BLASTX nr result

ID: Rehmannia32_contig00015261 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00015261
         (438 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011083805.1| pentatricopeptide repeat-containing protein ...    93   4e-19
gb|PIN12816.1| hypothetical protein CDL12_14579 [Handroanthus im...    87   6e-17
gb|KZV40941.1| aluminum-activated malate transporter 4-like [Dor...    55   7e-06

>ref|XP_011083805.1| pentatricopeptide repeat-containing protein At5g16860 [Sesamum
           indicum]
 ref|XP_011083807.1| pentatricopeptide repeat-containing protein At5g16860 [Sesamum
           indicum]
 ref|XP_011083808.1| pentatricopeptide repeat-containing protein At5g16860 [Sesamum
           indicum]
          Length = 856

 Score = 92.8 bits (229), Expect = 4e-19
 Identities = 54/103 (52%), Positives = 61/103 (59%), Gaps = 3/103 (2%)
 Frame = -3

Query: 301 MLLSSICRPKCRHRRSNLRRLVLKLCFSSSTAQQCYFLPEDEPIQHQHVIP---FDSDPN 131
           MLL +   PK RH  + LR L+LKL FSSS AQQC  L E E I  +HVIP   F SDP 
Sbjct: 1   MLLPTTFPPKYRHCCTTLRPLLLKLYFSSSAAQQCLSLAEPELIHQEHVIPGVTFPSDPE 60

Query: 130 TTGSALSNFLSSDRHSDAXXXXXXXXXXXXXLFYWNNLIKWSV 2
           TT   LSN+LSS RHSD              +FYWN+LIK SV
Sbjct: 61  TTAQVLSNYLSSGRHSDTLSLLRRIPPSRSNVFYWNSLIKRSV 103


>gb|PIN12816.1| hypothetical protein CDL12_14579 [Handroanthus impetiginosus]
          Length = 848

 Score = 86.7 bits (213), Expect = 6e-17
 Identities = 52/101 (51%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = -3

Query: 301 MLLSSICRPKCRHRRS-NLRRLVLKLCFSSSTAQQCYFLPEDEPIQHQHVIPFDSDPNTT 125
           MLLSS   PK RHRR+  LR L L+L FSSS AQ+CY L E +      +  FDSDP++T
Sbjct: 1   MLLSSTFPPKYRHRRAATLRPLFLRLFFSSSAAQKCYSLLETD------LPSFDSDPHST 54

Query: 124 GSALSNFLSSDRHSDAXXXXXXXXXXXXXLFYWNNLIKWSV 2
             ALSN +SSDRHSDA             +FYWN+LIK S+
Sbjct: 55  ARALSNCISSDRHSDALSLLRRMPPSRSAVFYWNSLIKRSI 95


>gb|KZV40941.1| aluminum-activated malate transporter 4-like [Dorcoceras
           hygrometricum]
          Length = 1103

 Score = 55.1 bits (131), Expect = 7e-06
 Identities = 38/101 (37%), Positives = 51/101 (50%), Gaps = 4/101 (3%)
 Frame = -3

Query: 301 MLLSSICRPKC-RHRRSNLRRLVLKLCFSSSTAQQCYFLPEDEPIQHQHVIP---FDSDP 134
           MLLSS   PK  RH  + LR L+ +  FSS T Q    L E + +  QH+I      S+P
Sbjct: 1   MLLSSSLPPKPNRHACAALRCLIYRFRFSSCTQQPRDSLTETKLVHQQHLIRGLHLHSNP 60

Query: 133 NTTGSALSNFLSSDRHSDAXXXXXXXXXXXXXLFYWNNLIK 11
           + T   LSN+LS + HSD              +F+WN LI+
Sbjct: 61  DVTFRILSNYLSHNAHSDVLSVLRNISPTRSEVFFWNGLIR 101


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