BLASTX nr result

ID: Rehmannia32_contig00014022 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00014022
         (543 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN27003.1| putative protein, contains kelch repeat [Handroan...    77   3e-13
gb|PIN23839.1| Kelch repeat-containing protein [Handroanthus imp...    77   4e-13
ref|XP_011101964.1| RING finger protein B isoform X2 [Sesamum in...    63   3e-08
ref|XP_011101963.1| RING finger protein B isoform X1 [Sesamum in...    62   4e-08

>gb|PIN27003.1| putative protein, contains kelch repeat [Handroanthus
           impetiginosus]
          Length = 582

 Score = 77.4 bits (189), Expect = 3e-13
 Identities = 41/60 (68%), Positives = 47/60 (78%)
 Frame = -2

Query: 461 KNLAVAETSMPQEVPAVSASYMEPDINVGSNVAANPSSSDAEIRTENVSAVVEDQNAPLN 282
           K+LA AE+SM QEV  VS    EPDIN GS+V  NPSSSDAEI+ ENVSAVV+DQN PL+
Sbjct: 523 KDLAAAESSMLQEVLGVSEQPTEPDINAGSDVTNNPSSSDAEIQKENVSAVVKDQNIPLH 582


>gb|PIN23839.1| Kelch repeat-containing protein [Handroanthus impetiginosus]
          Length = 531

 Score = 77.0 bits (188), Expect = 4e-13
 Identities = 40/60 (66%), Positives = 47/60 (78%)
 Frame = -2

Query: 461 KNLAVAETSMPQEVPAVSASYMEPDINVGSNVAANPSSSDAEIRTENVSAVVEDQNAPLN 282
           K+ A AE+SMPQEV  VS    EP+IN GS+V  NPSSSDAEI+ ENVSAVV+DQN PL+
Sbjct: 472 KDPAAAESSMPQEVLGVSEQPTEPNINAGSDVTNNPSSSDAEIQKENVSAVVKDQNTPLH 531


>ref|XP_011101964.1| RING finger protein B isoform X2 [Sesamum indicum]
          Length = 559

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 34/57 (59%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = -2

Query: 461 KNLAVAETSMPQE-VPAVSASYMEPDINVGSNVAANPSSSDAEIRTENVSAVVEDQN 294
           K+ A +E+S+PQE VP VS   M  D+N  SN   NPSSSDAE   ENVSAVV+DQN
Sbjct: 500 KSSAASESSIPQEQVPEVSEPPMPADVNAASNATNNPSSSDAETHKENVSAVVKDQN 556


>ref|XP_011101963.1| RING finger protein B isoform X1 [Sesamum indicum]
          Length = 560

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/58 (58%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
 Frame = -2

Query: 461 KNLAVAETSMPQE--VPAVSASYMEPDINVGSNVAANPSSSDAEIRTENVSAVVEDQN 294
           K+ A +E+S+PQE  VP VS   M  D+N  SN   NPSSSDAE   ENVSAVV+DQN
Sbjct: 500 KSSAASESSIPQEQQVPEVSEPPMPADVNAASNATNNPSSSDAETHKENVSAVVKDQN 557


Top