BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00010938
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012829497.1| PREDICTED: sm-like protein LSM3A [Erythranth...   140   8e-41
ref|XP_022854862.1| sm-like protein LSM3A isoform X2 [Olea europ...   140   1e-40
ref|XP_012839233.1| PREDICTED: sm-like protein LSM3A [Erythranth...   140   1e-40
ref|XP_020083900.1| sm-like protein LSM3A [Ananas comosus] >gi|1...   139   4e-40
gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Erythra...   140   6e-40
ref|XP_011074758.1| sm-like protein LSM3A [Sesamum indicum]           138   7e-40
gb|PIM99001.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Han...   138   9e-40
ref|XP_011101520.1| sm-like protein LSM3A [Sesamum indicum]           138   9e-40
emb|CDP11392.1| unnamed protein product [Coffea canephora]            138   9e-40
gb|KHN15430.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine...   137   2e-39
ref|XP_009402631.1| PREDICTED: sm-like protein LSM3B [Musa acumi...   137   2e-39
ref|XP_019465241.1| PREDICTED: sm-like protein LSM3B [Lupinus an...   137   3e-39
ref|XP_022773387.1| sm-like protein LSM3B [Durio zibethinus]          137   3e-39
gb|AFK35032.1| unknown [Lotus japonicus] >gi|388511495|gb|AFK438...   137   3e-39
gb|KZV16527.1| hypothetical protein F511_11359 [Dorcoceras hygro...   137   3e-39
ref|XP_004290522.1| PREDICTED: sm-like protein LSM3B [Fragaria v...   137   3e-39
ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycin...   137   3e-39
ref|XP_003607812.1| u6 snRNA-associated-like-Smprotein [Medicago...   137   3e-39
ref|XP_004513701.1| PREDICTED: sm-like protein LSM3A [Cicer arie...   137   3e-39
dbj|GAU51075.1| hypothetical protein TSUD_291110 [Trifolium subt...   137   3e-39

>ref|XP_012829497.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
          Length = 97

 Score =  140 bits (354), Expect = 8e-41
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 28  LRHDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|XP_022854862.1| sm-like protein LSM3A isoform X2 [Olea europaea var. sylvestris]
 ref|XP_022894278.1| sm-like protein LSM3A [Olea europaea var. sylvestris]
          Length = 97

 Score =  140 bits (353), Expect = 1e-40
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEI+TSVEIDDETYEEIVRTT+RTVPFLFVRGDGV
Sbjct: 28  LRHDRELRGKLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTRRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|XP_012839233.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
 ref|XP_012839234.1| PREDICTED: sm-like protein LSM3A [Erythranthe guttata]
 gb|EYU36853.1| hypothetical protein MIMGU_mgv1a017018mg [Erythranthe guttata]
 gb|EYU36854.1| hypothetical protein MIMGU_mgv1a017018mg [Erythranthe guttata]
          Length = 97

 Score =  140 bits (353), Expect = 1e-40
 Identities = 68/70 (97%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 28  LRHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|XP_020083900.1| sm-like protein LSM3A [Ananas comosus]
 gb|OAY70168.1| Sm-like protein LSM3B [Ananas comosus]
 gb|OAY72633.1| Sm-like protein LSM3B [Ananas comosus]
          Length = 97

 Score =  139 bits (349), Expect = 4e-40
 Identities = 66/70 (94%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTT+RT+PFLFVRGDGV
Sbjct: 28  LRHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRTIPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>gb|EYU17441.1| hypothetical protein MIMGU_mgv1a015297mg [Erythranthe guttata]
          Length = 162

 Score =  140 bits (354), Expect = 6e-40
 Identities = 69/70 (98%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 93  LRHDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 152

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 153 ILVSPPLRTA 162


>ref|XP_011074758.1| sm-like protein LSM3A [Sesamum indicum]
          Length = 98

 Score =  138 bits (348), Expect = 7e-40
 Identities = 67/70 (95%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEIIT++EIDDETYEEIVRTT+RTVPFLFVRGDGV
Sbjct: 28  LRHDRELRGKLHAYDQHLNMILGDVEEIITTMEIDDETYEEIVRTTRRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>gb|PIM99001.1| Small nuclear ribonucleoprotein (snRNP) LSM3 [Handroanthus
           impetiginosus]
          Length = 97

 Score =  138 bits (347), Expect = 9e-40
 Identities = 66/70 (94%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEI+T++EIDDETYEEIVRTT+RTVPFLFVRGDGV
Sbjct: 28  LRHDRELRGKLHAYDQHLNMILGDVEEIVTTMEIDDETYEEIVRTTRRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|XP_011101520.1| sm-like protein LSM3A [Sesamum indicum]
          Length = 97

 Score =  138 bits (347), Expect = 9e-40
 Identities = 66/70 (94%), Positives = 70/70 (100%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEI+T++EIDDETYEEIVRTT+RTVPFLFVRGDGV
Sbjct: 28  LRHDRELRGKLHAYDQHLNMILGDVEEIVTTLEIDDETYEEIVRTTRRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>emb|CDP11392.1| unnamed protein product [Coffea canephora]
          Length = 98

 Score =  138 bits (347), Expect = 9e-40
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEE++T+VEIDDETYEEIVRTTKR VPFLFVRGDGV
Sbjct: 29  LRHDRELRGKLHAYDQHLNMILGDVEEVVTTVEIDDETYEEIVRTTKRNVPFLFVRGDGV 88

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 89  ILVSPPLRTA 98


>gb|KHN15430.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine soja]
 gb|KRH70311.1| hypothetical protein GLYMA_02G082300 [Glycine max]
          Length = 97

 Score =  137 bits (345), Expect = 2e-39
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEIIT+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 28  LRSDRELRGKLHAYDQHLNMILGDVEEIITTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|XP_009402631.1| PREDICTED: sm-like protein LSM3B [Musa acuminata subsp.
           malaccensis]
          Length = 97

 Score =  137 bits (345), Expect = 2e-39
 Identities = 68/70 (97%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTT+RTVPFLFVRGDGV
Sbjct: 28  LRSDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTRRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|XP_019465241.1| PREDICTED: sm-like protein LSM3B [Lupinus angustifolius]
 gb|OIV98878.1| hypothetical protein TanjilG_21709 [Lupinus angustifolius]
          Length = 96

 Score =  137 bits (344), Expect = 3e-39
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 27  LRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 86

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 87  ILVSPPLRTA 96


>ref|XP_022773387.1| sm-like protein LSM3B [Durio zibethinus]
          Length = 97

 Score =  137 bits (344), Expect = 3e-39
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 28  LRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>gb|AFK35032.1| unknown [Lotus japonicus]
 gb|AFK43809.1| unknown [Lotus japonicus]
          Length = 97

 Score =  137 bits (344), Expect = 3e-39
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 28  LRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>gb|KZV16527.1| hypothetical protein F511_11359 [Dorcoceras hygrometricum]
          Length = 97

 Score =  137 bits (344), Expect = 3e-39
 Identities = 66/70 (94%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LRHDRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTT+R VPFLFVRGDGV
Sbjct: 28  LRHDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTRRMVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|XP_004290522.1| PREDICTED: sm-like protein LSM3B [Fragaria vesca subsp. vesca]
 ref|XP_024162124.1| sm-like protein LSM3B [Rosa chinensis]
 gb|PRQ24723.1| putative sm-like protein Lsm3 [Rosa chinensis]
          Length = 97

 Score =  137 bits (344), Expect = 3e-39
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEI+TSVEIDDETYEEIVRTTKRTVP+LFVRGDGV
Sbjct: 28  LRSDRELRGKLHAYDQHLNMILGDVEEIVTSVEIDDETYEEIVRTTKRTVPYLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|NP_001235961.1| uncharacterized protein LOC100499782 [Glycine max]
 ref|XP_014506299.1| sm-like protein LSM3A [Vigna radiata var. radiata]
 ref|XP_017438868.1| PREDICTED: sm-like protein LSM3A [Vigna angularis]
 ref|XP_020238104.1| sm-like protein LSM3A [Cajanus cajan]
 gb|ACU13588.1| unknown [Glycine max]
 gb|KHN41267.1| U6 snRNA-associated Sm-like protein LSm3 [Glycine soja]
 gb|KOM55421.1| hypothetical protein LR48_Vigan10g131300 [Vigna angularis]
 gb|KRH08702.1| hypothetical protein GLYMA_16G167900 [Glycine max]
 dbj|BAU02053.1| hypothetical protein VIGAN_11146700 [Vigna angularis var.
           angularis]
 gb|KYP43948.1| U6 snRNA-associated Sm-like protein LSm3 [Cajanus cajan]
 gb|PON76226.1| LSM domain/archaea-type [Parasponia andersonii]
 gb|PON83050.1| LSM domain/archaea-type [Trema orientalis]
          Length = 97

 Score =  137 bits (344), Expect = 3e-39
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 28  LRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 87

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 88  ILVSPPLRTA 97


>ref|XP_003607812.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
 gb|AES90009.1| u6 snRNA-associated-like-Smprotein [Medicago truncatula]
          Length = 98

 Score =  137 bits (344), Expect = 3e-39
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 29  LRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 88

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 89  ILVSPPLRTA 98


>ref|XP_004513701.1| PREDICTED: sm-like protein LSM3A [Cicer arietinum]
          Length = 98

 Score =  137 bits (344), Expect = 3e-39
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 29  LRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 88

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 89  ILVSPPLRTA 98


>dbj|GAU51075.1| hypothetical protein TSUD_291110 [Trifolium subterraneum]
          Length = 101

 Score =  137 bits (344), Expect = 3e-39
 Identities = 67/70 (95%), Positives = 69/70 (98%)
 Frame = +3

Query: 3   LRHDRELRGKLHAYDQHLNMILGDVEEIITSVEIDDETYEEIVRTTKRTVPFLFVRGDGV 182
           LR DRELRGKLHAYDQHLNMILGDVEEI+T+VEIDDETYEEIVRTTKRTVPFLFVRGDGV
Sbjct: 29  LRSDRELRGKLHAYDQHLNMILGDVEEIVTTVEIDDETYEEIVRTTKRTVPFLFVRGDGV 88

Query: 183 ILVSPPLRTA 212
           ILVSPPLRTA
Sbjct: 89  ILVSPPLRTA 98