BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00014357
         (1257 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN17604.1| 23S rRNA pseudouridine(955/2504/2580) synthase [H...   369   e-121
ref|XP_020552922.1| RNA pseudouridine synthase 4, mitochondrial ...   348   e-115
ref|XP_020552921.1| RNA pseudouridine synthase 4, mitochondrial ...   348   e-113
ref|XP_011092538.1| RNA pseudouridine synthase 4, mitochondrial ...   348   e-113
ref|XP_012831077.1| PREDICTED: RNA pseudouridine synthase 4, mit...   344   e-113
ref|XP_012831076.1| PREDICTED: RNA pseudouridine synthase 4, mit...   344   e-112
gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythra...   344   e-111
ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mit...   344   e-111
ref|XP_010647894.1| PREDICTED: RNA pseudouridine synthase 4, mit...   322   e-103
ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mit...   322   e-102
ref|XP_022896844.1| RNA pseudouridine synthase 4, mitochondrial ...   315   e-100
ref|XP_017230138.1| PREDICTED: RNA pseudouridine synthase 4, mit...   310   4e-98
ref|XP_018827854.1| PREDICTED: RNA pseudouridine synthase 4, mit...   307   6e-98
ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mit...   307   8e-97
ref|XP_019225818.1| PREDICTED: RNA pseudouridine synthase 4, mit...   304   9e-96
ref|XP_019166408.1| PREDICTED: RNA pseudouridine synthase 4, mit...   304   1e-95
ref|XP_016460522.1| PREDICTED: RNA pseudouridine synthase 4, mit...   300   1e-95
ref|XP_022028067.1| RNA pseudouridine synthase 4, mitochondrial ...   303   2e-95
gb|KZV33213.1| RNA pseudouridine synthase 4, mitochondrial-like ...   303   3e-95
ref|XP_023924555.1| RNA pseudouridine synthase 4, mitochondrial ...   303   7e-95

>gb|PIN17604.1| 23S rRNA pseudouridine(955/2504/2580) synthase [Handroanthus
           impetiginosus]
          Length = 462

 Score =  369 bits (946), Expect = e-121
 Identities = 187/235 (79%), Positives = 204/235 (86%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGS RILQK+Y+ALVIGSPRR +GLI+ 
Sbjct: 228 SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSKRILQKRYWALVIGSPRRHQGLITA 287

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL+KVVVDNGKSERITVVDNNHT+S QH+ TEYRVI+SS  GYT LELSPLTGRKHQLRV
Sbjct: 288 PLVKVVVDNGKSERITVVDNNHTVSAQHAVTEYRVIASSSCGYTLLELSPLTGRKHQLRV 347

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHKKLG   +S SDL+ D+KM K KH  IGL+LENGSISDK
Sbjct: 348 HCAEVLGTPIVGDYKYGWQAHKKLGHQMDSTSDLRPDNKMFKVKHETIGLDLENGSISDK 407

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
              LHLHCK+MILPNIS+ALQ    ISD    +MESI++DAPL  HMQRS DLLN
Sbjct: 408 HFSLHLHCKRMILPNISMALQHSNRISDLDAVRMESIKLDAPLAPHMQRSLDLLN 462


>ref|XP_020552922.1| RNA pseudouridine synthase 4, mitochondrial isoform X3 [Sesamum
           indicum]
          Length = 328

 Score =  348 bits (893), Expect = e-115
 Identities = 177/235 (75%), Positives = 199/235 (84%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQL+ TILHSIFREKTFGAS+DVP S +ILQK+Y+ALVIGSPRRREGLISV
Sbjct: 94  SSGILVMGRTQLTATILHSIFREKTFGASDDVPDSKKILQKRYWALVIGSPRRREGLISV 153

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVV+DNGKSERITVVD   T+S QH+ TEYRVI+SSP GYTWLEL PLTGRKHQLRV
Sbjct: 154 PLGKVVIDNGKSERITVVDTTKTVSAQHAVTEYRVIASSPCGYTWLELLPLTGRKHQLRV 213

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHK+LG     ASDL+  +K+++ +H+ +G + E GSISDK
Sbjct: 214 HCAEVLGTPIVGDYKYGWQAHKRLGSRLVYASDLRWHNKISEVQHDTVGFDSEIGSISDK 273

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           Q  LHLHCK+MILPNISLALQ    ISD      ESI++ APLPAHMQRSWDLLN
Sbjct: 274 QLRLHLHCKEMILPNISLALQHRNGISDLDTAATESIKLVAPLPAHMQRSWDLLN 328


>ref|XP_020552921.1| RNA pseudouridine synthase 4, mitochondrial isoform X2 [Sesamum
           indicum]
          Length = 431

 Score =  348 bits (893), Expect = e-113
 Identities = 177/235 (75%), Positives = 199/235 (84%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQL+ TILHSIFREKTFGAS+DVP S +ILQK+Y+ALVIGSPRRREGLISV
Sbjct: 197 SSGILVMGRTQLTATILHSIFREKTFGASDDVPDSKKILQKRYWALVIGSPRRREGLISV 256

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVV+DNGKSERITVVD   T+S QH+ TEYRVI+SSP GYTWLEL PLTGRKHQLRV
Sbjct: 257 PLGKVVIDNGKSERITVVDTTKTVSAQHAVTEYRVIASSPCGYTWLELLPLTGRKHQLRV 316

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHK+LG     ASDL+  +K+++ +H+ +G + E GSISDK
Sbjct: 317 HCAEVLGTPIVGDYKYGWQAHKRLGSRLVYASDLRWHNKISEVQHDTVGFDSEIGSISDK 376

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           Q  LHLHCK+MILPNISLALQ    ISD      ESI++ APLPAHMQRSWDLLN
Sbjct: 377 QLRLHLHCKEMILPNISLALQHRNGISDLDTAATESIKLVAPLPAHMQRSWDLLN 431


>ref|XP_011092538.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Sesamum
           indicum]
          Length = 454

 Score =  348 bits (893), Expect = e-113
 Identities = 177/235 (75%), Positives = 199/235 (84%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQL+ TILHSIFREKTFGAS+DVP S +ILQK+Y+ALVIGSPRRREGLISV
Sbjct: 220 SSGILVMGRTQLTATILHSIFREKTFGASDDVPDSKKILQKRYWALVIGSPRRREGLISV 279

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVV+DNGKSERITVVD   T+S QH+ TEYRVI+SSP GYTWLEL PLTGRKHQLRV
Sbjct: 280 PLGKVVIDNGKSERITVVDTTKTVSAQHAVTEYRVIASSPCGYTWLELLPLTGRKHQLRV 339

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHK+LG     ASDL+  +K+++ +H+ +G + E GSISDK
Sbjct: 340 HCAEVLGTPIVGDYKYGWQAHKRLGSRLVYASDLRWHNKISEVQHDTVGFDSEIGSISDK 399

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           Q  LHLHCK+MILPNISLALQ    ISD      ESI++ APLPAHMQRSWDLLN
Sbjct: 400 QLRLHLHCKEMILPNISLALQHRNGISDLDTAATESIKLVAPLPAHMQRSWDLLN 454


>ref|XP_012831077.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X3
           [Erythranthe guttata]
          Length = 364

 Score =  344 bits (882), Expect = e-113
 Identities = 174/235 (74%), Positives = 203/235 (86%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQLSTTILHS+FREKTFGASN+V G+ +ILQKKY+ALVIGSPRRREGLISV
Sbjct: 130 SSGILVMGRTQLSTTILHSVFREKTFGASNNVCGNKKILQKKYWALVIGSPRRREGLISV 189

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL+KVV+DNGKSERITV +NN+TLS QH+ TEYRVI+SS  GY+WLELSPLTGRKHQLRV
Sbjct: 190 PLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSWLELSPLTGRKHQLRV 249

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHKKLG + +S SD K  D+++K K++   LELE+GSISDK
Sbjct: 250 HCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKNDTFALELESGSISDK 309

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           Q  LHLHCK+M LP+I+ AL+   I SD    +M+SI ++A LPAHMQRSW LL+
Sbjct: 310 QFRLHLHCKEMSLPDITQALKYASINSDLDTAEMKSITLEACLPAHMQRSWSLLS 364


>ref|XP_012831076.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Erythranthe guttata]
          Length = 372

 Score =  344 bits (882), Expect = e-112
 Identities = 174/235 (74%), Positives = 203/235 (86%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQLSTTILHS+FREKTFGASN+V G+ +ILQKKY+ALVIGSPRRREGLISV
Sbjct: 138 SSGILVMGRTQLSTTILHSVFREKTFGASNNVCGNKKILQKKYWALVIGSPRRREGLISV 197

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL+KVV+DNGKSERITV +NN+TLS QH+ TEYRVI+SS  GY+WLELSPLTGRKHQLRV
Sbjct: 198 PLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSWLELSPLTGRKHQLRV 257

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHKKLG + +S SD K  D+++K K++   LELE+GSISDK
Sbjct: 258 HCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKNDTFALELESGSISDK 317

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           Q  LHLHCK+M LP+I+ AL+   I SD    +M+SI ++A LPAHMQRSW LL+
Sbjct: 318 QFRLHLHCKEMSLPDITQALKYASINSDLDTAEMKSITLEACLPAHMQRSWSLLS 372


>gb|EYU42699.1| hypothetical protein MIMGU_mgv1a006097mg [Erythranthe guttata]
          Length = 457

 Score =  344 bits (882), Expect = e-111
 Identities = 174/235 (74%), Positives = 203/235 (86%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQLSTTILHS+FREKTFGASN+V G+ +ILQKKY+ALVIGSPRRREGLISV
Sbjct: 223 SSGILVMGRTQLSTTILHSVFREKTFGASNNVCGNKKILQKKYWALVIGSPRRREGLISV 282

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL+KVV+DNGKSERITV +NN+TLS QH+ TEYRVI+SS  GY+WLELSPLTGRKHQLRV
Sbjct: 283 PLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSWLELSPLTGRKHQLRV 342

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHKKLG + +S SD K  D+++K K++   LELE+GSISDK
Sbjct: 343 HCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKNDTFALELESGSISDK 402

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           Q  LHLHCK+M LP+I+ AL+   I SD    +M+SI ++A LPAHMQRSW LL+
Sbjct: 403 QFRLHLHCKEMSLPDITQALKYASINSDLDTAEMKSITLEACLPAHMQRSWSLLS 457


>ref|XP_012831075.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Erythranthe guttata]
          Length = 461

 Score =  344 bits (882), Expect = e-111
 Identities = 174/235 (74%), Positives = 203/235 (86%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQLSTTILHS+FREKTFGASN+V G+ +ILQKKY+ALVIGSPRRREGLISV
Sbjct: 227 SSGILVMGRTQLSTTILHSVFREKTFGASNNVCGNKKILQKKYWALVIGSPRRREGLISV 286

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL+KVV+DNGKSERITV +NN+TLS QH+ TEYRVI+SS  GY+WLELSPLTGRKHQLRV
Sbjct: 287 PLVKVVLDNGKSERITVAENNNTLSAQHAVTEYRVIASSSRGYSWLELSPLTGRKHQLRV 346

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHKKLG + +S SD K  D+++K K++   LELE+GSISDK
Sbjct: 347 HCAEVLGTPIVGDYKYGWQAHKKLGHHLDSVSDPKWGDEISKVKNDTFALELESGSISDK 406

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           Q  LHLHCK+M LP+I+ AL+   I SD    +M+SI ++A LPAHMQRSW LL+
Sbjct: 407 QFRLHLHCKEMSLPDITQALKYASINSDLDTAEMKSITLEACLPAHMQRSWSLLS 461


>ref|XP_010647894.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Vitis vinifera]
          Length = 430

 Score =  322 bits (824), Expect = e-103
 Identities = 162/236 (68%), Positives = 191/236 (80%), Gaps = 5/236 (2%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLIS 179
           SSGIL+MGRTQ S TILHSIFREKTFGASN D+    RILQ++Y+ALVIGSPRR  GLIS
Sbjct: 194 SSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLIS 253

Query: 180 VPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLR 359
            PL KVVVD+GKSERIT+VDN  T+S QH+ TEYRVI SS  GYTWLELSPLTGRKHQLR
Sbjct: 254 APLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLR 313

Query: 360 VHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISD 539
           VHCAEVLGTPIVGDYKYGWQAH+K  Q F S  +   D+ ++  K +  GL+LE+GSI D
Sbjct: 314 VHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILD 373

Query: 540 KQPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           KQP LHLHCK+M+LPN+SLALQ  ++ ++    ++ES+   APLP+HMQRSWD+LN
Sbjct: 374 KQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILN 429


>ref|XP_002282614.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Vitis vinifera]
 emb|CBI40257.3| unnamed protein product, partial [Vitis vinifera]
          Length = 476

 Score =  322 bits (824), Expect = e-102
 Identities = 162/236 (68%), Positives = 191/236 (80%), Gaps = 5/236 (2%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLIS 179
           SSGIL+MGRTQ S TILHSIFREKTFGASN D+    RILQ++Y+ALVIGSPRR  GLIS
Sbjct: 240 SSGILIMGRTQTSATILHSIFREKTFGASNNDIDTKKRILQRRYWALVIGSPRRPRGLIS 299

Query: 180 VPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLR 359
            PL KVVVD+GKSERIT+VDN  T+S QH+ TEYRVI SS  GYTWLELSPLTGRKHQLR
Sbjct: 300 APLGKVVVDDGKSERITIVDNVQTMSSQHAITEYRVIKSSCHGYTWLELSPLTGRKHQLR 359

Query: 360 VHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISD 539
           VHCAEVLGTPIVGDYKYGWQAH+K  Q F S  +   D+ ++  K +  GL+LE+GSI D
Sbjct: 360 VHCAEVLGTPIVGDYKYGWQAHRKWKQLFQSNIEKNLDENLSNRKTHPFGLDLESGSILD 419

Query: 540 KQPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           KQP LHLHCK+M+LPN+SLALQ  ++ ++    ++ES+   APLP+HMQRSWD+LN
Sbjct: 420 KQPHLHLHCKQMVLPNVSLALQNLQLSAECDLSELESLEFVAPLPSHMQRSWDILN 475


>ref|XP_022896844.1| RNA pseudouridine synthase 4, mitochondrial [Olea europaea var.
           sylvestris]
          Length = 464

 Score =  315 bits (807), Expect = e-100
 Identities = 168/235 (71%), Positives = 189/235 (80%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRT LS TILHSIFREKTFGAS+DV  S R LQK+Y+ALVIGSPRR  GLISV
Sbjct: 232 SSGILVMGRTLLSATILHSIFREKTFGASDDVLESKRSLQKRYWALVIGSPRRAGGLISV 291

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVV+D+GKSE+ITVVD  H +S QH+ TEYRVISSS  GYTWLELSPLTGRKHQLRV
Sbjct: 292 PLGKVVIDDGKSEKITVVDKFH-MSAQHAVTEYRVISSSSCGYTWLELSPLTGRKHQLRV 350

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAHKK    F + SD + ++K +K K +  GL+LENGSISDK
Sbjct: 351 HCAEVLGTPIVGDYKYGWQAHKKSKHIFVN-SDCQLEEKNSKGKSDPFGLDLENGSISDK 409

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
              LHLHCK+M+LPNI+  L+R    SD     +ESI +DA LP HMQRSWDLLN
Sbjct: 410 HFRLHLHCKQMLLPNIAQVLRRDNPDSDFDSKTVESITIDADLPPHMQRSWDLLN 464


>ref|XP_017230138.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Daucus
           carota subsp. sativus]
 gb|KZN08989.1| hypothetical protein DCAR_001645 [Daucus carota subsp. sativus]
          Length = 453

 Score =  310 bits (793), Expect = 4e-98
 Identities = 162/237 (68%), Positives = 190/237 (80%), Gaps = 6/237 (2%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLIS 179
           SSGILVMGRTQLSTTILHSIFREKTFGAS  D+     ILQ+KY+ALV G PRRR+G IS
Sbjct: 219 SSGILVMGRTQLSTTILHSIFREKTFGASTEDLEEKKEILQRKYWALVFGCPRRRQGNIS 278

Query: 180 VPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLR 359
           +PL KVV+D+GKSERITVVDN +++  QH+ TEYRVI SS  GYTWLEL P TGRKHQLR
Sbjct: 279 LPLGKVVMDDGKSERITVVDNANSMPSQHAITEYRVIGSSSHGYTWLELCPRTGRKHQLR 338

Query: 360 VHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSAS-DLKRDDKMTKFKHNIIGLELENGSIS 536
           VHCAEVLGTPIVGD+KYGWQAH+K   YF S++ +   D+K+ K K    GLELE+GSIS
Sbjct: 339 VHCAEVLGTPIVGDFKYGWQAHRK---YFPSSNVEENLDEKLLKGKKIPFGLELEHGSIS 395

Query: 537 DKQPFLHLHCKKMILPNISLALQRGRIISDQ----MESIRVDAPLPAHMQRSWDLLN 695
           DK+P LHLHCK+M LPN+S AL R +  S Q    +ES+++DAPLP HMQRSWD+LN
Sbjct: 396 DKRPKLHLHCKEMTLPNVSTALDRAQRCSPQNFANLESLKLDAPLPYHMQRSWDILN 452


>ref|XP_018827854.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Juglans regia]
          Length = 391

 Score =  307 bits (786), Expect = 6e-98
 Identities = 154/234 (65%), Positives = 188/234 (80%), Gaps = 4/234 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQ S  +LHSIFREKTFGA +DV    RIL+++Y+ALVIGSPRR++GLISV
Sbjct: 158 SSGILVMGRTQTSAAVLHSIFREKTFGAKDDVDNEVRILERRYWALVIGSPRRQKGLISV 217

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVVVDNGKS+RIT+VDN   +S QH+ T+Y+VI SS  GYTWLELSPLTGRKHQLRV
Sbjct: 218 PLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQVIKSSCYGYTWLELSPLTGRKHQLRV 277

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGD KYGWQAHKKL      + + +  + +TK K    GL+L++GSIS+K
Sbjct: 278 HCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLERESHENVTKGKTIPFGLDLQSGSISEK 337

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLL 692
            P LHLHCK+M+LPN+S+ALQ  +  SD    Q+ES+ + APLP++MQRSWD+L
Sbjct: 338 HPRLHLHCKQMVLPNVSMALQNVQFSSDYHLSQVESLELVAPLPSYMQRSWDIL 391


>ref|XP_018827853.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Juglans regia]
          Length = 476

 Score =  307 bits (786), Expect = 8e-97
 Identities = 154/234 (65%), Positives = 188/234 (80%), Gaps = 4/234 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILVMGRTQ S  +LHSIFREKTFGA +DV    RIL+++Y+ALVIGSPRR++GLISV
Sbjct: 243 SSGILVMGRTQTSAAVLHSIFREKTFGAKDDVDNEVRILERRYWALVIGSPRRQKGLISV 302

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVVVDNGKS+RIT+VDN   +S QH+ T+Y+VI SS  GYTWLELSPLTGRKHQLRV
Sbjct: 303 PLGKVVVDNGKSDRITIVDNAQNMSAQHALTKYQVIKSSCYGYTWLELSPLTGRKHQLRV 362

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGD KYGWQAHKKL      + + +  + +TK K    GL+L++GSIS+K
Sbjct: 363 HCAEVLGTPIVGDLKYGWQAHKKLKHLPWPSLERESHENVTKGKTIPFGLDLQSGSISEK 422

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLL 692
            P LHLHCK+M+LPN+S+ALQ  +  SD    Q+ES+ + APLP++MQRSWD+L
Sbjct: 423 HPRLHLHCKQMVLPNVSMALQNVQFSSDYHLSQVESLELVAPLPSYMQRSWDIL 476


>ref|XP_019225818.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial [Nicotiana
           attenuata]
 gb|OIT32415.1| rna uridine synthase 4, mitochondrial [Nicotiana attenuata]
          Length = 464

 Score =  304 bits (778), Expect = 9e-96
 Identities = 152/235 (64%), Positives = 186/235 (79%), Gaps = 5/235 (2%)
 Frame = +3

Query: 6   SGILVMGRTQLSTTILHSIFREKTFGA-SNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SGILVMGRTQLS ++LHS+FREKTFG  + D+    R+LQK+Y+ALVIG PRR +GLISV
Sbjct: 229 SGILVMGRTQLSASVLHSVFREKTFGTQTEDLESKKRVLQKRYWALVIGCPRRSKGLISV 288

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVV+DNGKSERIT++ +    S Q + TEYR+I SS  GYTWLELSPLTGRKHQLRV
Sbjct: 289 PLGKVVLDNGKSERITIMSDVREPSAQFAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRV 348

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAH+KL    +S S +    ++ + + +   L L NGSISDK
Sbjct: 349 HCAEVLGTPIVGDYKYGWQAHRKLKHLSSSTSIVNLGARIPEQEVDPFSLRLGNGSISDK 408

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           QP LHLHCK+M+LPNISLALQ+ R++SD     +ESI++ APLP+HMQ+SWD L+
Sbjct: 409 QPHLHLHCKEMVLPNISLALQQARVVSDADLVDVESIKLVAPLPSHMQKSWDCLS 463


>ref|XP_019166408.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X1
           [Ipomoea nil]
 ref|XP_019166409.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial isoform X2
           [Ipomoea nil]
          Length = 469

 Score =  304 bits (778), Expect = 1e-95
 Identities = 162/237 (68%), Positives = 189/237 (79%), Gaps = 7/237 (2%)
 Frame = +3

Query: 6   SGILVMGRTQLSTTILHSIFREKTFGASNDVPGSD-RILQKKYYALVIGSPRRREGLISV 182
           SGILVMGRTQLS T+LHSIFREKTF ASND P S  R LQKKY+ALVIG PRR  G+ISV
Sbjct: 234 SGILVMGRTQLSATVLHSIFREKTFEASNDDPESTKRTLQKKYWALVIGCPRRGGGIISV 293

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KV++DNGKS+RITV+D++   S Q + TEYRVI +S  GYTWLELSPLTGRKHQLRV
Sbjct: 294 PLGKVMMDNGKSDRITVMDDDKAQSAQFAVTEYRVIEASDKGYTWLELSPLTGRKHQLRV 353

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYF-NSASD-LKRDDKMTKFKHNIIGLELENGSIS 536
           HCAEVLGTPI+GDY+YGWQAH+KL  +   SASD L+R   +   K +  GL L NGS+S
Sbjct: 354 HCAEVLGTPILGDYRYGWQAHRKLKHHLPRSASDTLERLPGVQ--KEDPFGLGLANGSVS 411

Query: 537 DKQPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           DKQP LHLHCK+M+LPNISLALQR + +SD     +E+I++ APLP HMQRSWD LN
Sbjct: 412 DKQPHLHLHCKEMVLPNISLALQRAQQVSDGDLADVETIKLVAPLPPHMQRSWDHLN 468


>ref|XP_016460522.1| PREDICTED: RNA pseudouridine synthase 4, mitochondrial-like isoform
           X3 [Nicotiana tabacum]
          Length = 365

 Score =  300 bits (768), Expect = 1e-95
 Identities = 150/235 (63%), Positives = 184/235 (78%), Gaps = 5/235 (2%)
 Frame = +3

Query: 6   SGILVMGRTQLSTTILHSIFREKTFGA-SNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SGILVMGRTQLS ++LHS+FREKTFG  + D+    R+LQK+Y+ALVIG PRR +GLISV
Sbjct: 130 SGILVMGRTQLSASVLHSVFREKTFGTQTEDLESKKRVLQKRYWALVIGCPRRSKGLISV 189

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVV+DNGKSERIT++ +    S Q + TEYR+I SS  GYTWLELSPLTGRKHQLRV
Sbjct: 190 PLGKVVLDNGKSERITIMSDVREPSAQFAVTEYRIIGSSEKGYTWLELSPLTGRKHQLRV 249

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAEVLGTPIVGDYKYGWQAH+KL    +S S +    ++ + + +   L L NGSISDK
Sbjct: 250 HCAEVLGTPIVGDYKYGWQAHRKLKHLSSSTSIVNLGARILEQEADPFSLRLGNGSISDK 309

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
           QP LHLHCK+M+LPN SLALQ+ R++S      +ESI++ APLP+HMQ+SWD L+
Sbjct: 310 QPHLHLHCKEMVLPNFSLALQQARVVSGADLVHVESIKLVAPLPSHMQKSWDCLS 364


>ref|XP_022028067.1| RNA pseudouridine synthase 4, mitochondrial [Helianthus annuus]
 gb|OTG30970.1| putative pseudouridine synthase family protein [Helianthus annuus]
          Length = 469

 Score =  303 bits (776), Expect = 2e-95
 Identities = 155/236 (65%), Positives = 185/236 (78%), Gaps = 6/236 (2%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASN-DVPGSDRILQKKYYALVIGSPRRREGLIS 179
           SSGILV+GRTQLS T+LHSIFREKT GASN D+    R LQ+KY+ALVIGSPRR +GLI+
Sbjct: 232 SSGILVLGRTQLSATVLHSIFREKTVGASNIDLKSEKRFLQRKYWALVIGSPRRPQGLIT 291

Query: 180 VPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLR 359
           VPL KVV+D+G+SERITVV+N  T   QH+ TEYRV+ SS  G TWLELSPLTGRKHQLR
Sbjct: 292 VPLGKVVMDDGRSERITVVENVSTTPSQHAITEYRVLDSSVHGLTWLELSPLTGRKHQLR 351

Query: 360 VHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISD 539
           VHCAEVLGTPIVGDYKYGWQAHKK  +   SAS L+   ++        GL LE+GSI+D
Sbjct: 352 VHCAEVLGTPIVGDYKYGWQAHKKWNRAQISASSLEHKTEVCNKTSLPFGLNLESGSITD 411

Query: 540 KQPFLHLHCKKMILPNISLALQRGRIIS-----DQMESIRVDAPLPAHMQRSWDLL 692
           KQP LHLHCKKM+LP++S A++R  + S       ++S++ DAPLPAHMQRSWD+L
Sbjct: 412 KQPNLHLHCKKMVLPDVSSAIKRAHVSSSVYDFSDIKSLKFDAPLPAHMQRSWDIL 467


>gb|KZV33213.1| RNA pseudouridine synthase 4, mitochondrial-like [Dorcoceras
           hygrometricum]
          Length = 469

 Score =  303 bits (775), Expect = 3e-95
 Identities = 156/237 (65%), Positives = 186/237 (78%), Gaps = 8/237 (3%)
 Frame = +3

Query: 6   SGILVMGRTQLSTTILHSIFREKTFGASND----VPGSDRILQKKYYALVIGSPRRREGL 173
           SGILVMGRT+L+ +ILHSIFREKTFGASND    V    + LQK+Y ALVIGSPRR+ GL
Sbjct: 234 SGILVMGRTKLTASILHSIFREKTFGASNDTRNLVVNRKKTLQKRYCALVIGSPRRQGGL 293

Query: 174 ISVPLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQ 353
           IS PL KVVVDNG+SERITVVDN +TLS QH+ TEY+V++SS SGYTWLEL P TGRKHQ
Sbjct: 294 ISTPLGKVVVDNGRSERITVVDNTNTLSAQHAVTEYQVVASSSSGYTWLELYPHTGRKHQ 353

Query: 354 LRVHCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSI 533
           LRVHCAEVLGTPIVGDYKYGWQAHKKL     S SD + ++ ++K     + LELE   +
Sbjct: 354 LRVHCAEVLGTPIVGDYKYGWQAHKKLKHIHASTSDCRWEENISK----NLNLELEKAGV 409

Query: 534 SDKQPFLHLHCKKMILPNISLALQRGRIIS----DQMESIRVDAPLPAHMQRSWDLL 692
           S+K   LHLHCK+M+LPNISL L+ G +IS    ++++ I++DAPLP HMQR WDLL
Sbjct: 410 SNKTLPLHLHCKEMVLPNISLVLENGNMISGFDAERVDHIKIDAPLPPHMQRIWDLL 466


>ref|XP_023924555.1| RNA pseudouridine synthase 4, mitochondrial isoform X1 [Quercus
           suber]
 ref|XP_023924556.1| RNA pseudouridine synthase 4, mitochondrial isoform X2 [Quercus
           suber]
 gb|POE95604.1| rna pseudouridine synthase 4, mitochondrial [Quercus suber]
          Length = 499

 Score =  303 bits (775), Expect = 7e-95
 Identities = 152/235 (64%), Positives = 185/235 (78%), Gaps = 4/235 (1%)
 Frame = +3

Query: 3   SSGILVMGRTQLSTTILHSIFREKTFGASNDVPGSDRILQKKYYALVIGSPRRREGLISV 182
           SSGILV+GRTQ+S T+LHSIFREKT GA +D+   +RILQ+KY+ALVIGSPRR +GLIS 
Sbjct: 267 SSGILVLGRTQISATVLHSIFREKTCGAKDDIDNEERILQRKYWALVIGSPRRPKGLISA 326

Query: 183 PLMKVVVDNGKSERITVVDNNHTLSVQHSATEYRVISSSPSGYTWLELSPLTGRKHQLRV 362
           PL KVVVDNGKS+RIT++DN   +S Q + TEY+VI SS  G+TWLELSPLTGRKHQLRV
Sbjct: 327 PLGKVVVDNGKSDRITIIDNLQNMSAQLAITEYQVIKSSCHGFTWLELSPLTGRKHQLRV 386

Query: 363 HCAEVLGTPIVGDYKYGWQAHKKLGQYFNSASDLKRDDKMTKFKHNIIGLELENGSISDK 542
           HCAE LGTPIVGD KYGWQAH+ L Q       +K ++  TK K    GL+LE+GSIS+K
Sbjct: 387 HCAEALGTPIVGDLKYGWQAHRNLKQL---PCSMKSNENPTKGKTVPFGLDLESGSISEK 443

Query: 543 QPFLHLHCKKMILPNISLALQRGRIISD----QMESIRVDAPLPAHMQRSWDLLN 695
            P LHLHCK+M+LPN+S ALQ  +  SD    ++ES+ + APLP+HMQRSWD+LN
Sbjct: 444 HPHLHLHCKQMVLPNVSEALQNVQFSSDYDLSEVESLELVAPLPSHMQRSWDILN 498