BLASTX nr result

ID: Rehmannia32_contig00010456 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00010456
         (471 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011077229.1| LOW QUALITY PROTEIN: protein RDM16-like [Ses...   107   5e-24
ref|XP_012858461.1| PREDICTED: U4/U6 small nuclear ribonucleopro...    96   4e-20

>ref|XP_011077229.1| LOW QUALITY PROTEIN: protein RDM16-like [Sesamum indicum]
          Length = 802

 Score =  107 bits (267), Expect = 5e-24
 Identities = 60/128 (46%), Positives = 76/128 (59%)
 Frame = -1

Query: 384 TEREGSRDRDTHRDHERSHSVXXXXXXXXXXXXXXXXXRTRVHEDNGREKRRFEDAKLRE 205
           T+REGSRDRD+ R+ ERSHSV                 RTRV+E+NGREK RFED K+++
Sbjct: 50  TDREGSRDRDSRRERERSHSVERKKRKERDESEERSDKRTRVYEENGREKSRFEDVKVKD 109

Query: 204 DEKNXXXXXXXXXXXKSVKKDAKDESRDTGKRVETVSVANGVATGPIXXXXXXXXXXSVA 25
           D++            KSVKKDAK ESRD+G + +  SVAN +ATGP+           VA
Sbjct: 110 DDRERKEGEGFGSEGKSVKKDAKYESRDSGHQSKAGSVANSLATGPVSTPSSISPETFVA 169

Query: 24  RSHSPATK 1
            + SPATK
Sbjct: 170 HTSSPATK 177


>ref|XP_012858461.1| PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3 isoform X1
           [Erythranthe guttata]
 gb|EYU19876.1| hypothetical protein MIMGU_mgv1a001331mg [Erythranthe guttata]
          Length = 838

 Score = 96.3 bits (238), Expect = 4e-20
 Identities = 57/127 (44%), Positives = 69/127 (54%)
 Frame = -1

Query: 381 EREGSRDRDTHRDHERSHSVXXXXXXXXXXXXXXXXXRTRVHEDNGREKRRFEDAKLRED 202
           EREGSR+RD  R+ ERS SV                 RTRV+E++GREKRRFED +++ED
Sbjct: 73  EREGSRERDVRRERERSRSVERKKRKERGDSEERSDKRTRVYEESGREKRRFEDVRVKED 132

Query: 201 EKNXXXXXXXXXXXKSVKKDAKDESRDTGKRVETVSVANGVATGPIXXXXXXXXXXSVAR 22
           + +           KSVK D+  ESRD GKR ET  VANG ATGP             AR
Sbjct: 133 DIDGKETDGFGFEGKSVKNDSNYESRDGGKRAETGLVANGAATGPPTAQSSISPETMEAR 192

Query: 21  SHSPATK 1
           +H   TK
Sbjct: 193 NHPSTTK 199


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