BLASTX nr result
ID: Rehmannia32_contig00007298
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00007298
(3106 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_019163484.1| PREDICTED: uncharacterized protein LOC109159... 770 0.0
gb|ADB85398.1| putative retrotransposon protein [Phyllostachys e... 712 0.0
ref|XP_023156358.1| uncharacterized protein LOC111589729 isoform... 684 0.0
ref|XP_020092846.1| uncharacterized protein LOC109713256 [Ananas... 718 0.0
dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group] 689 0.0
emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group] 710 0.0
gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 691 0.0
gb|AAP53789.1| retrotransposon protein, putative, unclassified [... 707 0.0
gb|PKA46982.1| putative mitochondrial protein [Apostasia shenzhe... 667 0.0
gb|ABA95319.1| retrotransposon protein, putative, unclassified [... 678 0.0
emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group] 689 0.0
gb|PKA61698.1| putative mitochondrial protein [Apostasia shenzhe... 689 0.0
gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense] 689 0.0
gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group] 670 0.0
gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense] 653 0.0
gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium prat... 684 0.0
gb|ABF94845.1| retrotransposon protein, putative, unclassified [... 655 0.0
ref|XP_022547700.1| uncharacterized protein LOC111200699 [Brassi... 636 0.0
gb|PKA66820.1| putative mitochondrial protein [Apostasia shenzhe... 669 0.0
gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense] 680 0.0
>ref|XP_019163484.1| PREDICTED: uncharacterized protein LOC109159828 [Ipomoea nil]
Length = 1873
Score = 770 bits (1988), Expect = 0.0
Identities = 382/722 (52%), Positives = 513/722 (71%), Gaps = 3/722 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
KT+K LRGFLGLTGYYR+FIR YGVLSKPLT +LK D F W +++ AF LK A+ +P
Sbjct: 852 KTVKALRGFLGLTGYYRRFIRAYGVLSKPLTEMLKNDGFKWGPKSDQAFEQLKSALCNSP 911
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL LP+F K F++E DAS G+GAVL+QEG+PIA+ SK + LSI ++E+L+++
Sbjct: 912 VLALPNFQKDFIVEADASHKGMGAVLVQEGKPIAFFSKAFGEKHLGLSIYEKEYLSIINV 971
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+ +W+ YL F IKTD +L++LL+Q+I T +QQK +++LLGLDY IQYK+G +N+V
Sbjct: 972 VDRWRPYLLERHFAIKTDHHSLQFLLEQKITTALQQKGLSKLLGLDYSIQYKRGADNQVA 1031
Query: 879 DTLSRRDVKEDNC-NALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGG 1055
D LSRRD E NA++ + P WL+EV+NSY D++ + + A +DPT V G
Sbjct: 1032 DALSRRDYDEGPVLNAISVVQPQWLEEVLNSYTGDTWASTNLTAALIDPTD-TTITVTSG 1090
Query: 1056 IVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVK 1235
++RYKGRL IGS+ LR ++ +H SA GGHSG GTY R+K +FYW +K DVI+LV+
Sbjct: 1091 LLRYKGRLYIGSNGTLRKELMLKLHESAIGGHSGQTGTYQRMKALFYWKGLKRDVIELVR 1150
Query: 1236 SCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYA 1415
+CDTC+ K +N A PGLLQPL++P +AW+ I+MDFIEGLP S KNVILVVVDR TKYA
Sbjct: 1151 TCDTCQRCKHENVANPGLLQPLNIPEEAWQSISMDFIEGLPLSKQKNVILVVVDRLTKYA 1210
Query: 1416 HFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSS 1595
HF+A+SHP++A +A LF++ IYRLHGLP SI+SDRDK+FTS FW+ LFK M V L++S+
Sbjct: 1211 HFIAVSHPYTAEIIANLFMENIYRLHGLPRSIISDRDKVFTSRFWQALFKNMQVQLNLST 1270
Query: 1596 AYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALY 1775
AYHPQ+DGQTER+N CLE+YLRCM + P W +WL LAE+WYNTNYH++LK T FQALY
Sbjct: 1271 AYHPQTDGQTERVNQCLESYLRCMAFQKPASWGKWLHLAEWWYNTNYHSALKCTPFQALY 1330
Query: 1776 GYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
GY PP L ++ + +R + L++NL QAHNR+K ADK RSE+ V
Sbjct: 1331 GYTPPALVCNAI---HKDDESSWLIERNAVLATLKENLKQAHNRMKVQADKGRSERILMV 1387
Query: 1956 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 2135
GD V+LK+QP+RQ S+++R +LKL+++YYGPY V+EK+G VAY+L L G+++HPVFHV
Sbjct: 1388 GDWVYLKVQPYRQVSLAVRSNLKLASKYYGPYKVIEKVGAVAYKLQLPAGAQLHPVFHVS 1447
Query: 2136 LLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKA 2315
LKKRV +GT D P++D +G EP+ VL R+V+R V Q+L+QWANL A
Sbjct: 1448 QLKKRVGEGTVVQLDPPVLDKDGQLLTEPVAVLGKRLVERNNQAVTQLLVQWANLPDSAA 1507
Query: 2316 TWEDKKFIEKKFPSFNPWGQGLSPPRGIV--MNMAENGQDFGGKLIGAGGRNANWRKTNL 2489
TWED ++ +FPSF+PWGQG S G V + NG+D GK G N + + +
Sbjct: 1508 TWEDYYHLKSQFPSFDPWGQGSSSGGGDVTTLQAGPNGEDKEGK--GREATNEKEKSSRV 1565
Query: 2490 ED 2495
+D
Sbjct: 1566 KD 1567
Score = 159 bits (401), Expect = 2e-35
Identities = 75/130 (57%), Positives = 94/130 (72%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH G YEF VMPFGL NAPATFQ+LMN +F+ LRKFVLVFFDDIL+YS SWE H HL+
Sbjct: 739 THQGLYEFKVMPFGLTNAPATFQALMNSVFKPLLRKFVLVFFDDILVYSPSWEVHWQHLR 798
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
+V LT+R +QL K SKC+F Q ++EY+GHIIS G+ DP K+ ++ WP PK + +
Sbjct: 799 EVLLTMRQHQLLAKMSKCSFAQTQVEYLGHIISQEGLQTDPTKLEAVAAWPRPKTVKALR 858
Query: 361 DF*VLQGITG 390
F G+TG
Sbjct: 859 GF---LGLTG 865
>gb|ADB85398.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1348
Score = 712 bits (1838), Expect = 0.0
Identities = 340/672 (50%), Positives = 470/672 (69%)
Frame = +3
Query: 345 LKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPVL 524
L QLR FLG+TGYYR+FIR+YGV+ +PL +L+K F W + AF+ LK AM TAPVL
Sbjct: 666 LTQLRSFLGMTGYYRRFIRHYGVICRPLYDMLRKGGFDWKDPQDEAFVKLKLAMTTAPVL 725
Query: 525 TLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAIQ 704
LPDF++ F LETDASGTG+G VLMQ GRP+AY S+ L A+S RE LA++ +++
Sbjct: 726 ALPDFSENFTLETDASGTGIGGVLMQRGRPLAYFSRTLGVRAAAMSTYDREALAIIESLK 785
Query: 705 KWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVDT 884
+W+HY G + +I+TDQQ+LK++ DQ++ +Q K + +LL DY I+YKKG EN+V D
Sbjct: 786 RWRHYFLGTQLIIRTDQQSLKFMTDQKVAEGIQHKLMLRLLEFDYTIEYKKGKENKVADA 845
Query: 885 LSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIVR 1064
LSRR ++ A++ P+W++ V NSY ND+ +++ TL P + + G++R
Sbjct: 846 LSRRG---NSVMAISIAVPSWIEAVTNSYQNDANCKELMEQLTLAPNADSGYTLNAGVLR 902
Query: 1065 YKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSCD 1244
YKGR+ +G DP+LR I+ ++H SA GGHSG TY R+K +FYWP MK ++ +V+ C
Sbjct: 903 YKGRIYVGKDPELRLNIIHSLHMSAVGGHSGRVATYQRVKHLFYWPGMKKEIHTMVRECA 962
Query: 1245 TCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHFM 1424
C+ +K ++ YPGLL+PL +P AW HI+MDFIEGLP S GK VI VVVDRFTKYAH +
Sbjct: 963 VCQRSKAEHCHYPGLLEPLPIPDMAWTHISMDFIEGLPSSKGKEVIFVVVDRFTKYAHSV 1022
Query: 1425 ALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAYH 1604
LSHP+S VA+ F+D I++LHG P++IVSDRD+IFTS W+ELFK M V L S+AYH
Sbjct: 1023 PLSHPYSVQLVAQAFIDNIFKLHGFPIAIVSDRDRIFTSKLWQELFKSMKVQLRFSTAYH 1082
Query: 1605 PQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGYP 1784
PQ+DGQTER+N C+E+YLRCM + PK W WL LAE+WYNT +HT+LK + FQALYG+P
Sbjct: 1083 PQTDGQTERVNQCVESYLRCMAMQEPKKWVSWLPLAEWWYNTTFHTALKLSPFQALYGFP 1142
Query: 1785 PPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVGDQ 1964
PPL++ NEA D + ++Q ++ L++NL QA R+K YAD +RSE+ VGD
Sbjct: 1143 PPLINEVAIPGPEDNEARDFLEEKQVMLRRLKENLAQAQTRMKKYADLNRSERQLTVGDM 1202
Query: 1965 VFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPLLK 2144
V+LK+QP+R + L+++LKL++ +YGP+ V++++G VAYRL L EG IHPVFH+ LK
Sbjct: 1203 VYLKMQPYRTTAFGLKQALKLTSIFYGPFRVMQRVGKVAYRLQLPEGVGIHPVFHISQLK 1262
Query: 2145 KRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKATWE 2324
+ + PS +LP+V +G K EP V + R + R +V Q L+QWANL + A+WE
Sbjct: 1263 QHCGANSIPSPELPMVGKDGKIKTEPSLVKETRAMPRNHTLVTQWLVQWANLPPEDASWE 1322
Query: 2325 DKKFIEKKFPSF 2360
D FI+ FP F
Sbjct: 1323 DASFIKSTFPEF 1334
Score = 151 bits (382), Expect = 2e-33
Identities = 79/152 (51%), Positives = 98/152 (64%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
T+ GHYE+LVMPFGL NAPATFQ LMN IF +YLR+F+LVFFDDILIYSK+ EEH HL
Sbjct: 551 TYLGHYEYLVMPFGLTNAPATFQCLMNSIFAQYLRRFILVFFDDILIYSKNDEEHQEHLT 610
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
V LR +QL+ K +KC F ++ Y+GH+IS GVA DP KIS++V+WP P+ L
Sbjct: 611 IVLGLLRQHQLFAKLNKCVFAVSQVTYLGHVISGDGVATDPDKISTIVEWPKPQDLTQLR 670
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSF 456
F + G G P + RK F
Sbjct: 671 SFLGMTGYYRRFIRHYGVICRPLYDMLRKGGF 702
>ref|XP_023156358.1| uncharacterized protein LOC111589729 isoform X1 [Zea mays]
Length = 1567
Score = 684 bits (1766), Expect(2) = 0.0
Identities = 339/697 (48%), Positives = 472/697 (67%), Gaps = 1/697 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
K+ +LRGFLGLTGYYRKF++ YG+L+KPLT+LL++ +F W A+TAF LKDAM+T P
Sbjct: 866 KSHTELRGFLGLTGYYRKFVKGYGILAKPLTVLLQQKQFGWPPSAQTAFEALKDAMITTP 925
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL LP+F++ FV+ETDA TG+GAVL Q+G P+A+ SK L N LS ++EFLA+LMA
Sbjct: 926 VLALPNFSETFVIETDACDTGIGAVLSQKGHPVAFYSKALGVKNSQLSTYEKEFLAILMA 985
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
++KW+ YL F+I+TD ++L +L DQ + T MQ+K +T+L GL + +QYKKG EN+
Sbjct: 986 VEKWRCYLSRGPFVIRTDHRSLCHLQDQTLATDMQKKAMTKLAGLQFSVQYKKGAENKAA 1045
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSR +A++ TP WLQE+ NSY D+ ++A + F ++ G+
Sbjct: 1046 DALSRV-AHNMELSAISATTPVWLQEITNSYELDTHAQSLLAELAVSSPNEQGFELKNGL 1104
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+ RL +G + L++ +++A H S GGHSG+ TY R+K +F W +K DV Q V+
Sbjct: 1105 IYKNNRLVVGQNVGLQTKLISAFHASPLGGHSGIQATYQRVKKLFLWNGLKADVEQFVRQ 1164
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C C+ K ++ YPGLLQPL +P +W+ ++MDFIEGLPKS G +VILVVVDR TKYAH
Sbjct: 1165 CHVCQQAKHEHCKYPGLLQPLPIPQSSWQDLSMDFIEGLPKSNGYSVILVVVDRLTKYAH 1224
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
F+A+ HPF+AS++A LF + +LHG P +IVSDRDK+FTS FW+ELFKL G L +SSA
Sbjct: 1225 FLAVKHPFTASHIAHLFFSQVVKLHGFPHTIVSDRDKVFTSTFWQELFKLSGTQLHLSSA 1284
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHPQSDGQTER+N CLE +LRC VH +P W +WL AE WYNT+YHTS+K + F+ALYG
Sbjct: 1285 YHPQSDGQTERVNQCLEMFLRCAVHNSPSQWAKWLDSAELWYNTSYHTSIKCSPFKALYG 1344
Query: 1779 YPPPLLSIGPYLDS-SINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
P L I P DS + +EA + QRQ ++V++ NL A +R+K YAD +RS + F++
Sbjct: 1345 VEPNLGCI-PVTDSLNPSEAQLTLQQRQEFLEVIKTNLASAQSRMKHYADLNRSFRQFQI 1403
Query: 1956 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 2135
GD V+LKLQPF Q SV+ R KLS +Y+GP+ +++K+G AY+L L E + IHPVFHV
Sbjct: 1404 GDLVYLKLQPFAQVSVAYRPCAKLSFKYFGPFKIVDKVGSAAYKLLLPESANIHPVFHVS 1463
Query: 2136 LLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKA 2315
LK V D T ++LP N P ++LD R+VK+ V Q+LI+W + V+ A
Sbjct: 1464 QLKTHVPDYTPVFTELPPTAFSENVTPNPERILDRRLVKKGSAAVTQILIKWEGIPVEMA 1523
Query: 2316 TWEDKKFIEKKFPSFNPWGQGLSPPRGIVMNMAENGQ 2426
+WED ++ +FP+ + WG + G V ++ Q
Sbjct: 1524 SWEDYTVLQSRFPNSSIWGPAGASGGGTVTSVLHQDQ 1560
Score = 157 bits (397), Expect(2) = 0.0
Identities = 72/114 (63%), Positives = 88/114 (77%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH+GH++F VMPFGL NAPATFQ LMN +F++ +RK VL+F DDIL+YS S E H++HLQ
Sbjct: 753 THHGHFQFRVMPFGLTNAPATFQCLMNAVFQQLMRKCVLIFMDDILVYSPSLETHVVHLQ 812
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPK 342
QVF L +QLY KRSKC F +IEY+GHIIS GV+ DP K SM +WPTPK
Sbjct: 813 QVFQVLETHQLYAKRSKCAFALTQIEYLGHIISDKGVSTDPSKTESMRRWPTPK 866
>ref|XP_020092846.1| uncharacterized protein LOC109713256 [Ananas comosus]
Length = 1811
Score = 718 bits (1853), Expect = 0.0
Identities = 347/679 (51%), Positives = 470/679 (69%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
K++K+LRGFLGLTGYYRKFI+ YG +SKPLT LL+KD+F W+ E++ AF LK AM TAP
Sbjct: 1057 KSVKELRGFLGLTGYYRKFIQGYGKISKPLTDLLRKDQFCWSEESQLAFEELKTAMTTAP 1116
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL +P+F + F LE DA TG+GAVL Q+ +PIAY+SK + + LS ++EFLA+LMA
Sbjct: 1117 VLAMPNFDRSFTLEVDACDTGIGAVLSQDEKPIAYLSKAIGGKHLGLSTYEKEFLAILMA 1176
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+QKWKHYL F+I+TD ++LKYLL+QR+ TPMQQK + +L+G DY IQY+KG EN
Sbjct: 1177 LQKWKHYLSMRTFVIRTDHESLKYLLEQRVTTPMQQKGMMKLMGFDYTIQYRKGKENAAA 1236
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSR ++ A+T P+W+QEV SY D K+I L T D+ +
Sbjct: 1237 DALSRVTGEKGVTLAITAAIPSWVQEVTESYLGDPQCEKLICELPLQSTNQGDYSYHNEL 1296
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+R+KG+L IG LR ++ MHNSA GGHSG+ TY R+K FYWP +K +V + VK
Sbjct: 1297 LRHKGKLYIGKSGHLREKVIDQMHNSALGGHSGIQNTYRRIKQHFYWPGLKKEVEEWVKG 1356
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C TC NK D + GLLQPL +P Q W+ ++MDFIE LPKS GK+ I+VVVDR TKYAH
Sbjct: 1357 CATCAQNKVDGTPHAGLLQPLPIPHQVWEEVSMDFIEALPKSEGKDAIMVVVDRLTKYAH 1416
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
F++L HPFSA VA+ F+DTIY+LHG P IVSDRDKIFTS FWKELF+ MG L MSSA
Sbjct: 1417 FVSLKHPFSAPVVARTFMDTIYKLHGCPKRIVSDRDKIFTSQFWKELFQSMGTKLQMSSA 1476
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHP++DGQTER+N CLE YLRC+ ++PK W WL+LAE+WYNT++H+S+ T ++ALYG
Sbjct: 1477 YHPETDGQTERVNRCLETYLRCLCFQHPKKWHSWLALAEWWYNTSFHSSIGMTPYEALYG 1536
Query: 1779 YPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVG 1958
YPPP + S+ E + +R+ LRD L A +R+K D+HR EK + +G
Sbjct: 1537 YPPPNYLVTSITSSTSPEFREWAKEREGLTHELRDRLQVARSRMKQQVDRHRKEKEYAIG 1596
Query: 1959 DQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPL 2138
D V+LKLQP+RQ +V++R++LKL+ARYYGP+ ++E+IG VAY+L L EGS++HPVFHV L
Sbjct: 1597 DWVYLKLQPYRQTTVAIRRNLKLAARYYGPFQIMERIGPVAYKLQLPEGSRVHPVFHVSL 1656
Query: 2139 LKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKAT 2318
LKK S ++P + + EP ++L+ R+V+R V +VL++W ++ +
Sbjct: 1657 LKKSSPAAVPASPNVPTLREDDELLTEPEKILERRMVQRGNKAVTEVLVKWGAEEHEQVS 1716
Query: 2319 WEDKKFIEKKFPSFNPWGQ 2375
+D+ + +PWG+
Sbjct: 1717 HDDRD------GAGSPWGK 1729
Score = 169 bits (427), Expect = 1e-38
Identities = 82/130 (63%), Positives = 96/130 (73%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GHYEF VMPFGL NAPATFQ++MN F YLRKF+LVFFDDIL+YSKS E+H+ HL+
Sbjct: 944 THQGHYEFRVMPFGLTNAPATFQAIMNCTFEPYLRKFILVFFDDILVYSKSLEDHVKHLR 1003
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
LR NQLY KRSKC FGQ ++EY+GHIIS GVA DP KI +M+ WPTPK +
Sbjct: 1004 ITLEELRRNQLYAKRSKCYFGQDQVEYLGHIISAEGVATDPTKIEAMINWPTPKSVKELR 1063
Query: 361 DF*VLQGITG 390
F G+TG
Sbjct: 1064 GF---LGLTG 1070
>dbj|BAF19594.2| Os06g0493000 [Oryza sativa Japonica Group]
Length = 866
Score = 689 bits (1778), Expect = 0.0
Identities = 342/677 (50%), Positives = 455/677 (67%), Gaps = 2/677 (0%)
Frame = +3
Query: 342 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 521
++ +LRGFLGL GYYR+FI+N+G++ +P+ LKK+ F W + AF +K + APV
Sbjct: 194 SITELRGFLGLAGYYRRFIKNFGIICRPMFDALKKNNFHWQEVQQQAFDAIKLQLAQAPV 253
Query: 522 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 701
L +PDF+ PF+LE DASG G+GAVLMQ GRP+AY+SK + P ALS +E LA+L A+
Sbjct: 254 LAMPDFSLPFILEADASGHGIGAVLMQNGRPLAYLSKAIGPKAAALSTYDKEALAILEAL 313
Query: 702 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 881
+KWKHY G +I+TDQ +LKY+ +QRI +Q K + +LL DY+I+YKKG EN+ D
Sbjct: 314 KKWKHYFLGTSLIIRTDQASLKYINEQRITEGVQHKLLIKLLSYDYKIEYKKGQENKAAD 373
Query: 882 TLSRRDVKEDNCNALTT--ITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGG 1055
LSR NALTT I P W+ EV SY+ D ++ + + P ++P + ++GG
Sbjct: 374 ALSRMQ----QLNALTTTVIVPQWITEVAASYSTDPKCHELESHLHIAPQSHPPYTLKGG 429
Query: 1056 IVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVK 1235
I+RYK + +G+ LR +L + H+SA GGHSG TY R+K +FYWP MK V Q VK
Sbjct: 430 ILRYKDHIVVGAGNTLREQLLVSFHDSALGGHSGERATYQRMKQLFYWPGMKLAVTQFVK 489
Query: 1236 SCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYA 1415
+C C+ NK +++ GLLQPL +P AW HITMDF+EGLPKS GK+VI V+VDRFTKYA
Sbjct: 490 ACPVCQKNKTEHNMPAGLLQPLPLPEMAWSHITMDFVEGLPKSEGKDVIWVIVDRFTKYA 549
Query: 1416 HFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSS 1595
HF+ LSHPF+A + FL+ Y+LHGLP IVSDRD+IFTS+ WKE+F+ GV L SS
Sbjct: 550 HFIPLSHPFTADQILTQFLEHFYKLHGLPTVIVSDRDRIFTSSTWKEVFEKAGVKLHFSS 609
Query: 1596 AYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALY 1775
AYHPQ+DGQ+ER+N CLENYLRCM P+ W L AE+WYNT +HTSL + +QAL+
Sbjct: 610 AYHPQTDGQSERVNQCLENYLRCMTSSKPRKWKALLPHAEWWYNTTFHTSLGMSPYQALH 669
Query: 1776 GYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
G PPLL+ S + + + ++ ++ +L++A R+K +AD+HR E++ EV
Sbjct: 670 GIKPPLLAELLLPGSLLEGERNKQEAKAALLETIKSHLVKAQARMKYFADQHRQERTLEV 729
Query: 1956 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 2135
GD V+LK+QP+R NS+ L SLKL +RYYGP+ VLE+IG VAY+L L S+IH VFHV
Sbjct: 730 GDMVYLKMQPYRHNSLGLHSSLKLHSRYYGPFRVLERIGSVAYKLLLPVTSQIHHVFHVS 789
Query: 2136 LLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKA 2315
LKK + P LPL+D+EG PL VLD R++ R V Q I WANL A
Sbjct: 790 QLKKHLGSRAVPEQGLPLIDAEGRILSTPLAVLDRRLIPRNNEPVVQWKIHWANLPESAA 849
Query: 2316 TWEDKKFIEKKFPSFNP 2366
TWED FI K FPSF P
Sbjct: 850 TWEDAAFITKVFPSFTP 866
Score = 157 bits (397), Expect = 2e-35
Identities = 81/153 (52%), Positives = 100/153 (65%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GH+E+LVMPFGL NAPATFQ+LMN+I YLRKFVLVFFDDILIYSKS EH HL
Sbjct: 80 THLGHFEYLVMPFGLTNAPATFQALMNKILAPYLRKFVLVFFDDILIYSKSATEHAQHLS 139
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
V LR++QL+ K SKC FGQ ++EY+G+IIS GVA DP K+ ++ WPTP +
Sbjct: 140 LVLQLLRHHQLFAKPSKCVFGQDQVEYLGYIISSSGVATDPVKVQAVQNWPTPTSITELR 199
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSFY 459
F L G + G P +K +F+
Sbjct: 200 GFLGLAGYYRRFIKNFGIICRPMFDALKKNNFH 232
>emb|CAE05990.1| OSJNBa0004L19.22 [Oryza sativa Japonica Group]
Length = 1586
Score = 710 bits (1832), Expect = 0.0
Identities = 335/676 (49%), Positives = 471/676 (69%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
K++ LR FLG+TGYYR+FI+NYG++ +PL +LKK+ F W E AF TLK M T+P
Sbjct: 912 KSVTDLRKFLGMTGYYRRFIKNYGIVCRPLHDMLKKEGFQWEREQTEAFETLKTHMCTSP 971
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL+LPDFTK FV+E DA G G+GAVLMQ GRP+AY SK L P A SI ++E +A+L A
Sbjct: 972 VLSLPDFTKEFVIEADACGNGIGAVLMQSGRPLAYFSKTLGPKAAAQSIYEKEAMAILEA 1031
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
++KW+HY+ G + +IKTDQQ+LK++++QR++ +Q K + +L+ DY I+YK G EN V
Sbjct: 1032 LKKWRHYVLGSRLIIKTDQQSLKFMMNQRLVEGIQHKLLLKLMEYDYSIEYKAGKENLVA 1091
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSR E C A+TT+ P W++++ SY D K+++ + T + G+
Sbjct: 1092 DALSRIPPAEQ-CQAITTVIPEWVRDIQRSYEGDVQAHKILSLIGTEGDTDGSYSQEAGL 1150
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+RYKGR+ +G + ++R ++ + H+SA+GGHSG+ TY R+K +FYWP +K V ++
Sbjct: 1151 LRYKGRIYVGENTEIREELIRSYHSSAFGGHSGMRATYHRIKSLFYWPGLKKAVEGFIRE 1210
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C C++ K ++ PGLL PL VP AW HITMDF+EGLPKS GK+VILVVVDR TKYAH
Sbjct: 1211 CPICQVTKAEHIHIPGLLDPLEVPDMAWAHITMDFVEGLPKSNGKDVILVVVDRLTKYAH 1270
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
F+A++HP++ V +LF++ I+RLHG+P++I++DRD+IFTS ++E+FK M V L S++
Sbjct: 1271 FIAMAHPYTVEQVVELFMNNIHRLHGMPMAIITDRDRIFTSQLFQEIFKSMKVRLKFSTS 1330
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHPQ+DGQTER+N CLE+YLR M + P W WL+LAE+WYNT YHTS++ T FQALYG
Sbjct: 1331 YHPQTDGQTERVNQCLESYLRSMTFQEPTRWHSWLALAEWWYNTTYHTSIQMTPFQALYG 1390
Query: 1779 YPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVG 1958
YPPP ++ + EA + Q+ +Q L+ +L +A R+K YAD++RSE++ VG
Sbjct: 1391 YPPPQINEFSVPCNVSEEARVTIEQKDAIIQKLKYSLTEAQRRIKHYADRNRSERTLAVG 1450
Query: 1959 DQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPL 2138
D V+LKLQP+RQ + +R SLKL +++YGP+ ++EK+G VAY+L L EGS IHPVFHV
Sbjct: 1451 DMVYLKLQPYRQTAFGIRGSLKLRSKFYGPFKIMEKVGRVAYKLQLPEGSNIHPVFHVSQ 1510
Query: 2139 LKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKAT 2318
LKK + P ++LP V +G K EP+ VL R++ R V Q L+ W NL +AT
Sbjct: 1511 LKKHIGSRAVPMANLPSVGPDGQIKTEPVAVLKRRMIPRGGVAVTQWLVLWHNLSPSEAT 1570
Query: 2319 WEDKKFIEKKFPSFNP 2366
WED I+ FPSFNP
Sbjct: 1571 WEDASMIQSMFPSFNP 1586
Score = 154 bits (389), Expect = 4e-34
Identities = 77/152 (50%), Positives = 94/152 (61%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GHYE+ VMPFGL NAP TFQSLMNQ+ +LRK+VLVFFDDILIYSK W EH H++
Sbjct: 799 THLGHYEYQVMPFGLTNAPTTFQSLMNQVLAPFLRKYVLVFFDDILIYSKDWAEHKEHIR 858
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
QV L N+L VK KC FG + Y+GHIIS GVA DP+K+ + +PTPK +
Sbjct: 859 QVMKVLEENKLVVKLKKCAFGLPSVTYLGHIISQDGVATDPKKVEKIATYPTPKSVTDLR 918
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSF 456
F + G + G P H +K F
Sbjct: 919 KFLGMTGYYRRFIKNYGIVCRPLHDMLKKEGF 950
>gb|PNY00055.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1005
Score = 691 bits (1782), Expect = 0.0
Identities = 346/679 (50%), Positives = 473/679 (69%), Gaps = 3/679 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
+ LKQLRGFLGL GYYR+F+R++G ++KPLT LLKKD F+W+ EA AF TLK A+V+AP
Sbjct: 332 QNLKQLRGFLGLAGYYRRFVRDFGKIAKPLTDLLKKDSFIWSAEATQAFTTLKQALVSAP 391
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL LPDF+K F++ETDASG G+GAVLMQ PIAY+SK+L P QA+S+ +RE LA++ A
Sbjct: 392 VLCLPDFSKKFIVETDASGKGIGAVLMQNQHPIAYISKSLGPKQQAMSVYERELLAIVYA 451
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+QKW YL F+IKTDQ+++K++LDQ++ TP QQ W+ +LLG D+EIQYK+G+ N
Sbjct: 452 VQKWGSYLSHAPFIIKTDQKSIKHMLDQKLNTPFQQVWVAKLLGFDFEIQYKEGSSNLAA 511
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSR+ E L+ + + + ++ D+ +I DP ++ F
Sbjct: 512 DALSRKVGAELLPLILSNASDDLWESINLAWQQDTHLKAIIHDLKKDPKSHSKFSWIRDE 571
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+R +G+L IGS+P ++ IL +H+SA GGHSG + T R+K +FYW M D+I VK+
Sbjct: 572 LRRRGKLVIGSNPTIKETILTWLHSSAIGGHSGRDVTTSRVKSLFYWKGMNKDIITFVKN 631
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C C+ NKPD A PGLLQPL +P Q W HI+MDF+EGLP S GK VI VVVDR +KYAH
Sbjct: 632 CAICQKNKPDLAASPGLLQPLPIPNQIWTHISMDFVEGLPTSVGKQVIFVVVDRLSKYAH 691
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
FMALSHP++AS+VA+LFLD +++LHGLP SI+SDRD IF S+FW + FKL GV+L+ SSA
Sbjct: 692 FMALSHPYTASDVAQLFLDNVFKLHGLPESIISDRDPIFISSFWNDFFKLQGVALNKSSA 751
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHPQSDGQTE +N CLE YLRCM + P WF+WLSLAE+WYN+NYH+S+ TT F+ +YG
Sbjct: 752 YHPQSDGQTEVVNKCLETYLRCMCSDRPTQWFKWLSLAEWWYNSNYHSSIHTTPFEVVYG 811
Query: 1779 YPPPLLSIGPYLDSSINEA---HDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSF 1949
PPP+ PYL S A L++ R+ A+++L+ +L++A NR+ A+KHRS++ F
Sbjct: 812 QPPPIHL--PYLPGSSATASVDRSLIA-REEAIKLLKFHLLRAQNRMTQQANKHRSDRVF 868
Query: 1950 EVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFH 2129
+GD V+LKLQP+RQ S+ KL ++YGP+ VL++IG AY+L+L + IH VFH
Sbjct: 869 AIGDYVYLKLQPYRQLSMKSHGFHKLLPKFYGPFPVLDRIGSTAYQLELPPSAAIHNVFH 928
Query: 2130 VPLLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVD 2309
V LK + P +P S + P+ +LD ++VKR +VL+QW +L +D
Sbjct: 929 VSQLKLCPNPQGMPIQHIPA--SLSHETRIPIAILDRKMVKRGNRAATKVLVQWKDLPMD 986
Query: 2310 KATWEDKKFIEKKFPSFNP 2366
KATWE + KKFP+F+P
Sbjct: 987 KATWEFYYDLLKKFPNFHP 1005
Score = 160 bits (405), Expect = 3e-36
Identities = 78/152 (51%), Positives = 103/152 (67%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH+GH+E+LVMPFGL NAPA+FQSLMNQ+F +LRKFV+VFFDD+LIYS+S E+H +HLQ
Sbjct: 219 THSGHFEYLVMPFGLTNAPASFQSLMNQVFSPFLRKFVIVFFDDLLIYSQSLEDHQVHLQ 278
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
+F T+R+N L++ +SKCNF +EY+GH I+ GV+ DP KI ++ WP P+ L
Sbjct: 279 LIFQTIRDNHLFLNKSKCNFALPRVEYLGHFITREGVSTDPLKIQAVSSWPIPQNLKQLR 338
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSF 456
F L G G A P +K SF
Sbjct: 339 GFLGLAGYYRRFVRDFGKIAKPLTDLLKKDSF 370
>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1611
Score = 707 bits (1826), Expect = 0.0
Identities = 334/677 (49%), Positives = 470/677 (69%), Gaps = 1/677 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
K + ++R FLG+ GYYR+FI+ YGV+ +PL LLKKD F W + AF LK+ M +P
Sbjct: 935 KNVTEVREFLGMAGYYRRFIKGYGVICRPLHDLLKKDGFKWGDTQQEAFELLKEKMCNSP 994
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL LPDF++PFV+ETDA G G+GAVLMQ+GRP+AY SK L P A S+ ++E +A+L A
Sbjct: 995 VLALPDFSQPFVIETDACGIGIGAVLMQKGRPLAYFSKALGPKAAAQSVYEKEAIAILEA 1054
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
++KW+HY+ G +IKTDQQ+LK+++ QR++ +Q K + +L+ DY I+YK G EN V
Sbjct: 1055 LKKWRHYILGGSLIIKTDQQSLKFMMSQRLVEGIQHKLLLKLMEFDYVIEYKSGKENLVA 1114
Query: 879 DTLSRR-DVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGG 1055
D LSR ++KE+ C +T + P W+Q++ SY D F K+++ D + + G
Sbjct: 1115 DALSRSPNLKEEQCLPITVVVPEWVQDIKRSYEEDIFAHKILSLIETDGDPERHYKLESG 1174
Query: 1056 IVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVK 1235
+++YKGR+ +G ++R ++L A H S +GGHSG+ TY R+K +FYWP +K V ++
Sbjct: 1175 LLKYKGRIYVGETTEIRMLLLEAYHASYFGGHSGIRATYHRIKQLFYWPGLKKQVEHYIR 1234
Query: 1236 SCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYA 1415
C TC++ K ++ PGLL PL VP AW HITMDFIEGLPKS GK+VILVVVDR TKYA
Sbjct: 1235 ECPTCQITKAEHIHIPGLLNPLEVPDMAWTHITMDFIEGLPKSQGKDVILVVVDRLTKYA 1294
Query: 1416 HFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSS 1595
HF+ALSHP++ V ++F+D I++LHG+P+ IV+DRD++FTSNF++E+FK V L S+
Sbjct: 1295 HFLALSHPYTVEQVVQIFMDNIHKLHGMPMVIVTDRDRVFTSNFFQEIFKTQKVKLRFST 1354
Query: 1596 AYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALY 1775
A+HPQ+DGQTER+N CLE+YLR M + P+ WF WL+LAE+WYNT YHTS++ T FQALY
Sbjct: 1355 AHHPQTDGQTERVNQCLESYLRSMTFQEPQKWFSWLALAEWWYNTTYHTSIQMTPFQALY 1414
Query: 1776 GYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
GYPPP ++ + EA + + +Q L+ ++ +A R+K YADK RSE++ E+
Sbjct: 1415 GYPPPQITEFAIPCNMSEEARVTLEDKALILQKLKSSIGEAQRRIKFYADKGRSERTLEL 1474
Query: 1956 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 2135
GD V+LKLQP+RQ ++ +R SLKL ++YYGP+ V+EK+G VAY+L L +G+ IHPVFHV
Sbjct: 1475 GDMVYLKLQPYRQVAMGIRGSLKLRSKYYGPFKVIEKMGAVAYKLQLPDGAGIHPVFHVS 1534
Query: 2136 LLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKA 2315
LKK + P +LP + +G K EP VL R++ R V Q LI W NL +A
Sbjct: 1535 QLKKHLGARAIPMPNLPAIGPDGQIKTEPAAVLQRRMIPRHNEPVTQWLILWENLTPAEA 1594
Query: 2316 TWEDKKFIEKKFPSFNP 2366
TWED +I+ FP+F P
Sbjct: 1595 TWEDASYIQAAFPNFQP 1611
Score = 140 bits (354), Expect = 5e-30
Identities = 75/152 (49%), Positives = 93/152 (61%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GHYE+ VMPFGL NAPATFQ+LMNQ+ +LRKFVLVFF DILIYSK+ EHL H++
Sbjct: 822 THLGHYEYNVMPFGLTNAPATFQALMNQVLAPFLRKFVLVFFADILIYSKTQSEHLEHIK 881
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
V L NQL V+ KC FG + Y+GHIIS GV+ DP+KIS + PK +
Sbjct: 882 LVMQALSANQLVVRLKKCEFGLDRVSYLGHIISSEGVSTDPKKISDIKNRKPPKNVTEVR 941
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSF 456
+F + G + G P H +K F
Sbjct: 942 EFLGMAGYYRRFIKGYGVICRPLHDLLKKDGF 973
>gb|PKA46982.1| putative mitochondrial protein [Apostasia shenzhenica]
Length = 1535
Score = 667 bits (1720), Expect(2) = 0.0
Identities = 334/677 (49%), Positives = 459/677 (67%), Gaps = 4/677 (0%)
Frame = +3
Query: 342 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 521
++++LRGFLGL GYYR+FI++YG +S+ LT LLKKD F W +AE +F LK + PV
Sbjct: 848 SVRELRGFLGLAGYYRRFIKDYGKISRGLTELLKKDAFKWDSQAEVSFSQLKQQLSQPPV 907
Query: 522 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 701
L LPDFT+PFV+ETDA G G+GAVLMQ GRPIAY SK L +Q L + +E LA++ AI
Sbjct: 908 LALPDFTQPFVVETDACGAGIGAVLMQSGRPIAYFSKGLSTKHQQLPVYDKEMLAIVAAI 967
Query: 702 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 881
QKW+ YL G+ F +KTD Q+L++LL+QRI TP QQKW+++L G D+EI Y+KG EN D
Sbjct: 968 QKWRPYLLGNHFKVKTDHQSLRFLLEQRITTPTQQKWLSKLAGYDFEIIYRKGQENIAAD 1027
Query: 882 TLSRR-DVKEDNCNALTTITPT-WLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGG 1055
LSRR NA+ PT L V NS+ D+ +I T + +
Sbjct: 1028 ALSRRTQTASITLNAVLEGMPTELLNGVRNSWNLDAKLLDIIRQLQNKITVNKPYTWQNN 1087
Query: 1056 IVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVK 1235
++R+KG+L IGSD LR ++ +H + GGHSG T +LK +F+W M ++
Sbjct: 1088 LLRWKGKLVIGSDFALRQQLIQMIHMGSMGGHSGFIPTLHKLKSMFHWKGMGKATKIFIQ 1147
Query: 1236 SCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYA 1415
C+ C+ NK + + G LQPL +P + W +++MDFIEGLPKS GK+ I VVVDR +KYA
Sbjct: 1148 ECNVCQQNKYETSSKSGPLQPLPIPEKVWTNVSMDFIEGLPKSNGKDTIFVVVDRLSKYA 1207
Query: 1416 HFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSS 1595
HFMAL+HPFSA+ VA+ +LD +Y+LHG+P IVSDRDKIF S FW+EL KL+ V + MS+
Sbjct: 1208 HFMALAHPFSATTVAQAYLDNVYKLHGMPEKIVSDRDKIFLSRFWQELLKLLKVQVQMST 1267
Query: 1596 AYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALY 1775
AYHPQ+DGQTE +N CLE YLRCM E PK W +WL L+E+WYNTNYH+SLK + ++ LY
Sbjct: 1268 AYHPQTDGQTEVVNRCLETYLRCMTVERPKEWLKWLPLSEWWYNTNYHSSLKCSPYEVLY 1327
Query: 1776 GYPPPLLSIGPYLDSS--INEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSF 1949
G PPL PYL + ++ + R+ +++L+ +L+QA NR+K ADKHR E+ F
Sbjct: 1328 GQKPPLHV--PYLAGTAVVDAVDRSLQSRENFIKLLKHHLLQAMNRMKVQADKHRKEREF 1385
Query: 1950 EVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFH 2129
EVGD V++KLQP+RQ+SVS R S KL+ +Y+GP+ +L K+G VAY+L L + +KIHPVFH
Sbjct: 1386 EVGDLVYVKLQPYRQDSVSHRMSRKLAPKYFGPFEILAKVGTVAYKLKLPDDAKIHPVFH 1445
Query: 2130 VPLLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVD 2309
V +LKK +S+ + + G K EP+ +L R + RK++ + QVLIQW+N +
Sbjct: 1446 VSILKKSISNRPIEEVFPSELTTFGQLKAEPVAILKRRTILRKRHFLEQVLIQWSNTSPE 1505
Query: 2310 KATWEDKKFIEKKFPSF 2360
A+WED + I ++P F
Sbjct: 1506 DASWEDLETICSQYPHF 1522
Score = 156 bits (395), Expect(2) = 0.0
Identities = 72/113 (63%), Positives = 86/113 (76%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GHYEFLVMPFGL NAP TFQ LMN IF+ YLR FVLVFFDDIL+YS++W+EHL HL+
Sbjct: 734 THEGHYEFLVMPFGLTNAPVTFQKLMNSIFKPYLRIFVLVFFDDILVYSRTWDEHLHHLK 793
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 339
V L + L VKR+KC+F IEY+GH IS GV+ DP KI ++V+WP P
Sbjct: 794 TVLDVLATHSLKVKRNKCDFAVQSIEYLGHCISSRGVSTDPNKIRAIVEWPKP 846
>gb|ABA95319.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 955
Score = 678 bits (1750), Expect = 0.0
Identities = 323/680 (47%), Positives = 461/680 (67%), Gaps = 4/680 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
K + ++R FLG+TGYYR+FI+ YG++ +PL +LKK F W AF LK + T+P
Sbjct: 276 KNVTEVREFLGMTGYYRRFIKGYGLICRPLHDMLKKGGFNWGLAQSEAFTELKGKLCTSP 335
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL LP+F +PFV+E DA G+GAVLMQ GRPIAY SK L P A SI ++E +A+L A
Sbjct: 336 VLALPNFEQPFVIEADACEVGIGAVLMQAGRPIAYYSKALGPKAAAQSIYEKEAMAILEA 395
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+++W+HY+ G + +IKTDQQ+LKY+++QR++ +Q K + +L+ +Y I+YK G EN V
Sbjct: 396 LKRWRHYVLGGELVIKTDQQSLKYMMNQRLVEGIQHKLLLKLMEYNYTIEYKAGRENLVA 455
Query: 879 DTLSRRDVKEDN----CNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIV 1046
D LSR ++ C A+ + P W+ ++ SY D K+++ ++
Sbjct: 456 DALSRSPKNKEEVTELCAAIAVVVPEWILDIKRSYEEDVQAHKLLSLIGTAGDPEGEYKF 515
Query: 1047 RGGIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQ 1226
GI++YKGR+ +G ++R ++ A H+S +GGH G+ TY R+K +FYWP +K V
Sbjct: 516 EAGIMKYKGRIYVGETGEIRGQLIQAYHSSTFGGHCGIRATYQRIKKLFYWPGLKKGVEN 575
Query: 1227 LVKSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFT 1406
+++C C++ K ++ PGLL PL VP AW HI+MDF+EGLPKS GK+VILVVVDR T
Sbjct: 576 HIRNCPVCQVTKSEHVHIPGLLNPLEVPDMAWTHISMDFVEGLPKSKGKDVILVVVDRLT 635
Query: 1407 KYAHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLD 1586
KYAHF+ALSHP++ V ++F+D I++LHG+P++IV+DRD++FTS F++E+FK V L
Sbjct: 636 KYAHFIALSHPYTVEEVVQVFMDNIHKLHGMPIAIVTDRDRVFTSTFFQEVFKSQKVQLR 695
Query: 1587 MSSAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQ 1766
S+AYHPQ+DGQTER+N CLE+YLRCM + P++W W++LAE+WYNT YHT+++ T F+
Sbjct: 696 FSTAYHPQTDGQTERVNQCLESYLRCMTFQEPQNWCSWIALAEWWYNTTYHTAIQMTPFK 755
Query: 1767 ALYGYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKS 1946
ALYGY PP +S EA + +++ VQ L+ ++ A R+K YAD++R+E+
Sbjct: 756 ALYGYSPPQISEFSVPCDVSQEARVTLEEKETIVQKLKASMEDAQRRMKYYADRNRTERK 815
Query: 1947 FEVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVF 2126
EVGD V+LKLQP+RQN+ +R SLKL +YYGP+ VLEK+G VAYRL L E + IHPVF
Sbjct: 816 LEVGDMVYLKLQPYRQNAFGIRGSLKLRGKYYGPFKVLEKVGAVAYRLQLPEEAAIHPVF 875
Query: 2127 HVPLLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGV 2306
HV LKK + P +LP V +G K EP+ VL R++ R V Q LI W+NL
Sbjct: 876 HVSQLKKHLGTHAVPMPNLPAVGPDGQIKTEPVAVLQRRMIPRNNVAVTQWLILWSNLTP 935
Query: 2307 DKATWEDKKFIEKKFPSFNP 2366
+ATWED +I+K FP+F P
Sbjct: 936 AEATWEDASYIQKVFPNFQP 955
Score = 144 bits (363), Expect = 3e-31
Identities = 76/152 (50%), Positives = 93/152 (61%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GHYE+ VMPFGL NAPATFQSLMNQ +LRKFVLVFF DILIYSK+ EEH+ H++
Sbjct: 163 THMGHYEYQVMPFGLTNAPATFQSLMNQALAPFLRKFVLVFFYDILIYSKTREEHIKHIK 222
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
V L NQL V+ KC FG + Y+GH+IS GVA DP KIS ++ PK +
Sbjct: 223 AVLQVLEKNQLVVRLKKCAFGLSSVAYLGHVISSDGVATDPSKISDIMNRKEPKNVTEVR 282
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSF 456
+F + G + G P H +K F
Sbjct: 283 EFLGMTGYYRRFIKGYGLICRPLHDMLKKGGF 314
>emb|CAE03590.1| OSJNBa0087O24.13 [Oryza sativa Japonica Group]
Length = 1311
Score = 689 bits (1779), Expect = 0.0
Identities = 336/676 (49%), Positives = 449/676 (66%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
K++ L GFLGL GYYRKFI+++G++ KPL LKK F W E + AF T+KD + AP
Sbjct: 637 KSVTDLSGFLGLAGYYRKFIKDFGLICKPLFTALKKTGFTWQDEQQQAFATIKDKLAHAP 696
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL +P+FT+PF+LE DASGTG+GAVLMQ RP+AY SK + P LS +E LA+L A
Sbjct: 697 VLAMPNFTQPFILEADASGTGLGAVLMQNNRPLAYFSKAIGPKAAGLSTYDKEALAILEA 756
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
++KWKHY G +I+TDQ +LKY+ +QR+ +Q K + +LL DY+I+YKKG EN+
Sbjct: 757 LKKWKHYFLGTSLIIRTDQASLKYINEQRLTEGIQHKLLIKLLSYDYKIEYKKGKENKAA 816
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSR + T I PTW+ E++ SYA D + + + P +P + + GI
Sbjct: 817 DALSRIP-SVAQLFSTTIIVPTWITEILASYATDPKCTALESQLRITPQGHPPYTLTSGI 875
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+RYK RL +G+ LR+ + + H+SA GGHSG TY R K +FYWP MK D+ VK
Sbjct: 876 LRYKNRLYVGAGTDLRAKLQQSFHDSALGGHSGERATYQRAKLLFYWPGMKKDIASYVKL 935
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C C+ NK +++ PGLL PL +P AW HI+MDFIEGLPKS K+VI V+VDRFTKYAH
Sbjct: 936 CPVCQKNKSEHNLQPGLLHPLPIPEMAWTHISMDFIEGLPKSDNKDVIWVIVDRFTKYAH 995
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
F+ALSHPF+A + F++ Y+ HGLP IVSDRD+IFTS WK++F+ GV L SSA
Sbjct: 996 FVALSHPFTADQIVTQFVENYYKHHGLPAVIVSDRDRIFTSQTWKDVFEKAGVKLHFSSA 1055
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHPQ+DGQTER+N CLENYLRCM PK W L+ A++WYNT++HT+L T +QAL+G
Sbjct: 1056 YHPQTDGQTERVNQCLENYLRCMTFTKPKKWKSLLAYAKWWYNTSFHTTLGMTPYQALHG 1115
Query: 1779 YPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVG 1958
PPPLL+ S +A + + ++ +L++A R+K +AD +R+E+ VG
Sbjct: 1116 VPPPLLAESFLSPSLFTDARNKAEAKSVITAAIKSSLLKAQARMKHFADMNRTERVLTVG 1175
Query: 1959 DQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPL 2138
D V+LK+QP+R NS+ L SLKL ++YYGP+ VLE+IG VAY+L L S+IHPVFHV
Sbjct: 1176 DMVYLKMQPYRHNSLGLHSSLKLHSKYYGPFRVLERIGSVAYKLLLPASSQIHPVFHVSQ 1235
Query: 2139 LKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKAT 2318
LKK + P LPL D GN +P VL+ R++ + V Q +QWANL + AT
Sbjct: 1236 LKKHIGPKVVPEPGLPLTDDNGNILSQPTAVLERRLIPQNNAPVVQWKVQWANLPLSAAT 1295
Query: 2319 WEDKKFIEKKFPSFNP 2366
WED FI K FP+FNP
Sbjct: 1296 WEDAAFISKVFPAFNP 1311
Score = 157 bits (396), Expect = 5e-35
Identities = 79/152 (51%), Positives = 99/152 (65%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GH+E+LVMPFGL NAPATFQ+LMN I YLRKFVLVFFDDILIYS S +H+ H++
Sbjct: 524 THMGHFEYLVMPFGLTNAPATFQALMNSILAPYLRKFVLVFFDDILIYSPSLSDHVTHVE 583
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
V LR + L K SKC FGQ ++EY+G+IIS+ GVAIDP K+ ++ WP PK +
Sbjct: 584 LVLQLLRQHHLSAKPSKCVFGQSQVEYLGYIISNAGVAIDPTKVQAVKNWPVPKSVTDLS 643
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSF 456
F L G + G P + +KT F
Sbjct: 644 GFLGLAGYYRKFIKDFGLICKPLFTALKKTGF 675
>gb|PKA61698.1| putative mitochondrial protein [Apostasia shenzhenica]
Length = 1390
Score = 689 bits (1777), Expect = 0.0
Identities = 342/677 (50%), Positives = 468/677 (69%), Gaps = 2/677 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
K++K+LRGFLGLTGYYR+FI+NYG +KPLT LLK + F W+ EA AF LK A+ + P
Sbjct: 713 KSVKELRGFLGLTGYYRRFIQNYGQKAKPLTALLKLNGFQWSEEANAAFEQLKMAVTSPP 772
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL LP+F+K F+LETDASG G+GAVLMQEGRPIAY SK L N LSI ++E LA++ A
Sbjct: 773 VLALPNFSKEFLLETDASGNGIGAVLMQEGRPIAYFSKALSGKNLLLSIYEKEMLAIVAA 832
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
IQKW+HYL G F I+TDQ++LKYL++QRI TP QQKWI +L+G DYEI +K+G +N+V
Sbjct: 833 IQKWRHYLVGVHFKIRTDQESLKYLMEQRISTPAQQKWIARLIGYDYEITFKRGVDNKVA 892
Query: 879 DTLSRRDVKEDNCNA--LTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRG 1052
D LSRR + I+ +Q + S+ DS ++I+ ++P + +
Sbjct: 893 DALSRRTFSSAAIQGHIVQGISTNLMQRIQQSWQTDSKLQQLISDLQINPVL--PYSWKN 950
Query: 1053 GIVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLV 1232
+R KG+L +GSD +LR I+ MH A GGHSG T R+K VF+W + V ++
Sbjct: 951 QQLRRKGKLVVGSDSELRFHIVQMMHADATGGHSGAYATMKRIKTVFHWRGINKLVRAMI 1010
Query: 1233 KSCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKY 1412
K C+ C+ +K D AYPG LQPL +P +AW I+MDFIEGLP S G+N+ILVVVDR TKY
Sbjct: 1011 KQCEVCQRSKYDASAYPGFLQPLPIPNKAWSDISMDFIEGLPPSNGRNIILVVVDRLTKY 1070
Query: 1413 AHFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMS 1592
AHF+ALSHP+SA VA++FLD +++LHG+P +IVSDRD +F S FWK+ +L GV+ MS
Sbjct: 1071 AHFIALSHPYSALEVAQIFLDNVFKLHGMPTTIVSDRDPVFISKFWKDFLRLQGVAQHMS 1130
Query: 1593 SAYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQAL 1772
+AYHPQ+DGQTE +N CLE YLRCM HE PK W RWL LAE+WYNTNYH+S++ + ++AL
Sbjct: 1131 TAYHPQTDGQTEVVNRCLETYLRCMTHERPKQWVRWLPLAEWWYNTNYHSSIRMSPYEAL 1190
Query: 1773 YGYPPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFE 1952
YG PL +S ++ +S + A +L+ NL A NR++ A++ RSE + E
Sbjct: 1191 YGQSAPLSVPYTTGESEVDAVDRSLSAHETARIMLKKNLEIAQNRMRQLANRKRSECTLE 1250
Query: 1953 VGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHV 2132
V D V++KL+P+RQ+S++ R S KLS RY+ P+ V+EKIG VAY+L L EGSKIH VFH+
Sbjct: 1251 VTDWVYVKLKPYRQDSIAHRVSHKLSPRYFSPFQVIEKIGSVAYKLKLPEGSKIHAVFHI 1310
Query: 2133 PLLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDK 2312
+LKK V + S +++ G +EP+ +LD R++K+K + Q+LIQW+N +
Sbjct: 1311 SMLKKHVGNHPAEGSFPSMLNDHGQVVLEPIAILDRRLIKKKNRIQVQLLIQWSNASKED 1370
Query: 2313 ATWEDKKFIEKKFPSFN 2363
ATW + + + + FP FN
Sbjct: 1371 ATWMNVEVMRQNFPQFN 1387
Score = 160 bits (406), Expect = 3e-36
Identities = 78/130 (60%), Positives = 94/130 (72%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GHYEFLVMPFGL NAP+TFQSLMN++F+ YLRKF+LVFF DIL+YS W HL HL+
Sbjct: 600 THQGHYEFLVMPFGLTNAPSTFQSLMNEVFQPYLRKFILVFFYDILVYSADWISHLHHLE 659
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
VFL LR + L VKRSKC FG ++ Y+GHIIS GV DP+K+ +M WP PK +
Sbjct: 660 TVFLLLRTHHLNVKRSKCLFGVNKVNYLGHIISAEGVEADPEKLEAMKLWPLPKSVKELR 719
Query: 361 DF*VLQGITG 390
F G+TG
Sbjct: 720 GF---LGLTG 726
>gb|PNX92532.1| retrotransposon-related protein [Trifolium pratense]
Length = 1472
Score = 689 bits (1778), Expect = 0.0
Identities = 344/677 (50%), Positives = 469/677 (69%), Gaps = 1/677 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
+ +KQLRGFLGL GYYR+F++++G L+KPLT LLKK+ F+WT A AF+ LK A++TAP
Sbjct: 799 QNVKQLRGFLGLAGYYRRFVQDFGKLAKPLTDLLKKEGFVWTDNATQAFMQLKQALITAP 858
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL+LP+F+K FV+ETDASG G+GAVLMQE P+AY+SK+L P QA+S+ +RE LA++ A
Sbjct: 859 VLSLPNFSKQFVVETDASGKGIGAVLMQEQHPVAYISKSLGPKQQAMSVYERELLAIVYA 918
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+QKW YL F+I+TDQ+++K++LDQ++ TP QQ W+ +LLG D+EI YK+G+ N
Sbjct: 919 VQKWGSYLSHAPFVIRTDQKSIKHMLDQKLNTPFQQVWVAKLLGFDFEIHYKEGSSNLAA 978
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSR+ E L P L + S+ D F +I +P ++P F G
Sbjct: 979 DALSRKTGAELLPLFLDNAAPDLLTSITASWQQDPHFKAIILDLQSNPQSHPKFSWTRGE 1038
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+R +G+L IGSDP ++ IL +H+SA GGHSG + T R+K +FYW M D++ VK+
Sbjct: 1039 LRRRGKLVIGSDPAVKESILHWLHDSALGGHSGRDVTATRIKSLFYWKGMTKDILHYVKN 1098
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C C+ NKPD AYPGLLQPL +PTQ W I+MDFIEGLP S GK VI VVVDR +KYAH
Sbjct: 1099 CGVCQRNKPDLAAYPGLLQPLPIPTQIWTAISMDFIEGLPTSAGKQVIFVVVDRLSKYAH 1158
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
FMALSHP++A +VA+LFLD +++LHG+P +I SDRD IF S FW E FKL GV+L S+A
Sbjct: 1159 FMALSHPYTALDVAQLFLDNVFKLHGMPETITSDRDXIFLSTFWHEFFKLQGVALHKSTA 1218
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHPQSDGQTE +N CLE YLRCM P +WF+WLSLAE+WYNTNYH+S+ TT F+ +YG
Sbjct: 1219 YHPQSDGQTEIVNKCLETYLRCMCSSRPTNWFKWLSLAEWWYNTNYHSSIHTTPFEVVYG 1278
Query: 1779 YPPPL-LSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
PPP+ L P S + L++ R A+++L+ +L++A NR+ A+KHRS++ F +
Sbjct: 1279 QPPPIHLPYLPGSSPSFSVDRSLIA-RDEAIKLLKFHLLRAQNRMSQQANKHRSDRVFSI 1337
Query: 1956 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 2135
GD V+LKLQP+RQ S+ KL ++YGP+ VL++IGG AY+L+L + IH VFHV
Sbjct: 1338 GDYVYLKLQPYRQLSMKKHGYNKLLPKFYGPFKVLDRIGGAAYQLELPPSAAIHNVFHVS 1397
Query: 2136 LLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKA 2315
LK + QP LP + G K+ P+ +LD ++VKR +VL+QW + + A
Sbjct: 1398 QLKLCPNPQAQPIQHLPSA-TAGVPKV-PVAILDRKMVKRGNIAATKVLVQWQDSPPNLA 1455
Query: 2316 TWEDKKFIEKKFPSFNP 2366
TWE + KK+P F+P
Sbjct: 1456 TWEFYSELLKKYPDFHP 1472
Score = 156 bits (395), Expect = 7e-35
Identities = 75/152 (49%), Positives = 104/152 (68%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH+GHYE+LVMPFGL NAPA+FQSLMNQ+F+ +LRKFV++FFDD+LIYS+S E+HL+HL+
Sbjct: 686 THSGHYEYLVMPFGLTNAPASFQSLMNQVFQPFLRKFVIIFFDDLLIYSQSIEDHLVHLR 745
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
+F T+R N L++ SKC+F ++EY+GH I+ GV+ DP KI ++ WP P+ +
Sbjct: 746 LIFHTIRANHLFLNXSKCSFALPKVEYLGHFITKEGVSTDPAKIQAVSSWPIPQNVKQLR 805
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSF 456
F L G + G A P +K F
Sbjct: 806 GFLGLAGYYRRFVQDFGKLAKPLTDLLKKEGF 837
>gb|AAL68644.1|AF458768_1 polyprotein [Oryza sativa Japonica Group]
Length = 933
Score = 670 bits (1729), Expect = 0.0
Identities = 337/681 (49%), Positives = 463/681 (67%), Gaps = 3/681 (0%)
Frame = +3
Query: 342 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDK-FLWTHEAETAFLTLKDAMVTAP 518
TLK+LRGFLGL GYYRKF++++G LSKPLT LLKKD F+W+ E AF LK A+ + P
Sbjct: 204 TLKKLRGFLGLAGYYRKFVKDFGTLSKPLTQLLKKDAPFVWSAEVNQAFQALKHALTSTP 263
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL LP+F + F +ETDAS G+GAVL Q P+A++SK L P Q LS ++E LA++MA
Sbjct: 264 VLALPNFQQGFTIETDASDIGIGAVLSQNQHPVAFVSKALGPRTQGLSTYEKECLAIMMA 323
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+ W+ YL +FLI TD +L +L +QR+ TP QQK T+L GL ++I Y+KG N
Sbjct: 324 VDHWRPYLQFQEFLIITDHHSLMHLTEQRLHTPWQQKAFTKLSGLQFQIVYRKGKHNAAA 383
Query: 879 DTLSRRDVKEDN-CNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGG 1055
D LSR +E + ++T +P WLQ++++ Y D ++ ++P++YP + + G
Sbjct: 384 DALSRHVPEETSEFLGISTCSPVWLQDILHGYDQDPLALSLLTGLAVNPSSYPHYSLSKG 443
Query: 1056 IVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVK 1235
++++KG++ +G++ ++ I++A+H+S GGHSG TY R+K +F WP MK V + +
Sbjct: 444 LIKHKGKVWVGNNSNIQQQIISALHDSPLGGHSGFPVTYKRIKSLFSWPHMKLTVQKQLA 503
Query: 1236 SCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYA 1415
SC C KPD YPGLLQPL VP AW+ I+MDFIEGLPKS ++ ILVVVD+F+KYA
Sbjct: 504 SCAVCLQAKPDRSKYPGLLQPLPVPDGAWQIISMDFIEGLPKSYHQDCILVVVDKFSKYA 563
Query: 1416 HFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSS 1595
HFM LSHPFSA +VAK+F+ +Y+LHGLP I+SDRDKIFTS W++LF G L +SS
Sbjct: 564 HFMPLSHPFSALDVAKVFMLNVYKLHGLPQIIISDRDKIFTSALWEQLFLRSGTKLHLSS 623
Query: 1596 AYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALY 1775
AYHPQSDGQTER+N CLE +LRC VH P W WL LAEFWYN++YH++L T F+ LY
Sbjct: 624 AYHPQSDGQTERVNQCLEIFLRCFVHATPAKWSLWLHLAEFWYNSSYHSALNKTPFEVLY 683
Query: 1776 GYPPPLLSIGPYLDSS-INEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFE 1952
GYPP G D+ I++ +S+R Q+LR +L +A +KT ADK RS +SF+
Sbjct: 684 GYPPS--HFGIRADACVISDLDSWLSERHLMTQLLRQHLNRAQQVMKTQADKKRSFRSFQ 741
Query: 1953 VGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHV 2132
VGD VFLKLQP+ Q+SV+ R + KLS RY+GPY +L K+G VAY+L L S +HPVFHV
Sbjct: 742 VGDWVFLKLQPYVQSSVAKRANHKLSFRYFGPYQILSKVGSVAYKLQLPADSMVHPVFHV 801
Query: 2133 PLLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDK 2312
LK + S LP + + P+Q+LD RI K+ +V Q+L+ W+NL +
Sbjct: 802 SQLKGTQNFKHSIQSQLPNITDHIQY---PVQILDTRIQKKGNKVVRQILVCWSNLPAVE 858
Query: 2313 ATWEDKKFIEKKFPSFNPWGQ 2375
ATWED++ ++++FPS PWGQ
Sbjct: 859 ATWEDEEELKQRFPSALPWGQ 879
Score = 134 bits (338), Expect = 3e-28
Identities = 70/127 (55%), Positives = 79/127 (62%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH+GHYE+ VM FGL APATFQ MN R LRK LVFFDDILIYS HL HL+
Sbjct: 90 THSGHYEYKVMSFGLTGAPATFQGAMNDTLRPLLRKCALVFFDDILIYSPDMNSHLDHLK 149
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
QV L +Q VK SKC+F Q +I Y+GHIIS GV+ DP KI S+V W P L
Sbjct: 150 QVLQLLDTHQWKVKLSKCDFAQTQISYLGHIISGQGVSTDPSKIQSIVDWAVPTTLKKLR 209
Query: 361 DF*VLQG 381
F L G
Sbjct: 210 GFLGLAG 216
>gb|PNX92266.1| retrotransposon-related protein [Trifolium pratense]
Length = 1479
Score = 653 bits (1685), Expect(2) = 0.0
Identities = 322/677 (47%), Positives = 464/677 (68%), Gaps = 1/677 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
K KQLRGFLGL GYYR+F++++G ++KPLT +LK+D FLW+ E+ AF LK A+++AP
Sbjct: 806 KNPKQLRGFLGLAGYYRRFVKDFGKIAKPLTDMLKRDSFLWSSESTAAFTELKQALISAP 865
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
++ LPDF++ FV+ETDASG G+GAVLMQ+ PIAY+SK+L P QA+S+ +RE LA++ A
Sbjct: 866 LMRLPDFSQKFVVETDASGKGIGAVLMQQHHPIAYISKSLGPKQQAMSVYERELLAIVYA 925
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+QKW YL F+IKTDQ+++K++LDQ++ T QQ W+ +L+G D+EIQYK+G N
Sbjct: 926 VQKWGAYLSHAPFIIKTDQRSIKHILDQKLNTSFQQAWVAKLMGFDFEIQYKEGAHNLAA 985
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSRR+ E L + +P + + S+ D K+IA L+ ++P F
Sbjct: 986 DALSRREGAELLPMLLNSASPDLYESIKASWTRDPSVQKLIADLVLNHNSHPKFSWVRNE 1045
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+R +G+L IG DP L++ IL +H+S+ GGHSG + T R+K +FYW M D+ V++
Sbjct: 1046 LRRRGKLVIGQDPHLKNSILRWLHDSSVGGHSGRDITAARVKSLFYWKGMAKDIQIYVRN 1105
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C C+ NK D A PGLLQPL +P++ W I+MDFIEGLP S GK VI VVVDR +KYAH
Sbjct: 1106 CAVCQRNKADLSASPGLLQPLPIPSKIWVDISMDFIEGLPPSAGKQVIFVVVDRLSKYAH 1165
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
F+ LSHP++A ++AK+FLD +++LHGLP SI SDRD IF S FW E FKL GV+L+ S+A
Sbjct: 1166 FIPLSHPYTAVDIAKVFLDNVFKLHGLPESITSDRDPIFLSTFWNEFFKLQGVALNKSTA 1225
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHPQSDGQTE +N +E YLRCM E P W +W+ +AE+WYN+N+H++++TT ++ +YG
Sbjct: 1226 YHPQSDGQTEIVNKAVETYLRCMCSEKPTSWSQWIPMAEYWYNSNFHSAIQTTPYEVVYG 1285
Query: 1779 YPPPL-LSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
PPP+ L P SS+ L++ R+ A+++L+ +L++A NR+ ADKHRS++ FE+
Sbjct: 1286 QPPPIHLPYLPGASSSVTVDGSLLA-REEAIKLLKFHLLRAQNRMIQQADKHRSDRKFEI 1344
Query: 1956 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 2135
GD V+LKL P+RQ SV KL +++GP+ V++K+G VAY+L+L IH VFHV
Sbjct: 1345 GDFVYLKLHPYRQLSVKPHLHHKLLPKFFGPFKVIDKVGHVAYQLELPSSVAIHNVFHVS 1404
Query: 2136 LLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKA 2315
LK + + P +P+ F P +LD ++VKR + +VL++W N + A
Sbjct: 1405 QLKLCPNPASNPI--VPIPAGVDQFHRVPEAILDRKMVKRGRTAATKVLVKWQNTSPELA 1462
Query: 2316 TWEDKKFIEKKFPSFNP 2366
TWE + +KFP+F+P
Sbjct: 1463 TWEFYYDLLEKFPNFHP 1479
Score = 153 bits (387), Expect(2) = 0.0
Identities = 65/114 (57%), Positives = 90/114 (78%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH+GH+EFLVMPFGL NAPA+FQSLMN +F+ +LR+FV++FFDD+L+YSKS +EH+ HL
Sbjct: 693 THSGHFEFLVMPFGLTNAPASFQSLMNHLFKPFLRRFVIIFFDDLLVYSKSLQEHIEHLS 752
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPK 342
+F +R +QL++ R KC+FG +EY+GH I+ GV+ DP KI ++ WP PK
Sbjct: 753 SIFKLIRVHQLFLNRKKCSFGTERVEYLGHFITKEGVSTDPAKIQAVRDWPFPK 806
>gb|PNX92911.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
Length = 1478
Score = 684 bits (1766), Expect = 0.0
Identities = 345/677 (50%), Positives = 469/677 (69%), Gaps = 1/677 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
+ LKQLRGFLGL GYYR+F++++G ++KPLT LLKKD F+W+ A +AFL LK A+VTAP
Sbjct: 805 QNLKQLRGFLGLAGYYRRFVKDFGKIAKPLTDLLKKDCFIWSENATSAFLNLKQALVTAP 864
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL LPDFTK FV+ETDASGTG+GAVLMQ+ P+AY+SK+L P QA+SI +RE LA++ A
Sbjct: 865 VLCLPDFTKKFVVETDASGTGIGAVLMQDHHPVAYISKSLGPKQQAMSIYEREMLAIVYA 924
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+QKW YL F+IKTDQ+++K++LDQ++ TP QQ W+ +L+G D+EIQY++G+ N
Sbjct: 925 VQKWGSYLSHAPFVIKTDQKSIKHMLDQKLNTPFQQVWVAKLMGFDFEIQYREGSSNLAA 984
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSR+ E L + LQ + S+ +DS +I DP +P F
Sbjct: 985 DALSRKTGAELLILLLNNASTDLLQAIQLSWQSDSILNSIIQDLQKDPKIHPKFSWVRNE 1044
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+R +G+L IG++ ++ IL+ +H+SA GGHSG + T R++ +FYW M DV+ V++
Sbjct: 1045 LRRRGKLVIGANHDIKLSILSWLHDSAIGGHSGRDVTLSRIRSLFYWKGMAKDVLNYVRN 1104
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C C+ +KPD A PGLLQPL +PT W I+MDFIEGLPKS GK VI VVVDR +KYAH
Sbjct: 1105 CGICQKSKPDLAASPGLLQPLPIPTLIWTDISMDFIEGLPKSGGKQVIFVVVDRLSKYAH 1164
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
FMAL+HP++AS+VA+LFLD +++LHGLP SI SDRD IF S FW E FKL GV+L+ SSA
Sbjct: 1165 FMALAHPYTASDVAQLFLDNVFKLHGLPESITSDRDPIFISTFWNEFFKLQGVALNKSSA 1224
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHPQSDGQTE +N CLE YLRCM + P WF+WLSLAE+WYNTNYH+S++TT F+ +YG
Sbjct: 1225 YHPQSDGQTEIVNKCLETYLRCMCSDKPTQWFKWLSLAEWWYNTNYHSSIRTTPFEVVYG 1284
Query: 1779 YPPPL-LSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
PPP+ L P +S++ L++ R+ +++L+ +L++A NR+ ADKHRS++ F +
Sbjct: 1285 QPPPIHLPYLPGAATSVSVDRSLIA-REEVIKLLQFHLLRAQNRMSQQADKHRSDRVFSI 1343
Query: 1956 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 2135
GD V+LKLQP+RQ S+ KL ++YGP+ VL++IG AY LDL + H VFHV
Sbjct: 1344 GDFVYLKLQPYRQLSLKSHGVHKLLPKFYGPFKVLDRIGLAAYALDLPPSTVFHNVFHVS 1403
Query: 2136 LLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKA 2315
LK + P LP + K+ P +LD ++VKR +VL+QW + D A
Sbjct: 1404 QLKLCPNPHHHPIQHLP-AEISAVSKV-PTAILDRKMVKRGHVAATKVLVQWKDSPPDAA 1461
Query: 2316 TWEDKKFIEKKFPSFNP 2366
TWE + KKFP F+P
Sbjct: 1462 TWEFYHDLIKKFPEFHP 1478
Score = 155 bits (392), Expect = 2e-34
Identities = 72/142 (50%), Positives = 100/142 (70%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH+GHYE+LVMPFGL NAPA+FQSLMN +F+ +LRKFV++FFDD+LIYSKS E+H+ HL+
Sbjct: 692 THSGHYEYLVMPFGLTNAPASFQSLMNHVFQPFLRKFVIIFFDDLLIYSKSLEDHVCHLR 751
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
+F T+R+N L + +SKC+F ++EY+GH I+ G++ DP KI ++ WP P+ L
Sbjct: 752 MIFQTVRDNHLLLNKSKCSFALPKVEYLGHFITVDGISTDPSKIQAVSSWPIPQNLKQLR 811
Query: 361 DF*VLQGITGNLSEIMGF*ANP 426
F L G + G A P
Sbjct: 812 GFLGLAGYYRRFVKDFGKIAKP 833
>gb|ABF94845.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 937
Score = 655 bits (1689), Expect(2) = 0.0
Identities = 333/688 (48%), Positives = 447/688 (64%)
Frame = +3
Query: 342 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 521
++ +LRGFLGLTGYYRKF++ Y ++++PLTLLLKK FLWT A+ AF LK AM P+
Sbjct: 241 SVTELRGFLGLTGYYRKFVQGYSIIARPLTLLLKKKAFLWTDAAQLAFDQLKTAMSNTPM 300
Query: 522 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 701
L LP+F PF LETDA G+GAVL Q+G PIAY SK L P+NQ LSI ++EFLA++MA+
Sbjct: 301 LALPNFQLPFTLETDACAYGLGAVLSQQGHPIAYYSKTLGPVNQKLSIYEKEFLAIMMAV 360
Query: 702 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 881
KW+ YL F+IKT + L +L DQ + T +QQK +T+L+GL Y QYK+G N V D
Sbjct: 361 DKWRCYLQRGPFIIKTYHKILCHLDDQILGTELQQKAMTKLMGLQYSFQYKRGVNNIVAD 420
Query: 882 TLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIV 1061
LSR C A + + P W+QE+INSY D +++A + + + GI+
Sbjct: 421 ALSRMPSSSQFC-AFSVVQPIWIQEMINSYTVDPQAQQLLAELAVHSPNSQGYSLTQGII 479
Query: 1062 RYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSC 1241
R++ ++ IGS+ L + ++ A H SA GGHSG+ TY R+K +F WP +K DV VK C
Sbjct: 480 RFQNKIWIGSNAGLHTKLIQAFHASALGGHSGIAATYHRIKKLFAWPGLKLDVENFVKQC 539
Query: 1242 DTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHF 1421
C+ K ++ PGLL PL +P +AW+ I+MDFIEGLP+S G N ILVVVDRFTKYA+F
Sbjct: 540 QVCQQAKHEHCRLPGLLAPLPIPKEAWQDISMDFIEGLPRSDGYNAILVVVDRFTKYANF 599
Query: 1422 MALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAY 1601
+ L HPF+AS VA L T+++ HG+P SIVSDRD++FTS FW LF L MS+AY
Sbjct: 600 IPLRHPFTASQVAHLVDKTVFKTHGIPRSIVSDRDRLFTSKFWTTLFATWDTQLQMSTAY 659
Query: 1602 HPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGY 1781
HPQ+DGQ ER+N CLE YLRCM NPK W W+ LAEFWYNTNYHT L + +AL+G
Sbjct: 660 HPQTDGQIERVNQCLEMYLRCMTQANPKKWSHWIHLAEFWYNTNYHTYLGCSPHKALFGV 719
Query: 1782 PPPLLSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEVGD 1961
P + +++ + D+ ++RQ + L+ L +A R+K DK RS++ F VGD
Sbjct: 720 DPHYSQVPDLTLATLPDVVDVQTERQHLSEFLQQQLTRAQLRMKNKVDKGRSDRVFAVGD 779
Query: 1962 QVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVPLL 2141
VFLKLQP+ Q+SV R KL+ +++GP+ VLE+IG AYRLDL S +HPVFHV L
Sbjct: 780 AVFLKLQPYAQSSVVNRPYPKLAYKFFGPFTVLERIGVAAYRLDLPASSTVHPVFHVSQL 839
Query: 2142 KKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKATW 2321
K +V D T + LP + P +L+ R+VKR QVL++W++L D ATW
Sbjct: 840 KAQVPDHTPVYTSLPSQVVLDAADVVPEAILERRLVKRSNAAHVQVLLKWSSLPADHATW 899
Query: 2322 EDKKFIEKKFPSFNPWGQGLSPPRGIVM 2405
ED ++ +FP WGQ +P G VM
Sbjct: 900 EDYHVVKTRFPDAPAWGQAETPAGGTVM 927
Score = 148 bits (374), Expect(2) = 0.0
Identities = 65/113 (57%), Positives = 87/113 (76%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH+G ++F VMPFGL NAP+TFQ LMN + ++RKFVLVF DDIL+YS + HL HLQ
Sbjct: 127 THHGQFQFRVMPFGLTNAPSTFQCLMNSVLAPFIRKFVLVFMDDILVYSPDLDSHLHHLQ 186
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 339
QVF+ LR +QL+ +RSKC+F ++EY+GHIIS GV+ DP+K ++M+ WP P
Sbjct: 187 QVFVILRQHQLFARRSKCSFACTQLEYLGHIISDKGVSTDPEKTAAMLAWPVP 239
>ref|XP_022547700.1| uncharacterized protein LOC111200699 [Brassica napus]
Length = 2724
Score = 636 bits (1641), Expect(2) = 0.0
Identities = 323/678 (47%), Positives = 449/678 (66%), Gaps = 3/678 (0%)
Frame = +3
Query: 342 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 521
++KQLR FLGL YYR+FIR Y VLS+PLT LL+KD FLW EA+TA LK A+ ++PV
Sbjct: 2050 SVKQLRSFLGLANYYRRFIRGYSVLSRPLTTLLQKDGFLWNSEADTALDNLKSALSSSPV 2109
Query: 522 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 701
L LPDF K FV+ETDAS TG+GAVLMQ+ PI ++S+ L P NQALS+ ++E +AV+ A+
Sbjct: 2110 LALPDFDKTFVVETDASNTGIGAVLMQDNHPICFISRALGPRNQALSVYEKELMAVVHAV 2169
Query: 702 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 881
Q W YL +F+IKTDQ++LKY+++Q+ TP Q W+++L+G D+EIQYK G EN D
Sbjct: 2170 QAWSAYLAHRRFIIKTDQKSLKYMVEQKATTPFQHMWLSKLMGYDFEIQYKLGKENVAAD 2229
Query: 882 TLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIV 1061
LSR + L+ + + + +D K+I+ DP ++P + +
Sbjct: 2230 ALSRVSGSQLLHMTLSQAHQGFYDSLRLLWQSDPKLRKIISELQADPKSHPSYTFINEEL 2289
Query: 1062 RYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSC 1241
R KG+L +G+D +++ I +H+SA GGHSG + T R+K +F+W KM +V V++C
Sbjct: 2290 RRKGKLVVGNDVNIKTHIFRWLHDSAIGGHSGRDATLHRIKSLFFWSKMSLEVQNYVRNC 2349
Query: 1242 DTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHF 1421
D C+ NK +N A PGLL PL +P W+ +++DFIEGLP+S GK+ ILVV+DR +K AHF
Sbjct: 2350 DVCQKNKYENVAKPGLLNPLPIPNGVWESVSLDFIEGLPQSAGKHCILVVIDRLSKQAHF 2409
Query: 1422 MALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAY 1601
+ALSHP++A VA+ +LD +++LHGLP I+SDRD F S+ WKELF++ GV L S+AY
Sbjct: 2410 LALSHPYTAIEVAQAYLDNVFKLHGLPKDIISDRDPTFLSDVWKELFRVHGVDLSYSTAY 2469
Query: 1602 HPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYGY 1781
HPQ+DGQTE N LE YLRCM E P+ W +WL LAE+WYNT YH+++++T F +YG
Sbjct: 2470 HPQTDGQTEVTNKTLETYLRCMTAETPQTWSKWLPLAEWWYNTTYHSAIRSTPFGIVYGQ 2529
Query: 1782 PPPLLSIGPYLDSSINEA--HDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
PPP + PYL A + +R+ + +L+ +L++A NR K AD HRS +SF V
Sbjct: 2530 PPP--THLPYLPGESKSALVDRSLQKREEVISMLKFHLLRAQNRNKQAADSHRSPRSFTV 2587
Query: 1956 GDQVFLKLQPFRQNSVSLRK-SLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHV 2132
G V+LKLQP+RQNS+ RK KLS RYYGP+ VL+ +G AYRLDL G+ IH VFHV
Sbjct: 2588 GSYVYLKLQPYRQNSLKNRKVPHKLSPRYYGPFRVLDTVGSAAYRLDLPAGAAIHNVFHV 2647
Query: 2133 PLLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDK 2312
L K + SS LP + EP Q+L+ ++ KR+ V +VL+QW ++
Sbjct: 2648 SQL-KLCPNPQAASSGLPQFYVDLGTSKEPEQILETKMAKRRNAAVTKVLVQWKGETPEQ 2706
Query: 2313 ATWEDKKFIEKKFPSFNP 2366
ATWE K+ K P F+P
Sbjct: 2707 ATWEFYKYFIAKHPQFHP 2724
Score = 166 bits (420), Expect(2) = 0.0
Identities = 75/113 (66%), Positives = 89/113 (78%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
+H GHYE+LVMPFGL NAP TFQSLMN +F++ RKF+LVFFDDIL+YS WE HL HLQ
Sbjct: 1936 SHAGHYEYLVMPFGLSNAPCTFQSLMNHVFQDISRKFLLVFFDDILVYSPDWESHLQHLQ 1995
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 339
+VF LR+ QLY+K SKC FG EIEY+GH IS GV DP KI+++ QWPTP
Sbjct: 1996 EVFSILRHQQLYLKASKCTFGATEIEYLGHFISAEGVRTDPSKIAAIKQWPTP 2048
Score = 483 bits (1242), Expect(2) = e-175
Identities = 232/464 (50%), Positives = 322/464 (69%)
Frame = +3
Query: 342 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 521
++KQLR FLGL YYR+FIR Y VLS+PLT LL+KD FLW EA+TA LK A+ ++PV
Sbjct: 846 SVKQLRSFLGLANYYRRFIRGYSVLSRPLTTLLQKDGFLWNSEADTALDNLKSALSSSPV 905
Query: 522 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 701
L LPDF K FV+ETDAS TG+GAVLMQ+ PI ++S+ L P NQALS+ ++E +AV+ A+
Sbjct: 906 LALPDFDKTFVVETDASNTGIGAVLMQDNHPICFISRALGPRNQALSVYEKELMAVVHAV 965
Query: 702 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 881
Q W YL +F+IKTDQ++LKY+++Q+ TP Q W+++L+G D+EIQYK G EN D
Sbjct: 966 QAWSAYLAHRRFIIKTDQKSLKYMVEQKATTPFQHMWLSKLMGYDFEIQYKLGKENVAAD 1025
Query: 882 TLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGIV 1061
LSR + L+ + + + +D K+I+ DP ++P + +
Sbjct: 1026 ALSRVSGSQLLHMTLSQAHQGFYDSLRLLWQSDPKLRKIISELQADPKSHPSYTFINEEL 1085
Query: 1062 RYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKSC 1241
R KG+L +G++ +++ I +H+SA GGHSG + T R+K +F+W KM +V V++C
Sbjct: 1086 RRKGKLVVGNNVNIKTHIFRWLHDSAIGGHSGRDATLHRIKSLFFWSKMSLEVQNYVRNC 1145
Query: 1242 DTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAHF 1421
D C+ NK +N A PGLL PL +P W+ +++DFIEGLP+S GK+ ILVV+DR +K AHF
Sbjct: 1146 DVCQKNKYENVAKPGLLNPLPIPNGVWESVSLDFIEGLPQSAGKHCILVVIDRLSKQAHF 1205
Query: 1422 MALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSAY 1601
+ALSHP++A VA+ +LD +++LHGLP I+SDRD F S+ WKELF++ GV L S+AY
Sbjct: 1206 LALSHPYTAIEVAQAYLDNVFKLHGLPKDIISDRDPTFLSDVWKELFRVHGVDLRYSTAY 1265
Query: 1602 HPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTN 1733
HPQ+DGQTE N LE YLRCM E P+ W +WL LAE+WYNTN
Sbjct: 1266 HPQTDGQTEVTNKTLETYLRCMTAETPQTWSKWLPLAEWWYNTN 1309
Score = 166 bits (420), Expect(2) = e-175
Identities = 75/113 (66%), Positives = 89/113 (78%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
+H GHYE+LVMPFGL NAP TFQSLMN +F++ RKF+LVFFDDIL+YS WE HL HLQ
Sbjct: 732 SHAGHYEYLVMPFGLSNAPCTFQSLMNHVFQDISRKFLLVFFDDILVYSPDWESHLQHLQ 791
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTP 339
+VF LR+ QLY+K SKC FG EIEY+GH IS GV DP KI+++ QWPTP
Sbjct: 792 EVFSILRHQQLYLKASKCTFGATEIEYLGHFISAEGVRTDPSKIAAIKQWPTP 844
>gb|PKA66820.1| putative mitochondrial protein [Apostasia shenzhenica]
Length = 1117
Score = 669 bits (1727), Expect = 0.0
Identities = 334/679 (49%), Positives = 469/679 (69%), Gaps = 5/679 (0%)
Frame = +3
Query: 342 TLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAPV 521
+LK+LRGFLGLTGYYR+FI+ YG+ SKPLT LLK++ F WT +A +F LK M + PV
Sbjct: 439 SLKELRGFLGLTGYYRRFIKGYGMASKPLTELLKQNSFSWTEQANKSFQQLKQLMSSPPV 498
Query: 522 LTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMAI 701
L+LP+F +PFV+ETDASG G+GAVLMQ G PIA+ SK L +Q L + +RE LA++ A+
Sbjct: 499 LSLPNFDQPFVIETDASGIGIGAVLMQGGHPIAFFSKGLSLTHQKLPVYEREMLAMVAAV 558
Query: 702 QKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVVD 881
QKW+ YL G+ F IKTD Q+LK+LL QRI TP QQ+W+++L G D+EI YKKG EN V D
Sbjct: 559 QKWRPYLIGNHFKIKTDHQSLKFLLQQRISTPAQQRWLSKLSGYDFEIVYKKGKENIVAD 618
Query: 882 TLSRRDVKE--DNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGG 1055
TLS V+ + L ++ L E+ NS+ D+ + VI D +
Sbjct: 619 TLSSTPVERPIEIYAVLQPVSTNLLTEIQNSWNADTQASDVINQLKQDVILDKPYSWNNN 678
Query: 1056 IVRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVK 1235
+ +KGRL +G D LR I+ +H + GGHSG T RLK +FYW M + ++
Sbjct: 679 KLLWKGRLVVGKDLNLRRRIIQMIHADSTGGHSGFLPTLQRLKSIFYWRGMSKATKRELQ 738
Query: 1236 SCDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYA 1415
C+ C+L+K + A PGLLQPL +P W +++DFI+GLPKS GK+ ILVVVDR +KYA
Sbjct: 739 ECEVCQLSKYEPVASPGLLQPLPIPEGIWTDVSLDFIDGLPKSHGKDTILVVVDRLSKYA 798
Query: 1416 HFMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSS 1595
HF+AL+HPF+A VA+++LD +Y+LHG+P +++SDRD IF S FW+EL KL+ V+L MS+
Sbjct: 799 HFIALAHPFTAVTVAQVYLDNVYKLHGMPKNLISDRDAIFLSKFWQELLKLLKVNLSMST 858
Query: 1596 AYHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALY 1775
AYHPQ+DGQTE +N LE YLRCM E P W +WL+LAE+WYNTN+H+S K T ++ +Y
Sbjct: 859 AYHPQTDGQTEVVNRGLETYLRCMTAEKPAEWSKWLTLAEWWYNTNFHSSTKNTPYEIVY 918
Query: 1776 GYPPPLLSIGPYLDS--SINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSF 1949
G PPL PY+ S S+ + ++ ++V++++L QA NR+K ADKHR E+
Sbjct: 919 GQKPPLHI--PYIASSASVETVDRSLQAKEEMLRVIKNHLHQAINRMKVQADKHRREREL 976
Query: 1950 EVGDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFH 2129
+VGD ++KLQP+RQ+S++ RKS KLS R++GP+ VL K+G VAY+L L E +K+HPVFH
Sbjct: 977 QVGDFAYVKLQPYRQHSLARRKSYKLSPRFFGPFEVLAKVGKVAYKLKLPEHAKLHPVFH 1036
Query: 2130 VPLLKKRVSDGTQPSSDLPL-VDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGV 2306
+ LLKK++ + + LPL + S+G+ ++EP+ +L R + R++ + QVLIQW+N
Sbjct: 1037 ISLLKKKIGNAPE-GETLPLEITSQGHLRVEPMAILKRRTILRRKQFLEQVLIQWSNSNK 1095
Query: 2307 DKATWEDKKFIEKKFPSFN 2363
D +WED +I ++FPSFN
Sbjct: 1096 DDCSWEDLNWIRQQFPSFN 1114
Score = 154 bits (390), Expect = 2e-34
Identities = 77/130 (59%), Positives = 91/130 (70%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH GHYEFLVMPFGL NAPATFQ LMN IF+ +LRKFVLVF DDIL+YSK W EHL HL+
Sbjct: 325 THEGHYEFLVMPFGLTNAPATFQKLMNSIFKPFLRKFVLVFLDDILVYSKQWYEHLEHLK 384
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
VF L + L VK+ KC F I+Y+GH IS GV+ DP KI ++++WPTP L
Sbjct: 385 LVFDVLIKHSLKVKKGKCEFATHGIDYLGHHISVDGVSTDPAKIQAIMEWPTPNSLKELR 444
Query: 361 DF*VLQGITG 390
F G+TG
Sbjct: 445 GF---LGLTG 451
>gb|PNY17729.1| retrotransposon-related protein [Trifolium pratense]
Length = 1479
Score = 680 bits (1755), Expect = 0.0
Identities = 339/677 (50%), Positives = 471/677 (69%), Gaps = 1/677 (0%)
Frame = +3
Query: 339 KTLKQLRGFLGLTGYYRKFIRNYGVLSKPLTLLLKKDKFLWTHEAETAFLTLKDAMVTAP 518
+ LKQLRGFLGL GYYR+F++++G L+KPLT LL+KD F W+ EA AF+TLK A+V+AP
Sbjct: 805 QNLKQLRGFLGLAGYYRRFVKDFGKLAKPLTDLLRKDNFNWSAEATHAFVTLKQALVSAP 864
Query: 519 VLTLPDFTKPFVLETDASGTGVGAVLMQEGRPIAYMSKNLCPMNQALSI*KREFLAVLMA 698
VL+LPDF+K FV+ETDASG G+GAVLMQE PIAY+SK+L P QA+S+ +RE LA++ A
Sbjct: 865 VLSLPDFSKRFVVETDASGKGIGAVLMQEHHPIAYISKSLGPKQQAMSVYERELLAIVYA 924
Query: 699 IQKWKHYLHGHKFLIKTDQQALKYLLDQRIMTPMQQKWITQLLGLDYEIQYKKGNENRVV 878
+QKW YL F IKTDQ+++K++LDQ++ TP QQ W+ +LLG D++IQYK+G+ N
Sbjct: 925 VQKWGSYLSHAPFTIKTDQKSIKHMLDQKLNTPFQQVWVAKLLGFDFDIQYKEGSSNVAA 984
Query: 879 DTLSRRDVKEDNCNALTTITPTWLQEVINSYANDSFFAKVIAANTLDPTTYPDFIVRGGI 1058
D LSR+ E ++ + + + ++ D + +I + ++ F
Sbjct: 985 DALSRKMGAELLALMMSNASHDLWESINLAWQQDPYLKDIIHEVQQNSKSHSKFSWIRDE 1044
Query: 1059 VRYKGRLGIGSDPKLRSMILAAMHNSAYGGHSGVNGTYMRLKGVFYWPKMKDDVIQLVKS 1238
+R +G+L IGSDP ++ IL +H+SA GGHSG + T ++K +FYW M D++ VK+
Sbjct: 1045 LRRRGKLVIGSDPAIKETILTWLHSSAVGGHSGRDVTASKVKSLFYWKGMNKDILNFVKN 1104
Query: 1239 CDTCKLNKPDNDAYPGLLQPLHVPTQAWKHITMDFIEGLPKSTGKNVILVVVDRFTKYAH 1418
C C+ KPD A PGLLQPL +P+ W HI+MDFI+GLP S+GK VI VVVDR +KYAH
Sbjct: 1105 CAICQKQKPDLAASPGLLQPLPIPSHIWAHISMDFIDGLPTSSGKQVIFVVVDRLSKYAH 1164
Query: 1419 FMALSHPFSASNVAKLFLDTIYRLHGLPVSIVSDRDKIFTSNFWKELFKLMGVSLDMSSA 1598
FMAL+HP++A +VA+LFLD +++LHGLP SI SDRD IF SNFW E FKL GV+L+ SSA
Sbjct: 1165 FMALAHPYTALDVAQLFLDNVFKLHGLPESITSDRDPIFLSNFWNEFFKLQGVALNKSSA 1224
Query: 1599 YHPQSDGQTERLN*CLENYLRCMVHENPKHWFRWLSLAEFWYNTNYHTSLKTTHFQALYG 1778
YHPQSDGQTE +N CLE YLRCM ++P WF+WLSLAE+WYNTN+H+S+ TT F+ +YG
Sbjct: 1225 YHPQSDGQTEIVNKCLETYLRCMCSDHPTQWFKWLSLAEWWYNTNFHSSIHTTPFEVVYG 1284
Query: 1779 YPPPL-LSIGPYLDSSINEAHDLVSQRQRAVQVLRDNLIQAHNRLKTYADKHRSEKSFEV 1955
PPP+ L P ++++ L++ R+ A+++L+ +L++A NR+ A+KHRS++ F +
Sbjct: 1285 QPPPIHLPYLPGSSATLSVDRSLIA-REEAIKLLKFHLLRAQNRMVQQANKHRSDRVFNI 1343
Query: 1956 GDQVFLKLQPFRQNSVSLRKSLKLSARYYGPYIVLEKIGGVAYRLDLLEGSKIHPVFHVP 2135
GD V+LKLQP+RQ S+ KL ++YGP+ ++++IG AY+L L + IH VFHV
Sbjct: 1344 GDYVYLKLQPYRQLSMKSHGFHKLLPKFYGPFPIVDRIGAAAYQLQLPPSAAIHNVFHVS 1403
Query: 2136 LLKKRVSDGTQPSSDLPLVDSEGNFKIEPLQVLDHRIVKRKQNMVPQVLIQWANLGVDKA 2315
LK + P LP KI P+ +LD ++VKR +VLIQW NL +DKA
Sbjct: 1404 QLKLCPNPQGLPVQHLPAATVAHVDKI-PVAILDRKMVKRGHKAATKVLIQWKNLPLDKA 1462
Query: 2316 TWEDKKFIEKKFPSFNP 2366
TWE KKFP+F+P
Sbjct: 1463 TWEFYYDFLKKFPTFHP 1479
Score = 154 bits (388), Expect = 5e-34
Identities = 75/152 (49%), Positives = 101/152 (66%)
Frame = +1
Query: 1 THNGHYEFLVMPFGLCNAPATFQSLMNQIFREYLRKFVLVFFDDILIYSKSWEEHLLHLQ 180
TH+GH+E+LVMPFGL NAPA+FQ+LMNQ+F+ +LRKFV+VFFDD+L+YS S +H +HLQ
Sbjct: 692 THSGHFEYLVMPFGLTNAPASFQALMNQVFKPFLRKFVIVFFDDLLVYSHSLVDHHVHLQ 751
Query: 181 QVFLTLRNNQLYVKRSKCNFGQLEIEYIGHIISHYGVAIDPQKISSMVQWPTPKLLNS*G 360
+F T+R N L++ +SKC F +EY+GH IS GV+ DP KI ++ WP P+ L
Sbjct: 752 LIFQTIRENHLFLNQSKCAFALPRVEYLGHFISREGVSTDPLKIQAVSSWPIPQNLKQLR 811
Query: 361 DF*VLQGITGNLSEIMGF*ANP*HSC*RKTSF 456
F L G + G A P RK +F
Sbjct: 812 GFLGLAGYYRRFVKDFGKLAKPLTDLLRKDNF 843