BLASTX nr result
ID: Rehmannia32_contig00014268
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00014268
(422 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PHT95625.1| 30S ribosomal protein S4, chloroplastic [Capsicum... 89 1e-20
gb|PHT95094.1| 30S ribosomal protein S4, chloroplastic [Capsicum... 89 3e-20
gb|PHT78032.1| 30S ribosomal protein S4, chloroplastic [Capsicum... 89 3e-20
gb|KHN41771.1| 30S ribosomal protein S4, chloroplastic [Glycine ... 87 1e-19
gb|ABA01249.1| ribosomal protein S4, partial (chloroplast) [Pass... 89 2e-19
ref|YP_009366180.1| ribosomal protein S4 (plastid) [Jasminum sam... 89 2e-19
ref|YP_004564006.1| ribosomal protein S4 [Olea woodiana subsp. w... 89 2e-19
gb|ABG74794.1| ribosomal protein S4 (chloroplast) [Jasminum abys... 89 2e-19
gb|ABG74820.1| ribosomal protein S4 (chloroplast) [Jasminum subh... 89 2e-19
emb|CAL37361.1| ribosomal protein S4, partial (chloroplast) [Chi... 89 3e-19
emb|CAL37366.1| ribosomal protein S4, partial (chloroplast) [Lig... 89 3e-19
emb|CAL37357.1| ribosomal protein S4, partial (chloroplast) [Abe... 89 3e-19
emb|CAL37355.1| ribosomal protein S4, partial (chloroplast) [Scr... 89 3e-19
emb|CAL37367.1| ribosomal protein S4, partial (chloroplast) [Syr... 89 3e-19
emb|CAL37360.1| ribosomal protein S4, partial (chloroplast) [Fra... 89 3e-19
gb|ABV65314.1| ribosomal protein S4, partial (chloroplast) [Lyth... 89 3e-19
ref|YP_009389843.1| ribosomal protein S4 (chloroplast) [Caragana... 89 3e-19
ref|YP_009462432.1| ribosomal protein S4 (chloroplast) [Syringa ... 89 3e-19
ref|YP_009462168.1| ribosomal protein S4 (chloroplast) [Noronhia... 89 3e-19
ref|YP_009468609.1| 30S ribosomal protein S4 (plastid) [Fraxinus... 89 3e-19
>gb|PHT95625.1| 30S ribosomal protein S4, chloroplastic [Capsicum annuum]
Length = 65
Score = 89.0 bits (219), Expect = 1e-20
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 25 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 65
>gb|PHT95094.1| 30S ribosomal protein S4, chloroplastic [Capsicum annuum]
Length = 102
Score = 89.0 bits (219), Expect = 3e-20
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 62 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 102
>gb|PHT78032.1| 30S ribosomal protein S4, chloroplastic [Capsicum annuum]
Length = 102
Score = 89.0 bits (219), Expect = 3e-20
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 62 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 102
>gb|KHN41771.1| 30S ribosomal protein S4, chloroplastic [Glycine soja]
Length = 113
Score = 87.4 bits (215), Expect = 1e-19
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGL+NQIID+KWVGLKINELLVVEYYSRQT
Sbjct: 73 PNHLTLHPFQYKGLINQIIDNKWVGLKINELLVVEYYSRQT 113
>gb|ABA01249.1| ribosomal protein S4, partial (chloroplast) [Passiflora arborea]
Length = 186
Score = 89.0 bits (219), Expect = 2e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 146 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 186
>ref|YP_009366180.1| ribosomal protein S4 (plastid) [Jasminum sambac]
gb|ARJ61798.1| ribosomal protein S4 (plastid) [Jasminum sambac]
Length = 203
Score = 89.4 bits (220), Expect = 2e-19
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT*T 293
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT T
Sbjct: 161 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTKT 203
>ref|YP_004564006.1| ribosomal protein S4 [Olea woodiana subsp. woodiana]
emb|CBS29352.1| ribosomal protein S4 (chloroplast) [Olea woodiana subsp. woodiana]
Length = 203
Score = 89.4 bits (220), Expect = 2e-19
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT*T 293
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT T
Sbjct: 161 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTET 203
>gb|ABG74794.1| ribosomal protein S4 (chloroplast) [Jasminum abyssinicum]
Length = 203
Score = 89.4 bits (220), Expect = 2e-19
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT*T 293
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT T
Sbjct: 161 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTKT 203
>gb|ABG74820.1| ribosomal protein S4 (chloroplast) [Jasminum subhumile]
Length = 203
Score = 89.4 bits (220), Expect = 2e-19
Identities = 42/43 (97%), Positives = 42/43 (97%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT*T 293
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT T
Sbjct: 161 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQTKT 203
>emb|CAL37361.1| ribosomal protein S4, partial (chloroplast) [Chionanthus
virginicus]
emb|CAL37362.1| ribosomal protein S4, partial (chloroplast) [Forestiera
neomexicana]
emb|CAL37363.1| ribosomal protein S4, partial (chloroplast) [Olea europaea]
emb|CAL37364.1| ribosomal protein S4, partial (chloroplast) [Osmanthus
heterophyllus]
emb|CAL37365.1| ribosomal protein S4, partial (chloroplast) [Phillyrea
angustifolia]
Length = 194
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 154 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 194
>emb|CAL37366.1| ribosomal protein S4, partial (chloroplast) [Ligustrum ovalifolium]
Length = 194
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 154 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 194
>emb|CAL37357.1| ribosomal protein S4, partial (chloroplast) [Abeliophyllum
distichum]
emb|CAL37358.1| ribosomal protein S4, partial (chloroplast) [Forsythia x
intermedia]
Length = 194
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 154 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 194
>emb|CAL37355.1| ribosomal protein S4, partial (chloroplast) [Scrophularia vernalis]
Length = 194
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 154 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 194
>emb|CAL37367.1| ribosomal protein S4, partial (chloroplast) [Syringa vulgaris]
Length = 194
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 154 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 194
>emb|CAL37360.1| ribosomal protein S4, partial (chloroplast) [Fraxinus excelsior]
Length = 194
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 154 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 194
>gb|ABV65314.1| ribosomal protein S4, partial (chloroplast) [Lythrum flagellare]
Length = 195
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 155 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 195
>ref|YP_009389843.1| ribosomal protein S4 (chloroplast) [Caragana kozlowii]
gb|APL97283.1| ribosomal protein S4 (chloroplast) [Caragana kozlowii]
Length = 198
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 158 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 198
>ref|YP_009462432.1| ribosomal protein S4 (chloroplast) [Syringa vulgaris]
gb|AUT85282.1| ribosomal protein S4 (chloroplast) [Syringa vulgaris]
Length = 201
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 161 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_009462168.1| ribosomal protein S4 (chloroplast) [Noronhia lowryi]
gb|AUT84491.1| ribosomal protein S4 (chloroplast) [Noronhia lowryi]
Length = 201
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 161 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201
>ref|YP_009468609.1| 30S ribosomal protein S4 (plastid) [Fraxinus chiisanensis]
gb|AUT84315.1| ribosomal protein S4 (chloroplast) [Fraxinus ornus]
gb|AVA09398.1| 30S ribosomal protein S4 (plastid) [Fraxinus chiisanensis]
gb|AVM38740.1| ribosomal protein S4 (chloroplast) [Fraxinus excelsior]
Length = 201
Score = 89.0 bits (219), Expect = 3e-19
Identities = 41/41 (100%), Positives = 41/41 (100%)
Frame = -2
Query: 421 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 299
PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT
Sbjct: 161 PNHLTLHPFQYKGLVNQIIDSKWVGLKINELLVVEYYSRQT 201