BLASTX nr result

ID: Rehmannia32_contig00010698 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00010698
         (637 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CDP14369.1| unnamed protein product [Coffea canephora]             58   2e-06

>emb|CDP14369.1| unnamed protein product [Coffea canephora]
          Length = 347

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 1/188 (0%)
 Frame = -1

Query: 637 VNRALHDWQEFDIAAGTKIGGAKKETSAKENMEARTVDTRSVGHYLVVL-SAVKVGSNKS 461
           VN+A  +W+EF  A     G     T+ KE +         VG   +   +AV+  + ++
Sbjct: 148 VNKATREWREFQEAQDVDGGNGSHTTNGKEGLGGWREP--EVGWVKINSDAAVQQKAERA 205

Query: 460 GWGGWIRAEKEGITRAWATSRDEVYHPVEATLVGIRQALCFAEKSKARTLTIQIENRSLV 281
           GWG   R        AWA          +   + +R A+  A++   R +  + + + L+
Sbjct: 206 GWGMIARDCLGNALGAWAVPDTCCSSAKQEEALALRSAMLMAKQQGWRRVVFESDCKQLI 265

Query: 280 QSLNSRATFDSKCEKIAEDICLLSSLFDSVVFANQDHKNLSFCNRLVSLALSSDCDLDWC 101
            S+NS    DS    I  DI  L S F    F+     N S  + L  LALS D   +W 
Sbjct: 266 DSINS-GDGDSDIATILLDIVSLKSNFYKCCFSFTRRMNNSVSHSLAKLALSLDGPAEWK 324

Query: 100 NQFSNWLV 77
             F  WL+
Sbjct: 325 VVFPAWLL 332


Top