQFSREPTLVEWAAAAGISCQALQSQIHCGDSSRQKLICANFRMVVHIAKQYQGRGLSL 347

Query: 818  QDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLS 639
            QDLLQEGSMGLM+SVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLS
Sbjct: 348  QDLLQEGSMGLMRSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLS 407

Query: 638  KVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTYQE 459
            +VYEAKK C+QQGNH PTKEDIAACAG+SVE LE+LLYTAR+PLS+Q+PVW DQ+TT+QE
Sbjct: 408  RVYEAKKLCIQQGNHLPTKEDIAACAGMSVEGLERLLYTARMPLSLQKPVWTDQDTTFQE 467

Query: 458  ITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFG 279
            ITADTTIEVP+VG +KQ+MRQH RNLLSVL+PRERKIIRLRFGIE GEQKSLSEIGAGFG
Sbjct: 468  ITADTTIEVPDVGVAKQLMRQHIRNLLSVLSPRERKIIRLRFGIEHGEQKSLSEIGAGFG 527

Query: 278  LSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            LSKERVRQLESRALYKLKQCL S GL AYA+M+I
Sbjct: 528  LSKERVRQLESRALYKLKQCLGSHGLAAYANMII 561


>ref|XP_011094632.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Sesamum
            indicum]
 ref|XP_011094633.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Sesamum
            indicum]
          Length = 496

 Score =  782 bits (2019), Expect = 0.0
 Identities = 398/496 (80%), Positives = 437/496 (88%), Gaps = 10/496 (2%)
 Frame = -2

Query: 1634 LLCLKADSTYQ--QTLDKRQLLMAPGLSSREGNKNVDPDEYVNDFQLQLLRRPELWYLWA 1461
            +LC K DS +Q  QTL  RQ +MAP  SS +GN NVDPD+YVN+FQLQLLRRPELWYLW 
Sbjct: 1    MLCSKEDSVFQLKQTLGMRQAVMAPASSSNDGNGNVDPDQYVNEFQLQLLRRPELWYLWP 60

Query: 1460 SLQKEEQSFSSTSVNL-------MGVEADHVVALAREAFSACKEAASIAKDARLFGAHLD 1302
            SLQ +EQ FS T  ++       + VEAD VVALAREAFSACKEAA+I KDA LFGA LD
Sbjct: 61   SLQTKEQLFSMTMESISNKNEKFIDVEADRVVALAREAFSACKEAAAIVKDAELFGARLD 120

Query: 1301 DPSSIRGLASVPVRRIVRSTRLLERQTKRR-VPKPKIEIQETNHRRKPESHRKFNEGFDP 1125
            D SSIR L  VP +R VRSTRL+ERQ KRR VPKPKIE+QETNHRRKPES RK +EGFDP
Sbjct: 121  DSSSIRSLTGVPAQRTVRSTRLVERQMKRRRVPKPKIEVQETNHRRKPESQRKSDEGFDP 180

Query: 1124 NDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRSRLETQFSREPTLVEWAEAAG 945
            NDPLR+FL GPET QLLT+KEESELIVKIQELM+LQE++SRL+ QFSREPTLVEWA AAG
Sbjct: 181  NDPLRLFLRGPETRQLLTSKEESELIVKIQELMRLQEMKSRLKVQFSREPTLVEWAAAAG 240

Query: 944  TSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKF 765
             SC  LQSQ+HCG+SSR KLI ANFRMVVHIAKQYQGRGLSLQDLLQEGSMGLM+SVEKF
Sbjct: 241  ISCQALQSQIHCGDSSRQKLICANFRMVVHIAKQYQGRGLSLQDLLQEGSMGLMRSVEKF 300

Query: 764  KPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLSKVYEAKKSCVQQGNHYPT 585
            KPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLS+VYEAKK C+QQGNH PT
Sbjct: 301  KPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLSRVYEAKKLCIQQGNHLPT 360

Query: 584  KEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTYQEITADTTIEVPEVGASKQI 405
            KEDIAACAG+SVE LE+LLYTAR+PLS+Q+PVW DQ+TT+QEITADTTIEVP+VG +KQ+
Sbjct: 361  KEDIAACAGMSVEGLERLLYTARMPLSLQKPVWTDQDTTFQEITADTTIEVPDVGVAKQL 420

Query: 404  MRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 225
            MRQH RNLLSVL+PRERKIIRLRFGIE GEQKSLSEIGAGFGLSKERVRQLESRALYKLK
Sbjct: 421  MRQHIRNLLSVLSPRERKIIRLRFGIEHGEQKSLSEIGAGFGLSKERVRQLESRALYKLK 480

Query: 224  QCLSSQGLEAYADMLI 177
            QCL S GL AYA+M+I
Sbjct: 481  QCLGSHGLAAYANMII 496


>ref|XP_012840943.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Erythranthe guttata]
 gb|EYU34473.1| hypothetical protein MIMGU_mgv1a003862mg [Erythranthe guttata]
          Length = 559

 Score =  780 bits (2015), Expect = 0.0
 Identities = 394/513 (76%), Positives = 445/513 (86%), Gaps = 9/513 (1%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESRPLLCLKADSTYQQTLDKRQLLMAPGLSS-REGNKNVDPDEYVN 1512
            R   TSVLIQDQRNESRPLL LK D+T+QQT D+RQ++  P  SS  EGN  +DPD+Y N
Sbjct: 51   RHTTTSVLIQDQRNESRPLLSLKDDNTFQQTFDRRQMVTTPASSSSNEGNDKIDPDQYDN 110

Query: 1511 DFQLQLLRRPELWYLWASLQKEEQSFS--------STSVNLMGVEADHVVALAREAFSAC 1356
            D QLQLLRRPELWYLW+SLQK+E  F         ST+ N+ G EA+HV+ALAREAFSAC
Sbjct: 111  DLQLQLLRRPELWYLWSSLQKKEHPFPTTTPNSLPSTAENVTGAEANHVLALAREAFSAC 170

Query: 1355 KEAASIAKDARLFGAHLDDPSSIRGLASVPVRRIVRSTRLLERQTKRRVPKPKIEIQETN 1176
            KEAASIA+DARL+    D+ SS R L   PV+RIVRS R LERQ KRR PKP++E QE N
Sbjct: 171  KEAASIAEDARLY----DNSSSTRSLVGSPVQRIVRSKRRLERQAKRRAPKPQLEDQEMN 226

Query: 1175 HRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRSRLE 996
            HRRK E H+K +EG+DPNDPLR+FLWGPETTQLL+AKEE++LI KIQELMKLQEVRSRL+
Sbjct: 227  HRRKLEPHKKSSEGYDPNDPLRLFLWGPETTQLLSAKEEADLIAKIQELMKLQEVRSRLQ 286

Query: 995  TQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGLSLQ 816
            TQFSREPTLVEWA A G S   LQ QV+CGN SR+KLIYANFR+VV+IAKQYQGRGL+LQ
Sbjct: 287  TQFSREPTLVEWAAAVGISTQALQFQVNCGNFSREKLIYANFRLVVYIAKQYQGRGLNLQ 346

Query: 815  DLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLSK 636
            DLLQ GSMGLMKSVEKFKP  GCRFATYAYWWIRQSIRK+LFQHSRTIRLPENVY+LLSK
Sbjct: 347  DLLQLGSMGLMKSVEKFKPLVGCRFATYAYWWIRQSIRKSLFQHSRTIRLPENVYTLLSK 406

Query: 635  VYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTYQEI 456
            VYEAKK+C++QGNH PTKEDIAA AGLSVE+L++LLYT+RVPLSMQ+PVWMDQ+TT+QEI
Sbjct: 407  VYEAKKTCIKQGNHQPTKEDIAAAAGLSVEKLDRLLYTSRVPLSMQKPVWMDQDTTFQEI 466

Query: 455  TADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGL 276
            TADT +E P+VGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIE GEQKSLS+IGAGFGL
Sbjct: 467  TADTAVEAPDVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEDGEQKSLSDIGAGFGL 526

Query: 275  SKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            SKER+RQ+ESRALYKLKQCLSS GL AYA+ML+
Sbjct: 527  SKERIRQIESRALYKLKQCLSSHGLSAYAEMLV 559


>ref|XP_012840944.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Erythranthe guttata]
          Length = 558

 Score =  776 bits (2005), Expect = 0.0
 Identities = 393/513 (76%), Positives = 443/513 (86%), Gaps = 9/513 (1%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESRPLLCLKADSTYQQTLDKRQLLMAPGLSS-REGNKNVDPDEYVN 1512
            R   TSVLIQDQRNESRPLL LK D+T+QQT D+RQ++  P  SS  EGN  +DPD+Y N
Sbjct: 51   RHTTTSVLIQDQRNESRPLLSLKDDNTFQQTFDRRQMVTTPASSSSNEGNDKIDPDQYDN 110

Query: 1511 DFQLQLLRRPELWYLWASLQKEEQSFS--------STSVNLMGVEADHVVALAREAFSAC 1356
            D QLQLLRRPELWYLW+SLQK+E  F         ST+ N+ G EA+HV+ALAREAFSAC
Sbjct: 111  DLQLQLLRRPELWYLWSSLQKKEHPFPTTTPNSLPSTAENVTGAEANHVLALAREAFSAC 170

Query: 1355 KEAASIAKDARLFGAHLDDPSSIRGLASVPVRRIVRSTRLLERQTKRRVPKPKIEIQETN 1176
            KEAASIA+DARL+     D SS   L   PV+RIVRS R LERQ KRR PKP++E QE N
Sbjct: 171  KEAASIAEDARLY-----DNSSSTSLVGSPVQRIVRSKRRLERQAKRRAPKPQLEDQEMN 225

Query: 1175 HRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRSRLE 996
            HRRK E H+K +EG+DPNDPLR+FLWGPETTQLL+AKEE++LI KIQELMKLQEVRSRL+
Sbjct: 226  HRRKLEPHKKSSEGYDPNDPLRLFLWGPETTQLLSAKEEADLIAKIQELMKLQEVRSRLQ 285

Query: 995  TQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGLSLQ 816
            TQFSREPTLVEWA A G S   LQ QV+CGN SR+KLIYANFR+VV+IAKQYQGRGL+LQ
Sbjct: 286  TQFSREPTLVEWAAAVGISTQALQFQVNCGNFSREKLIYANFRLVVYIAKQYQGRGLNLQ 345

Query: 815  DLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLSK 636
            DLLQ GSMGLMKSVEKFKP  GCRFATYAYWWIRQSIRK+LFQHSRTIRLPENVY+LLSK
Sbjct: 346  DLLQLGSMGLMKSVEKFKPLVGCRFATYAYWWIRQSIRKSLFQHSRTIRLPENVYTLLSK 405

Query: 635  VYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTYQEI 456
            VYEAKK+C++QGNH PTKEDIAA AGLSVE+L++LLYT+RVPLSMQ+PVWMDQ+TT+QEI
Sbjct: 406  VYEAKKTCIKQGNHQPTKEDIAAAAGLSVEKLDRLLYTSRVPLSMQKPVWMDQDTTFQEI 465

Query: 455  TADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGL 276
            TADT +E P+VGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIE GEQKSLS+IGAGFGL
Sbjct: 466  TADTAVEAPDVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEDGEQKSLSDIGAGFGL 525

Query: 275  SKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            SKER+RQ+ESRALYKLKQCLSS GL AYA+ML+
Sbjct: 526  SKERIRQIESRALYKLKQCLSSHGLSAYAEMLV 558


>gb|PIN23381.1| hypothetical protein CDL12_03889 [Handroanthus impetiginosus]
          Length = 547

 Score =  743 bits (1919), Expect = 0.0
 Identities = 378/515 (73%), Positives = 435/515 (84%), Gaps = 11/515 (2%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESRPLLCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVND 1509
            R PPTSVLIQD RNESR +L  K D++ +QT+D+R +++ P  SS E NKN  PD+Y+N+
Sbjct: 34   RHPPTSVLIQDNRNESRMILSSKEDNSLKQTIDRRLVVVGPASSSNEKNKNFHPDQYLNE 93

Query: 1508 FQLQLLRRPELWYLWASLQKEEQSFSSTSVNL-------MGVEADHVVALAREAFSACKE 1350
            FQLQLLR PELWYLW SL ++EQ F ++  +L        G EA+ VVALA+EA SA +E
Sbjct: 94   FQLQLLRMPELWYLWPSLHRKEQYFPTSKESLPYKGEKFTGAEANRVVALAKEALSASQE 153

Query: 1349 AASIAKDARLFGAHLDDPSSI---RGLASVPVRRIVRSTRLLERQTKRR-VPKPKIEIQE 1182
            AASI+KDA LFG HLDD  S+   RGLA+ PV+ +VRS R LE Q KRR VPKP IE+Q+
Sbjct: 154  AASISKDAELFGDHLDDSFSLSLLRGLANAPVKNVVRSKRRLEMQAKRRRVPKPNIEVQQ 213

Query: 1181 TNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRSR 1002
            TNH +K E  RK +EGFD NDPLR+FL G ET QLLTAKEESELIVKIQELMKLQEVRS 
Sbjct: 214  TNHHKKAELRRKLDEGFDQNDPLRLFLGG-ETRQLLTAKEESELIVKIQELMKLQEVRSC 272

Query: 1001 LETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGLS 822
            L+TQF REPTLVEWA A G SC  L+SQ+HCGNSSR+KLIYANFRMVVHIAKQYQGRG+S
Sbjct: 273  LQTQFCREPTLVEWAAAIGISCQALRSQIHCGNSSREKLIYANFRMVVHIAKQYQGRGVS 332

Query: 821  LQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLL 642
            LQDLLQEGSMGLM+SVEKFKPQAGCRFATYAYWWIRQSIRKALF++SRTIRLPEN+Y  L
Sbjct: 333  LQDLLQEGSMGLMRSVEKFKPQAGCRFATYAYWWIRQSIRKALFRYSRTIRLPENMYGHL 392

Query: 641  SKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTYQ 462
            +KV+EAKK C Q+GNH+PTKEDIAACAG++VE+LE LLYTAR+PLSMQQ VW DQ+TTYQ
Sbjct: 393  TKVHEAKKLCFQKGNHHPTKEDIAACAGMTVEKLETLLYTARLPLSMQQTVWTDQDTTYQ 452

Query: 461  EITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGF 282
            EITADT IE+P++  SKQ+MRQH RNLLSVLNPRERKIIRLRFGIE G+ KSLSEIG GF
Sbjct: 453  EITADTAIEIPDIAVSKQLMRQHVRNLLSVLNPRERKIIRLRFGIEDGKLKSLSEIGDGF 512

Query: 281  GLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            GL+KERVRQLESRA+YKLKQCL SQGLEAYAD+L+
Sbjct: 513  GLTKERVRQLESRAMYKLKQCLGSQGLEAYADLLV 547


>gb|KZV34129.1| RNA polymerase sigma factor sigF, chloroplastic [Dorcoceras
            hygrometricum]
          Length = 492

 Score =  647 bits (1668), Expect = 0.0
 Identities = 336/486 (69%), Positives = 392/486 (80%), Gaps = 10/486 (2%)
 Frame = -2

Query: 1604 QQTLDKRQLLMAPGLSSREGNKNVDPDEYVNDFQLQLLRRPELWYLWASLQKEE------ 1443
            ++TLD+R  ++AP   S E + N+  DEYV DF+LQL     L YLW SL  +E      
Sbjct: 8    KETLDRRLRVVAPASPSNEDDNNLATDEYVRDFRLQLQHWQSLSYLWPSLHGKELPSKKT 67

Query: 1442 -QSFSSTSVNLMGVEADHVVALAREAFSACKEAASIAKDARLFGAHLDDPSSIRGLASVP 1266
              S SS    L+GVEADHVVALAREA  ACKEAASI K   LF AHL +   + GLA+  
Sbjct: 68   ITSVSSKGETLIGVEADHVVALAREALYACKEAASIVKYTNLFEAHLHNLPDLIGLANTS 127

Query: 1265 VR--RIVRSTRLLERQTK-RRVPKPKIEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWG 1095
            +R  R+VRSTRLLER+TK RR+P+ +IE+QETNH RK ES  K + GFD ND L+MFL G
Sbjct: 128  LRHKRMVRSTRLLERRTKQRRLPELRIEVQETNHHRKRESSGK-SGGFDSNDSLQMFLGG 186

Query: 1094 PETTQLLTAKEESELIVKIQELMKLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQV 915
             ET QLLTA+EESELI KIQELMKLQEVR+ L TQFSREPT+VEWA A G S   L+S++
Sbjct: 187  SETRQLLTAEEESELISKIQELMKLQEVRNMLRTQFSREPTVVEWAAAIGISSQALRSEL 246

Query: 914  HCGNSSRDKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFAT 735
            HCGNSSR++LIYANFR+VVH+AKQYQGRGL+  DLLQEGS+GLM+SVEKFKPQ GCRFAT
Sbjct: 247  HCGNSSRERLIYANFRLVVHVAKQYQGRGLNFPDLLQEGSIGLMRSVEKFKPQVGCRFAT 306

Query: 734  YAYWWIRQSIRKALFQHSRTIRLPENVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGL 555
            YAYWW+RQ+IRKALFQHSRTIRLPENVY LLSKV+EAKK C+QQG H P  EDIAACAG+
Sbjct: 307  YAYWWVRQAIRKALFQHSRTIRLPENVYGLLSKVFEAKKVCIQQGTHNPKIEDIAACAGM 366

Query: 554  SVERLEKLLYTARVPLSMQQPVWMDQNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLS 375
             VERLE LL+TAR+P+SMQQP+WMDQ+TT+QEITAD +IE PE+ A KQ+MRQH RNLL 
Sbjct: 367  KVERLESLLFTARMPISMQQPIWMDQDTTFQEITADPSIETPELSAEKQLMRQHIRNLLG 426

Query: 374  VLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLSSQGLEA 195
            +LN RERKIIRLRFGIE G+Q+SLSEIGA FGL+KERVRQLESRALYKL+QCL SQGL A
Sbjct: 427  ILNTRERKIIRLRFGIEDGKQRSLSEIGAVFGLTKERVRQLESRALYKLRQCLGSQGLAA 486

Query: 194  YADMLI 177
            Y D+L+
Sbjct: 487  YTDILV 492


>emb|CDP06761.1| unnamed protein product [Coffea canephora]
          Length = 556

 Score =  620 bits (1598), Expect = 0.0
 Identities = 330/506 (65%), Positives = 401/506 (79%), Gaps = 6/506 (1%)
 Frame = -2

Query: 1676 TSVLIQDQRNESRPLLCL-KADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVNDFQL 1500
            TS  I +Q  ES P L L K D   Q TLD+R +  AP  S+ +G+   DPD   ++  +
Sbjct: 58   TSTHISEQHEESGPSLRLMKYDRMSQATLDRRLIDAAP--SANQGSDTDDPDHLKSNSHV 115

Query: 1499 QLLRRPELWYLWASLQKEEQSFSSTSVNLMGVEADHVVALAREAFSACKEAASIAKDARL 1320
            +LL+ P LWYL+ SL    QS  S   +   VEA++VVALA+ A SA +EAA +A++++L
Sbjct: 116  KLLQLPGLWYLFQSLDTR-QSVPSIPDDFTDVEAENVVALAKNALSASREAALLAENSKL 174

Query: 1319 FGAHLDD---PSSIRGLASVPV-RRIVRSTRLLERQTK-RRVPKPKIEIQETNHRRKPES 1155
            FGA +DD   PS +  L  +P+ ++ V STRLL+RQ K RRVPKPK+E+++T    +P  
Sbjct: 175  FGASVDDTLSPSLLYALTDIPLEKKTVHSTRLLQRQPKKRRVPKPKVEVEDTRPPVRPNL 234

Query: 1154 HRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRSRLETQFSREP 975
             RK    FD  DPLR+FL GPET +LLT  EESELI KIQ+ MK +EV+SRL++QF+REP
Sbjct: 235  QRK---AFDLIDPLRVFLSGPET-KLLTVDEESELIGKIQDWMKQEEVKSRLQSQFNREP 290

Query: 974  TLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGLSLQDLLQEGS 795
            TLVEWAEAAG SC  LQ+Q+H GN SR+KLIYAN RMVVHIA+QY GRGLSLQDLLQEGS
Sbjct: 291  TLVEWAEAAGLSCRALQTQLHSGNRSREKLIYANHRMVVHIARQYMGRGLSLQDLLQEGS 350

Query: 794  MGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLLSKVYEAKKS 615
            MGLM+S+EKFKPQ GCRFATYAYWWIRQ+IRKA+FQHSRTIRLP+NVY LLSKV EAKK 
Sbjct: 351  MGLMRSIEKFKPQVGCRFATYAYWWIRQAIRKAIFQHSRTIRLPDNVYGLLSKVKEAKKL 410

Query: 614  CVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTYQEITADTTIE 435
            C+QQG H PTKE+IA+CAG++VE+LEKLL+TAR+PLSMQQPVWMDQ+TT+QE+TADT IE
Sbjct: 411  CIQQGIHSPTKEEIASCAGITVEKLEKLLFTARMPLSMQQPVWMDQDTTFQEVTADTAIE 470

Query: 434  VPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGFGLSKERVRQ 255
              ++  SKQ+MR H RNLL +LNP+ERKIIRLRFGIE G+QKSLSEIGA FGLSKERVRQ
Sbjct: 471  ASDLSVSKQLMRIHIRNLLRILNPKERKIIRLRFGIEDGKQKSLSEIGAVFGLSKERVRQ 530

Query: 254  LESRALYKLKQCLSSQGLEAYADMLI 177
            LE+RALYKLKQCL+SQGL AYADML+
Sbjct: 531  LETRALYKLKQCLNSQGLNAYADMLL 556


>ref|XP_023900784.1| RNA polymerase sigma factor sigF, chloroplastic [Quercus suber]
 gb|POE50311.1| rna polymerase sigma factor sigf, chloroplastic [Quercus suber]
          Length = 570

 Score =  619 bits (1597), Expect = 0.0
 Identities = 329/520 (63%), Positives = 403/520 (77%), Gaps = 16/520 (3%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESRPLLCL-KADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVN 1512
            R  PTSVL+Q+Q +E+  LL + K D+  +  LDKRQ  M  G S  E   + + D+ V 
Sbjct: 53   RRSPTSVLLQEQHDENGLLLDMFKEDTAPRAMLDKRQ--MGTGASVHEEKNSGNSDQLVQ 110

Query: 1511 DFQLQLLRRPELWYLWASLQKEEQSFSSTSVNL--------MGVEADHVVALAREAFSAC 1356
            DF+ QLL  P LW+L+ SLQ  + + SS S+          M VE  +VVA+A++A SA 
Sbjct: 111  DFERQLLHWPGLWHLFPSLQTGKNAHSSLSLQPVTTDLEKPMDVEPCNVVAIAKKALSAS 170

Query: 1355 KEAASIAKDARLFGAHLDD-PSS---IRGLASVPVR--RIVRSTRLLERQTK-RRVPKPK 1197
            KEAA +A+D++L GA  DD PSS    R L ++P+   + VRSTRLLER++K RRVPK +
Sbjct: 171  KEAALLAEDSKLIGADFDDSPSSGSGSRSLVNLPLEEEKTVRSTRLLERRSKKRRVPKSE 230

Query: 1196 IEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQ 1017
            + I ET   R  E  RK  EGFDPNDPLR+FLWGPET QLLT  EES+LI ++Q+L+KL+
Sbjct: 231  VMIHETYSTRNVEVKRKIREGFDPNDPLRLFLWGPETKQLLTVDEESKLIAQVQDLLKLE 290

Query: 1016 EVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQ 837
            EV+SRL++ F REPTLVEWAE AG S  VLQS++H  NSSR KLIYAN RMVVHIAKQY 
Sbjct: 291  EVKSRLQSHFGREPTLVEWAEGAGLSYRVLQSKLHSCNSSRQKLIYANLRMVVHIAKQYL 350

Query: 836  GRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPEN 657
            GRGLS QDLLQEGSMGLMKSV KFKPQAGCRF TYAYWWIRQ+IRKA+FQHSRTIRLPEN
Sbjct: 351  GRGLSFQDLLQEGSMGLMKSVVKFKPQAGCRFGTYAYWWIRQTIRKAIFQHSRTIRLPEN 410

Query: 656  VYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQ 477
            V++LL K+ E+K++ +Q+GNH+PTKEDIA   G+++++LEKLLY  R+PLSMQQPVW DQ
Sbjct: 411  VHTLLGKIMESKRALIQEGNHHPTKEDIARHVGMTLDKLEKLLYNTRMPLSMQQPVWADQ 470

Query: 476  NTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSE 297
             TT+QE+TADT IE+P+V  +KQ+MRQH RNLLS L+PRERKIIRLRFGI+  EQKSL+E
Sbjct: 471  KTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLSNLSPRERKIIRLRFGIDNSEQKSLAE 530

Query: 296  IGAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            IG  FGLSKERVRQLESRALY+LKQCLSS+GL AYAD+L+
Sbjct: 531  IGNMFGLSKERVRQLESRALYRLKQCLSSEGLGAYADLLV 570


>ref|XP_019250683.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Nicotiana
            attenuata]
 gb|OIT01336.1| rna polymerase sigma factor sigf, chloroplastic [Nicotiana attenuata]
          Length = 571

 Score =  608 bits (1569), Expect = 0.0
 Identities = 328/520 (63%), Positives = 393/520 (75%), Gaps = 17/520 (3%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESR-PLLCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVN 1512
            R  P SV+  +Q+ E+R  L  +K D T   T+ +R  L+    S+ E N  VD ++ +N
Sbjct: 54   RHVPASVINPEQQFENRLQLHSVKEDKTSLATIGRR--LVEAASSAMEENDAVDSEQNIN 111

Query: 1511 DFQLQLLRRPELWYLWASLQKEE--------QSFSSTSVNLMGVEADHVVALAREAFSAC 1356
              Q+QLLR P L YL++S   +E        +S S     LM  E  +VVALAR+A  A 
Sbjct: 112  ALQVQLLRSPGLSYLFSSYHIKEKGPLTLDTESLSDKGEKLMNFEPHNVVALARKALLAS 171

Query: 1355 KEAASIAKDARLFGAHLDDPSSIRGLASVPV-------RRIVRSTRLLERQTKRR-VPKP 1200
            +EAA +AKD++L G + DD S    L S  +       +RI RSTRLLER++K+R  P  
Sbjct: 172  REAALLAKDSKLLGTNFDD-SIFPNLLSTNLTDDKLKDQRIARSTRLLERRSKKRGAPTS 230

Query: 1199 KIEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKL 1020
            K ++QETN   +P+  R+ NE  D NDPLRMFLWGPET QLLT KEESELIVKIQ  MKL
Sbjct: 231  KHQVQETNRSERPDVRRRVNESIDLNDPLRMFLWGPETRQLLTVKEESELIVKIQNTMKL 290

Query: 1019 QEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQY 840
            QEV+ RL+TQF REPT++EWAEAAG +   LQSQ+  G SSRDKLI AN RMVVHIAKQY
Sbjct: 291  QEVKHRLQTQFDREPTMIEWAEAAGLTSRELQSQLRSGKSSRDKLINANLRMVVHIAKQY 350

Query: 839  QGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPE 660
            QGRGLSLQDLLQEGS+GLMKSVEKFKPQAGCRF TYAYWWIRQ +RKA+FQHSRTIRLPE
Sbjct: 351  QGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQGVRKAIFQHSRTIRLPE 410

Query: 659  NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 480
            NVY+LLSKV +AKK C+QQGNH+PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 411  NVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLLSAARTPLSMQQLVWTD 470

Query: 479  QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 300
            Q+TT+QEITAD  IE PE+  SKQ+MR+H RNLL+VL+P+ERKIIRLRFGI  GE+KSLS
Sbjct: 471  QDTTFQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKIIRLRFGIGDGERKSLS 530

Query: 299  EIGAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADML 180
            EIGA FGLSKERVRQLESRALY+LKQ L+S GL+AY+D+L
Sbjct: 531  EIGAVFGLSKERVRQLESRALYRLKQNLNSHGLDAYSDLL 570


>ref|XP_009794385.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Nicotiana sylvestris]
 ref|XP_016467962.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X1 [Nicotiana tabacum]
          Length = 572

 Score =  608 bits (1568), Expect = 0.0
 Identities = 328/520 (63%), Positives = 392/520 (75%), Gaps = 17/520 (3%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESR-PLLCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVN 1512
            R  P SV+  +Q+ E+R  L  +K + T   T+D+R  L+    S+ E N  VD ++ +N
Sbjct: 55   RHVPASVINPEQQFENRLQLHSVKEEKTSLATIDRR--LVEAASSAMEENDAVDSEQNIN 112

Query: 1511 DFQLQLLRRPELWYLWASLQKEE--------QSFSSTSVNLMGVEADHVVALAREAFSAC 1356
              Q+QLLR P L YL++S   +E        +S S     LM  E  +VVALAR+A  A 
Sbjct: 113  ALQVQLLRSPGLSYLFSSYHLKEKVPLTLDTESLSDKGEKLMNFEPHNVVALARKALLAS 172

Query: 1355 KEAASIAKDARLFGAHLDDPSSIRGLASVPV-------RRIVRSTRLLERQTKRR-VPKP 1200
            +EAA +A+D++L G + DD S    L S  +       +RI RSTRLLER++K+R  P  
Sbjct: 173  REAALLAEDSKLLGTNFDD-SIFPNLLSTNLTDDKLKDQRIARSTRLLERRSKKRGAPTS 231

Query: 1199 KIEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKL 1020
            K ++QETN   +P+  R+ NE  D NDPLRMFLWGPET QLLT KEESELIVKIQ  MKL
Sbjct: 232  KHQVQETNRSERPDVRRRVNESIDLNDPLRMFLWGPETRQLLTVKEESELIVKIQNTMKL 291

Query: 1019 QEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQY 840
            QEV+ RL+TQF REPTL+EWAEAAG +   LQSQ+  G SSRDKLI AN RMVVHIAKQY
Sbjct: 292  QEVKHRLQTQFDREPTLIEWAEAAGLTSRELQSQLRSGKSSRDKLINANLRMVVHIAKQY 351

Query: 839  QGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPE 660
            QGRGLSLQDLLQEGS+GLMKSVEKFKPQAGCRF TYAYWWIRQ +RKA+FQHSRTIRLPE
Sbjct: 352  QGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQGVRKAIFQHSRTIRLPE 411

Query: 659  NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 480
            NVY+LLSKV +AKK C+QQGNH+PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 412  NVYALLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTD 471

Query: 479  QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 300
            Q+ T+QEITAD  IE PE+  SKQ+MR+H RNLL+VL+P+ERKIIRLRFGI  GE+KSLS
Sbjct: 472  QDATFQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKIIRLRFGIGDGERKSLS 531

Query: 299  EIGAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADML 180
            EIGA FGLSKERVRQLESRALY+LKQ LSS GL+AY D+L
Sbjct: 532  EIGAVFGLSKERVRQLESRALYRLKQNLSSHGLDAYNDLL 571


>ref|XP_009794392.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Nicotiana sylvestris]
 ref|XP_016467963.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            isoform X2 [Nicotiana tabacum]
          Length = 545

 Score =  605 bits (1561), Expect = 0.0
 Identities = 326/516 (63%), Positives = 391/516 (75%), Gaps = 17/516 (3%)
 Frame = -2

Query: 1676 TSVLIQDQRNESR-PLLCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVNDFQL 1500
            +SV+  +Q+ E+R  L  +K + T   T+D+R  L+    S+ E N  VD ++ +N  Q+
Sbjct: 32   SSVINPEQQFENRLQLHSVKEEKTSLATIDRR--LVEAASSAMEENDAVDSEQNINALQV 89

Query: 1499 QLLRRPELWYLWASLQKEE--------QSFSSTSVNLMGVEADHVVALAREAFSACKEAA 1344
            QLLR P L YL++S   +E        +S S     LM  E  +VVALAR+A  A +EAA
Sbjct: 90   QLLRSPGLSYLFSSYHLKEKVPLTLDTESLSDKGEKLMNFEPHNVVALARKALLASREAA 149

Query: 1343 SIAKDARLFGAHLDDPSSIRGLASVPV-------RRIVRSTRLLERQTKRR-VPKPKIEI 1188
             +A+D++L G + DD S    L S  +       +RI RSTRLLER++K+R  P  K ++
Sbjct: 150  LLAEDSKLLGTNFDD-SIFPNLLSTNLTDDKLKDQRIARSTRLLERRSKKRGAPTSKHQV 208

Query: 1187 QETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVR 1008
            QETN   +P+  R+ NE  D NDPLRMFLWGPET QLLT KEESELIVKIQ  MKLQEV+
Sbjct: 209  QETNRSERPDVRRRVNESIDLNDPLRMFLWGPETRQLLTVKEESELIVKIQNTMKLQEVK 268

Query: 1007 SRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRG 828
             RL+TQF REPTL+EWAEAAG +   LQSQ+  G SSRDKLI AN RMVVHIAKQYQGRG
Sbjct: 269  HRLQTQFDREPTLIEWAEAAGLTSRELQSQLRSGKSSRDKLINANLRMVVHIAKQYQGRG 328

Query: 827  LSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYS 648
            LSLQDLLQEGS+GLMKSVEKFKPQAGCRF TYAYWWIRQ +RKA+FQHSRTIRLPENVY+
Sbjct: 329  LSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQGVRKAIFQHSRTIRLPENVYA 388

Query: 647  LLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTT 468
            LLSKV +AKK C+QQGNH+PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW DQ+ T
Sbjct: 389  LLSKVKDAKKLCIQQGNHHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTDQDAT 448

Query: 467  YQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGA 288
            +QEITAD  IE PE+  SKQ+MR+H RNLL+VL+P+ERKIIRLRFGI  GE+KSLSEIGA
Sbjct: 449  FQEITADNAIEAPELSVSKQLMRRHVRNLLNVLSPKERKIIRLRFGIGDGERKSLSEIGA 508

Query: 287  GFGLSKERVRQLESRALYKLKQCLSSQGLEAYADML 180
             FGLSKERVRQLESRALY+LKQ LSS GL+AY D+L
Sbjct: 509  VFGLSKERVRQLESRALYRLKQNLSSHGLDAYNDLL 544


>ref|XP_016487689.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Nicotiana tabacum]
          Length = 572

 Score =  605 bits (1561), Expect = 0.0
 Identities = 327/520 (62%), Positives = 393/520 (75%), Gaps = 17/520 (3%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESR-PLLCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVN 1512
            R  P SV+  +Q+ E+R  L  +K + T   T+D+R  L+    S+ E N  VD ++ +N
Sbjct: 55   RHVPASVINPEQQFENRLQLHTVKKEKTSLATIDRR--LVEAASSAMEENDAVDSEQNIN 112

Query: 1511 DFQLQLLRRPELWYLWASLQKEE--------QSFSSTSVNLMGVEADHVVALAREAFSAC 1356
              Q+QLLR P L YL++S   +E        +S S     LM  E + VVALAR+A  A 
Sbjct: 113  VLQVQLLRSPGLSYLFSSYHLKEKRPLTLDTESLSDKGEKLMNFEPESVVALARKALLAS 172

Query: 1355 KEAASIAKDARLFGAHLDDPSSIRGLASVPV-------RRIVRSTRLLERQTKRR-VPKP 1200
            +EAA +A+D++L   + DD S    L S  +       ++ VRSTR LER++KRR VP P
Sbjct: 173  REAALLAEDSKLLETNFDD-SIFPNLLSTNLTDDKLKDQKTVRSTRFLERRSKRRGVPTP 231

Query: 1199 KIEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKL 1020
            K ++QETN   +P+  R+  E  D NDPLRMFLWGPET QLLT KEESELIVKIQ  MKL
Sbjct: 232  KHQVQETNRSERPDVRRRVKESIDLNDPLRMFLWGPETKQLLTVKEESELIVKIQNTMKL 291

Query: 1019 QEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQY 840
            QEV+ RL+TQF REPTL+EWAEAAG +   LQSQ+  G SSRDKLI AN RMVVHIAKQY
Sbjct: 292  QEVKHRLQTQFDREPTLIEWAEAAGLTSRELQSQLRSGKSSRDKLINANLRMVVHIAKQY 351

Query: 839  QGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPE 660
            QGRGLSLQDLLQEGS+GLMKSVEKFKPQAGCRF TYAYWWIRQ +RKA+FQHSRTIRLPE
Sbjct: 352  QGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQGVRKAIFQHSRTIRLPE 411

Query: 659  NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 480
            NVY+LLSKV +AKK C+QQGN +PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 412  NVYALLSKVKDAKKLCIQQGNRHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTD 471

Query: 479  QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 300
            Q+TT+QEITAD+ IE PE+  SKQ+MR+H RNLL+VLNP+ERKIIRLRFGI  G++KSLS
Sbjct: 472  QDTTFQEITADSAIEAPELSVSKQLMRRHIRNLLNVLNPKERKIIRLRFGIGDGKRKSLS 531

Query: 299  EIGAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADML 180
            EIGA FGLSKERVRQLESRALYKLK+ LSS GL+AY+D+L
Sbjct: 532  EIGAVFGLSKERVRQLESRALYKLKKNLSSHGLDAYSDLL 571


>ref|XP_009621232.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Nicotiana
            tomentosiformis]
          Length = 544

 Score =  604 bits (1558), Expect = 0.0
 Identities = 326/520 (62%), Positives = 392/520 (75%), Gaps = 17/520 (3%)
 Frame = -2

Query: 1688 RPPPTSVLIQDQRNESR-PLLCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVN 1512
            R  P SV+  +Q+ E+R  L  +K + T   T+D+R  L+    S+ E N  VD ++ +N
Sbjct: 27   RHVPASVINPEQQFENRLQLHTVKEEKTSLATIDRR--LVEAASSAMEENDAVDSEQNIN 84

Query: 1511 DFQLQLLRRPELWYLWASLQKEE--------QSFSSTSVNLMGVEADHVVALAREAFSAC 1356
              Q+QLLR P L YL++S   +E        +S S     LM  E + VVALAR+A  A 
Sbjct: 85   ALQVQLLRSPGLSYLFSSYHLKEKGPLTLDTESLSDKGEKLMNFEPESVVALARKALLAS 144

Query: 1355 KEAASIAKDARLFGAHLDDPSSIRGLASVPV-------RRIVRSTRLLERQTKRR-VPKP 1200
            +EAA +A+D++L   + DD S    L S  +       ++ VRSTR LER++KRR VP P
Sbjct: 145  REAALLAEDSKLLETNFDD-SIFPNLLSTNLTDDKLKDQKTVRSTRFLERRSKRRGVPTP 203

Query: 1199 KIEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKL 1020
            K ++QETN   +P+  R+  E  D NDPLRMFLWGPET QLLT KEESELIVKIQ  MKL
Sbjct: 204  KHQVQETNRSERPDVRRRVKESIDLNDPLRMFLWGPETKQLLTVKEESELIVKIQNTMKL 263

Query: 1019 QEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQY 840
            QEV+ RL+TQF REPTL+EWAEAAG +   LQSQ+  G SSRDKLI AN RMVVHIAKQY
Sbjct: 264  QEVKHRLQTQFDREPTLIEWAEAAGLTSRELQSQLRSGKSSRDKLINANLRMVVHIAKQY 323

Query: 839  QGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPE 660
            QGRGLSLQDLLQEGS+GLMKSVEKFKPQAGCRF TYAYWWIRQ +RK +FQHSRTIRLPE
Sbjct: 324  QGRGLSLQDLLQEGSVGLMKSVEKFKPQAGCRFPTYAYWWIRQGVRKTIFQHSRTIRLPE 383

Query: 659  NVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMD 480
            NVY+LLSKV +AKK C+QQGN +PT+EDIA+CAG+SVERL+ LL  AR PLSMQQ VW D
Sbjct: 384  NVYALLSKVKDAKKLCIQQGNRHPTREDIASCAGMSVERLQSLLSAARTPLSMQQSVWTD 443

Query: 479  QNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLS 300
            Q+TT+QEITAD+ IE PE+  SKQ+MR+H RNLL+VLNP+ERKIIRLRFGI  G++KSLS
Sbjct: 444  QDTTFQEITADSAIEAPELSVSKQLMRRHIRNLLNVLNPKERKIIRLRFGIGDGKRKSLS 503

Query: 299  EIGAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADML 180
            EIGA FGLSKERVRQLESRALYKLK+ LSS GL+AY+D+L
Sbjct: 504  EIGAVFGLSKERVRQLESRALYKLKKNLSSHGLDAYSDLL 543


>gb|AKC88770.1| sigma factor [Francoa sonchifolia]
          Length = 549

 Score =  604 bits (1558), Expect = 0.0
 Identities = 327/522 (62%), Positives = 398/522 (76%), Gaps = 21/522 (4%)
 Frame = -2

Query: 1679 PTSVLIQDQRNESRPLLC--LKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVNDF 1506
            PTSVL+++QR E R +LC  LK + T + TLD RQ+L   G    E + N   D+ V DF
Sbjct: 38   PTSVLLREQREEYR-VLCHILKEERTSEATLDMRQMLN--GAVQEEISDN--SDQLVQDF 92

Query: 1505 QLQLLRRPELWYLWASLQKEEQSFSSTSVNLM----------GVEADHVVALAREAFSAC 1356
            + +LL+ P LW ++ SLQ      SS ++  +          G E+    ALA ++ SA 
Sbjct: 93   ERRLLQWPGLWPIFPSLQTGGSPSSSLAMQPVTPTTDGEKSAGTESCLAAALAMKSLSAS 152

Query: 1355 KEAASIAKDARLFGAHLD-------DPSSIRGLASVPVR--RIVRSTRLLERQTKRRVPK 1203
            K+AA +  +++L   + D       DP+S   L SVP+   RIVRSTRLLER++K+RVPK
Sbjct: 153  KQAAPLLNESKLARVNGDGLPAPSLDPAS---LVSVPLDKVRIVRSTRLLERRSKKRVPK 209

Query: 1202 PKIEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMK 1023
              + + ET H R+ +  RK +EGFDPNDPLRMFLWGPET QLLTAKEE ELI  IQ++MK
Sbjct: 210  --VGVHETFHSRRTDIKRKSSEGFDPNDPLRMFLWGPETKQLLTAKEEFELIDHIQDMMK 267

Query: 1022 LQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQ 843
            L+EV+SRL +QF  EPTL+EWAEAAG SC VLQSQ+   N SR+KLI AN RMVVHIAKQ
Sbjct: 268  LEEVKSRLLSQFGHEPTLIEWAEAAGISCRVLQSQLRTANKSREKLINANLRMVVHIAKQ 327

Query: 842  YQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLP 663
            Y G+GLS  DLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRTIRLP
Sbjct: 328  YLGKGLSFPDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLP 387

Query: 662  ENVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWM 483
            ENVY+LL KV EAKKSC+Q+GNH PTKE++A   G++VE+LEKLLYT R+PLSMQQPVW 
Sbjct: 388  ENVYTLLGKVLEAKKSCIQEGNHRPTKEELARRVGITVEKLEKLLYTTRMPLSMQQPVWA 447

Query: 482  DQNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSL 303
             Q+TT+QEI ADT IE+P++   KQ+MRQH RNLLS+L+P+ER+IIRLRFGIE G+QKSL
Sbjct: 448  GQDTTFQEIIADTEIEIPDISVGKQMMRQHVRNLLSILSPKERRIIRLRFGIEDGKQKSL 507

Query: 302  SEIGAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            SEIGA FGLSKERVRQLESRALY+LKQCLSSQGL AY D+L+
Sbjct: 508  SEIGAVFGLSKERVRQLESRALYRLKQCLSSQGLGAYTDLLV 549


>ref|XP_019077288.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X2
            [Vitis vinifera]
          Length = 566

 Score =  603 bits (1556), Expect = 0.0
 Identities = 315/515 (61%), Positives = 397/515 (77%), Gaps = 14/515 (2%)
 Frame = -2

Query: 1679 PTSVLIQDQRNESRPL-LCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVNDFQ 1503
            PTSVL+Q+QR+E RP    LK + T+Q TL+KRQ+ +   +S+ E N + D ++Y+ +F+
Sbjct: 56   PTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIV--VSADEENSD-DHNQYMVNFE 112

Query: 1502 LQLLRRPELWYLWASLQKEEQSFSSTSV---------NLMGVEADHVVALAREAFSACKE 1350
             QLL +P LWY   S Q  E+S  S+S+         N M V+   V+ALA++A SA K+
Sbjct: 113  RQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQ 172

Query: 1349 AASIAKDARLFGAHLDDPSSIRGLASVP----VRRIVRSTRLLERQTKRRVPKPKIEIQE 1182
            A S+ ++A+L GA L+D  S  G  S P      + VRSTRLLER++K+R   PK+ + E
Sbjct: 173  AVSLYENAKLLGADLEDSPSSLGAISSPNLPLEEKTVRSTRLLERRSKKR-RNPKVAVHE 231

Query: 1181 TNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRSR 1002
             +  R+ E  RK NEG+DP DPLR+FLWGPET +LLTAKEESELIV+IQELM+L+EV+ R
Sbjct: 232  NHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKKR 291

Query: 1001 LETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGLS 822
            L++   REPT+VEWAEA G SC VLQSQ+H GN SR KLIYAN RMVVHIAKQYQGRGL+
Sbjct: 292  LQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGLN 351

Query: 821  LQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSLL 642
            LQDLLQEGSMGLM SVEKFKP AGCRFA+YAYWWIRQ++RKA+FQHSRTIRLPEN+YSLL
Sbjct: 352  LQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLL 411

Query: 641  SKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTYQ 462
             KV EAK+  +Q+G+H PTKE+IA   G+++E+L++LL   R+PLSMQQPVW DQ+TT+Q
Sbjct: 412  GKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQ 471

Query: 461  EITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAGF 282
            E+TADT IE+P+V  +KQ+MRQH RNLL VL P+ER+IIRLRFGI  G  ++LSEIG  F
Sbjct: 472  EVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIGLVF 531

Query: 281  GLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            G SKERVRQLE RAL+KLKQCLSS GLE+Y D+L+
Sbjct: 532  GFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 566


>emb|CBI32760.3| unnamed protein product, partial [Vitis vinifera]
          Length = 561

 Score =  602 bits (1552), Expect = 0.0
 Identities = 316/516 (61%), Positives = 398/516 (77%), Gaps = 15/516 (2%)
 Frame = -2

Query: 1679 PTSVLIQDQRNESRPL-LCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVNDFQ 1503
            PTSVL+Q+QR+E RP    LK + T+Q TL+KRQ+ +   +S+ E N + D ++Y+ +F+
Sbjct: 50   PTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIV--VSADEENSD-DHNQYMVNFE 106

Query: 1502 LQLLRRPELWYLWASLQKEEQSFSSTSV---------NLMGVEADHVVALAREAFSACKE 1350
             QLL +P LWY   S Q  E+S  S+S+         N M V+   V+ALA++A SA K+
Sbjct: 107  RQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQ 166

Query: 1349 AASIAKDARLFGAHLDD-PSSIRGLASVP----VRRIVRSTRLLERQTKRRVPKPKIEIQ 1185
            A S+ ++A+L GA L+D PS   G  S P      + VRSTRLLER++K+R   PK+ + 
Sbjct: 167  AVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKR-RNPKVAVH 225

Query: 1184 ETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRS 1005
            E +  R+ E  RK NEG+DP DPLR+FLWGPET +LLTAKEESELIV+IQELM+L+EV+ 
Sbjct: 226  ENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKK 285

Query: 1004 RLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGL 825
            RL++   REPT+VEWAEA G SC VLQSQ+H GN SR KLIYAN RMVVHIAKQYQGRGL
Sbjct: 286  RLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGL 345

Query: 824  SLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSL 645
            +LQDLLQEGSMGLM SVEKFKP AGCRFA+YAYWWIRQ++RKA+FQHSRTIRLPEN+YSL
Sbjct: 346  NLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSL 405

Query: 644  LSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTY 465
            L KV EAK+  +Q+G+H PTKE+IA   G+++E+L++LL   R+PLSMQQPVW DQ+TT+
Sbjct: 406  LGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTF 465

Query: 464  QEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAG 285
            QE+TADT IE+P+V  +KQ+MRQH RNLL VL P+ER+IIRLRFGI  G  ++LSEIG  
Sbjct: 466  QEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIGLV 525

Query: 284  FGLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            FG SKERVRQLE RAL+KLKQCLSS GLE+Y D+L+
Sbjct: 526  FGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 561


>ref|XP_010653602.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1
            [Vitis vinifera]
          Length = 567

 Score =  602 bits (1552), Expect = 0.0
 Identities = 316/516 (61%), Positives = 398/516 (77%), Gaps = 15/516 (2%)
 Frame = -2

Query: 1679 PTSVLIQDQRNESRPL-LCLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEYVNDFQ 1503
            PTSVL+Q+QR+E RP    LK + T+Q TL+KRQ+ +   +S+ E N + D ++Y+ +F+
Sbjct: 56   PTSVLLQEQRDEYRPFPQALKDERTFQATLEKRQMEIV--VSADEENSD-DHNQYMVNFE 112

Query: 1502 LQLLRRPELWYLWASLQKEEQSFSSTSV---------NLMGVEADHVVALAREAFSACKE 1350
             QLL +P LWY   S Q  E+S  S+S+         N M V+   V+ALA++A SA K+
Sbjct: 113  RQLLLQPGLWYSLPSSQTGEKSPFSSSIMKSITTDIENSMDVKPCDVLALAKKALSASKQ 172

Query: 1349 AASIAKDARLFGAHLDD-PSSIRGLASVP----VRRIVRSTRLLERQTKRRVPKPKIEIQ 1185
            A S+ ++A+L GA L+D PS   G  S P      + VRSTRLLER++K+R   PK+ + 
Sbjct: 173  AVSLYENAKLLGADLEDSPSPSLGAISSPNLPLEEKTVRSTRLLERRSKKR-RNPKVAVH 231

Query: 1184 ETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQEVRS 1005
            E +  R+ E  RK NEG+DP DPLR+FLWGPET +LLTAKEESELIV+IQELM+L+EV+ 
Sbjct: 232  ENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETRKLLTAKEESELIVQIQELMRLEEVKK 291

Query: 1004 RLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQGRGL 825
            RL++   REPT+VEWAEA G SC VLQSQ+H GN SR KLIYAN RMVVHIAKQYQGRGL
Sbjct: 292  RLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGNRSRQKLIYANLRMVVHIAKQYQGRGL 351

Query: 824  SLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENVYSL 645
            +LQDLLQEGSMGLM SVEKFKP AGCRFA+YAYWWIRQ++RKA+FQHSRTIRLPEN+YSL
Sbjct: 352  NLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSL 411

Query: 644  LSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQNTTY 465
            L KV EAK+  +Q+G+H PTKE+IA   G+++E+L++LL   R+PLSMQQPVW DQ+TT+
Sbjct: 412  LGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTF 471

Query: 464  QEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEIGAG 285
            QE+TADT IE+P+V  +KQ+MRQH RNLL VL P+ER+IIRLRFGI  G  ++LSEIG  
Sbjct: 472  QEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGIPRTLSEIGLV 531

Query: 284  FGLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            FG SKERVRQLE RAL+KLKQCLSS GLE+Y D+L+
Sbjct: 532  FGFSKERVRQLEQRALHKLKQCLSSHGLESYTDLLV 567


>ref|XP_021827463.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Prunus
            avium]
          Length = 539

 Score =  593 bits (1530), Expect = 0.0
 Identities = 317/523 (60%), Positives = 401/523 (76%), Gaps = 22/523 (4%)
 Frame = -2

Query: 1679 PTSVLIQDQRNESRPLL-CLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEY---VN 1512
            PTSVL+Q+QR+E +PLL  LK D T + TLD+ Q+    G S  E   ++D D++   VN
Sbjct: 23   PTSVLLQEQRDEFKPLLHVLKEDKTSEATLDRMQI--ETGASVHE---DLDIDDFYPLVN 77

Query: 1511 DFQLQLLRRPELWYLWASLQKEE--------QSFSSTSVNLMGVEADHVVALAREAFSAC 1356
              + QLL  P++  +++SLQ           +S ++ S   M VE  +VVALA++A SA 
Sbjct: 78   GSKPQLLN-PDILDVFSSLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSAS 136

Query: 1355 KEAASIAKDARLFGAHLDDPSSI----RGLAS--VPVRRIVRSTRLLERQTKR----RVP 1206
            +EAAS+A+D++  GA  D+  S+      LA+  V     VRSTR+LER+ KR    +VP
Sbjct: 137  REAASLAEDSQSMGADFDESLSLGLGYTSLANWIVEEETTVRSTRILERRRKRIKTRKVP 196

Query: 1205 KPKIEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELM 1026
            K K+   E+N     +  +K +EGF+PNDPLR+FLWGPET QLLTAKEE+ELI ++Q+L 
Sbjct: 197  KSKVIGHESNSFTSSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLF 256

Query: 1025 KLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAK 846
            KL+EV++RL+TQF REPTL+EWAEA G SC +L+SQ+  G SSR+KLIYAN RMVVHIAK
Sbjct: 257  KLEEVKTRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAK 316

Query: 845  QYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRL 666
            QYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRTIRL
Sbjct: 317  QYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRL 376

Query: 665  PENVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVW 486
            PENVYSLL KV EAKKSC+Q+GNH P+KE++A   G++VE+LEKLLY  R+PLSMQQPVW
Sbjct: 377  PENVYSLLGKVLEAKKSCIQEGNHNPSKEELARRVGITVEKLEKLLYATRMPLSMQQPVW 436

Query: 485  MDQNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKS 306
             DQ+TT+QE+TADT +E+P+V  +KQ+MRQH R+LLS+LN RER+IIRLR+GIE G+Q+S
Sbjct: 437  ADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLRERQIIRLRYGIEDGKQRS 496

Query: 305  LSEIGAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            LSEIG  FGLSKERVRQLESRA  KL+Q L SQGL AY  +L+
Sbjct: 497  LSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 539


>ref|XP_020422239.1| RNA polymerase sigma factor sigF, chloroplastic isoform X2 [Prunus
            persica]
 gb|ONI03022.1| hypothetical protein PRUPE_6G234100 [Prunus persica]
          Length = 568

 Score =  594 bits (1532), Expect = 0.0
 Identities = 317/519 (61%), Positives = 400/519 (77%), Gaps = 18/519 (3%)
 Frame = -2

Query: 1679 PTSVLIQDQRNESRPLL-CLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEY---VN 1512
            PTSVL+Q+QR+E +PLL  LK D T +  LD+ Q+    G S  E   ++D D++   VN
Sbjct: 57   PTSVLLQEQRDEFKPLLHVLKEDKTSEAALDRMQI--ETGASVHE---DLDIDDFYPLVN 111

Query: 1511 DFQLQLLRRPELWYLWASLQKEE--------QSFSSTSVNLMGVEADHVVALAREAFSAC 1356
              + QLL   ++  +++SLQ           +S ++ S   M VE  +VVALA++A SA 
Sbjct: 112  SSKPQLLNH-DILDVFSSLQTGAKPSTPLTLESLTTASNKHMDVEPCNVVALAKKALSAS 170

Query: 1355 KEAASIAKDARLFGAHLDDPSSIRGLAS--VPVRRIVRSTRLLERQTKR----RVPKPKI 1194
            +EAAS+A+D++  GA  D+  S+ GLA+  V   + VRSTR+LER+ KR    +VPK K+
Sbjct: 171  REAASLAEDSQSMGADFDESLSL-GLANWIVEEEKTVRSTRILERRRKRIKTRKVPKSKV 229

Query: 1193 EIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELMKLQE 1014
               E+N     +  +K +EGF+PNDPLR+FLWGPET QLLTAKEE+ELI ++Q+L KL+E
Sbjct: 230  IGHESNSFTGSDVRKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLFKLEE 289

Query: 1013 VRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAKQYQG 834
            V+SRL+TQF REPTL+EWAEA G SC +L+SQ+  G SSR+KLIYAN RMVVHIAKQYQG
Sbjct: 290  VKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAKQYQG 349

Query: 833  RGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRLPENV 654
            RGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRTIRLPENV
Sbjct: 350  RGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRLPENV 409

Query: 653  YSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVWMDQN 474
            YSLL KV EAKKSC+Q+GNH P KE++A   G++VE+LEKLLY  R+PLSMQQPVW DQ+
Sbjct: 410  YSLLGKVLEAKKSCIQEGNHNPNKEELARRVGITVEKLEKLLYATRMPLSMQQPVWADQD 469

Query: 473  TTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKSLSEI 294
            TT+QE+TADT +E+P+V  +KQ+MRQH R+LLS+LN RER+IIRLR+GIE G+Q+SLSEI
Sbjct: 470  TTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLREREIIRLRYGIEDGKQRSLSEI 529

Query: 293  GAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            G  FGLSKERVRQLESRA  KL+Q L SQGL AY  +L+
Sbjct: 530  GGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 568


>ref|XP_008243975.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic [Prunus
            mume]
          Length = 573

 Score =  594 bits (1531), Expect = 0.0
 Identities = 318/523 (60%), Positives = 400/523 (76%), Gaps = 22/523 (4%)
 Frame = -2

Query: 1679 PTSVLIQDQRNESRPLL-CLKADSTYQQTLDKRQLLMAPGLSSREGNKNVDPDEY---VN 1512
            PTSVL+Q+QR+E +PLL  LK D T + TLD+ Q+    G S  E   ++D D++   VN
Sbjct: 57   PTSVLLQEQRDEFKPLLHVLKEDKTSEATLDRMQI--ETGASVHE---DLDIDDFYPLVN 111

Query: 1511 DFQLQLLRRPELWYLWASLQKEE--------QSFSSTSVNLMGVEADHVVALAREAFSAC 1356
              + QLL  P++  +++SLQ           +S ++ S   M VE  +VVALA++A SA 
Sbjct: 112  GSKPQLLN-PDILDVFSSLQTGAKPSTPVTLESLTTASNKHMDVEPCNVVALAKKALSAS 170

Query: 1355 KEAASIAKDARLFGAHLDDPSSIR-GLAS-----VPVRRIVRSTRLLERQTKR----RVP 1206
            +EAAS+A+D++  GA  D+  S+  G  S     V   + VRSTR+LER+ KR    +VP
Sbjct: 171  REAASLAEDSQSMGADFDESLSLGLGYTSLDNWIVEEEKTVRSTRILERRRKRIKTRKVP 230

Query: 1205 KPKIEIQETNHRRKPESHRKFNEGFDPNDPLRMFLWGPETTQLLTAKEESELIVKIQELM 1026
            K K+   E+N     +  +K +EGF+PNDPLR+FLWGPET QLLTAKEE+ELI ++Q+L 
Sbjct: 231  KSKLIGHESNSFTSSDVPKKISEGFNPNDPLRLFLWGPETRQLLTAKEEAELIARVQDLF 290

Query: 1025 KLQEVRSRLETQFSREPTLVEWAEAAGTSCHVLQSQVHCGNSSRDKLIYANFRMVVHIAK 846
            KL+EV+SRL+TQF REPTL+EWAEA G SC +L+SQ+  G SSR+KLIYAN RMVVHIAK
Sbjct: 291  KLEEVKSRLQTQFGREPTLIEWAEAVGISCQILKSQLRSGTSSREKLIYANLRMVVHIAK 350

Query: 845  QYQGRGLSLQDLLQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQSIRKALFQHSRTIRL 666
            QYQGRGL LQDL+QEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQ++RKA+FQHSRTIRL
Sbjct: 351  QYQGRGLGLQDLMQEGSMGLMKSVEKFKPQAGCRFATYAYWWIRQTVRKAIFQHSRTIRL 410

Query: 665  PENVYSLLSKVYEAKKSCVQQGNHYPTKEDIAACAGLSVERLEKLLYTARVPLSMQQPVW 486
            PENVYSLL KV EAKKSC+Q+GNH P KE++A   G++VE+LEKLLY  R+PLSMQQPVW
Sbjct: 411  PENVYSLLGKVLEAKKSCIQEGNHNPNKEELAIRVGITVEKLEKLLYATRMPLSMQQPVW 470

Query: 485  MDQNTTYQEITADTTIEVPEVGASKQIMRQHTRNLLSVLNPRERKIIRLRFGIEGGEQKS 306
             DQ+TT+QE+TADT +E+P+V  +KQ+MRQH R+LLS+LN RER+IIRLR+GIE G+Q+S
Sbjct: 471  ADQDTTFQEVTADTGVEIPDVSVAKQLMRQHVRHLLSILNLRERQIIRLRYGIEDGKQRS 530

Query: 305  LSEIGAGFGLSKERVRQLESRALYKLKQCLSSQGLEAYADMLI 177
            LSEIG  FGLSKERVRQLESRA  KL+Q L SQGL AY  +L+
Sbjct: 531  LSEIGGMFGLSKERVRQLESRAFLKLRQSLGSQGLGAYGPLLV 573