BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00009471
         (360 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011091341.1| RNA-binding protein CP33, chloroplastic [Ses...    63   3e-09
gb|PIN15653.1| Splicing factor 3b, subunit 4 [Handroanthus impet...    60   3e-08
gb|KZV34027.1| hypothetical protein F511_02800 [Dorcoceras hygro...    52   4e-06

>ref|XP_011091341.1| RNA-binding protein CP33, chloroplastic [Sesamum indicum]
          Length = 283

 Score = 63.2 bits (152), Expect = 3e-09
 Identities = 31/56 (55%), Positives = 43/56 (76%), Gaps = 3/56 (5%)
 Frame = +3

Query: 99  MQSFKCVSSKSWPNNDHMLKISSSKTFQPASLSHSLGIEFNSISNN---KWRVSRI 257
           ++SFKCVSSK+WP+ DH+LKIS  +T Q A +SHSL  EFN I+++    WR+SR+
Sbjct: 15  IKSFKCVSSKNWPS-DHLLKISCPRTLQSAPVSHSLVFEFNPITSSACKSWRLSRV 69


>gb|PIN15653.1| Splicing factor 3b, subunit 4 [Handroanthus impetiginosus]
          Length = 289

 Score = 60.5 bits (145), Expect = 3e-08
 Identities = 35/55 (63%), Positives = 43/55 (78%), Gaps = 2/55 (3%)
 Frame = +3

Query: 99  MQSFKCVSSKSWPNNDHMLKISSSKT-FQPASLSHSLGI-EFNSISNNKWRVSRI 257
           M+S KC+SSK+W +NDH+LKIS  +T  +PAS+SH LGI E N IS  KWRVSRI
Sbjct: 17  MKSLKCISSKNW-SNDHLLKISCPRTVLKPASVSHFLGIQELNPIS--KWRVSRI 68


>gb|KZV34027.1| hypothetical protein F511_02800 [Dorcoceras hygrometricum]
          Length = 106

 Score = 52.0 bits (123), Expect = 4e-06
 Identities = 25/53 (47%), Positives = 35/53 (66%)
 Frame = +3

Query: 99  MQSFKCVSSKSWPNNDHMLKISSSKTFQPASLSHSLGIEFNSISNNKWRVSRI 257
           +QS KC+  K+WPN+ H LKIS ++  + AS+S  LG E N    NKWR+ R+
Sbjct: 14  VQSLKCLGLKTWPNDHHQLKISCTRILRSASVSCFLGNESNQ-PVNKWRIPRL 65