BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00007103
         (904 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV45057.1| hypothetical protein F511_10374 [Dorcoceras hygro...    65   2e-08
gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]    62   7e-07
gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]    61   1e-06
gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]    61   1e-06
gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]    61   1e-06
gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]             60   2e-06
ref|NP_395469.1| putative reverse transcriptase [Blueberry red r...    60   2e-06
ref|NP_861410.1| putative multifunctional pol protein [Cestrum y...    60   3e-06

>gb|KZV45057.1| hypothetical protein F511_10374 [Dorcoceras hygrometricum]
          Length = 245

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
 Frame = -3

Query: 293 VKEGELNLRPQI--GKSKVQTDEIKISPMQVYQRQWEKLVTRQGINPEKTMVDISGKYPR 120
           ++E E+NLRPQ   GK+KV T+EI ISP +   R  +  +  Q  N     VDISGKY R
Sbjct: 65  IEEEEINLRPQTDKGKTKVDTNEIVISPFRFINRSGK--IEIQDRNSVTCRVDISGKYTR 122

Query: 119 VWMKPGSHPNEV 84
           +WM+P +HP +V
Sbjct: 123 IWMRPNAHPKDV 134


>gb|AEQ49589.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 61.6 bits (148), Expect = 7e-07
 Identities = 30/72 (41%), Positives = 43/72 (59%)
 Frame = -3

Query: 902 KAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYYDYDIVIIKS 723
           + F+KW + LL+K F LK D+  V  FL+ KI++   + RL+RWQ E   ++Y    IK 
Sbjct: 582 QTFRKWKVDLLSKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQFNYRTFYIKG 641

Query: 722 HENILADFLTRD 687
            EN   D LTR+
Sbjct: 642 SENYGPDTLTRE 653


>gb|AEQ38577.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = -3

Query: 902 KAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYYDYDIVIIKS 723
           + F+KW + LL+K F LK D+  V  FL+ KI++   + RL+RWQ E   + Y    IK 
Sbjct: 582 QTFRKWKVDLLSKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQFSYRTFYIKG 641

Query: 722 HENILADFLTRD 687
            EN   D LTR+
Sbjct: 642 SENYGPDTLTRE 653


>gb|AEH95573.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 667

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = -3

Query: 902 KAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYYDYDIVIIKS 723
           + F+KW + LL+K F LK D+  V  FL+ KI++   + RL+RWQ E   + Y    IK 
Sbjct: 592 QTFRKWKVDLLSKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQFSYRTFYIKG 651

Query: 722 HENILADFLTRD 687
            EN   D LTR+
Sbjct: 652 SENYGPDTLTRE 663


>gb|AEE01492.1| reverse transcriptase [Blueberry red ringspot virus]
          Length = 680

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 30/72 (41%), Positives = 42/72 (58%)
 Frame = -3

Query: 902 KAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYYDYDIVIIKS 723
           + F+KW + LL K F LK D+  V  FL+ KI++   + RL+RWQ E   ++Y    IK 
Sbjct: 605 QTFRKWKVDLLTKPFILKTDSKYVTGFLRYKIKANYNQGRLIRWQLELSQFNYRTFYIKG 664

Query: 722 HENILADFLTRD 687
            EN   D LTR+
Sbjct: 665 SENYGPDTLTRE 676


>gb|AGT41978.1| reverse transcriptase [Dahlia mosaic virus]
          Length = 825

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 28/68 (41%), Positives = 43/68 (63%)
 Frame = -3

Query: 890 KWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYYDYDIVIIKSHENI 711
           K+ ++L+  KF ++ DN +   FLK KI    ++ RL+RWQ     Y +DI  ++  +N+
Sbjct: 751 KFSIYLIPVKFLVRTDNRNFTYFLKTKISGDNKQGRLVRWQMWFSRYSFDIEHLEGPKNV 810

Query: 710 LADFLTRD 687
           LADFLTRD
Sbjct: 811 LADFLTRD 818


>ref|NP_395469.1| putative reverse transcriptase [Blueberry red ringspot virus]
 gb|AAL13274.1|AF404509_4 putative reverse transcriptase [Blueberry red ringspot virus]
          Length = 657

 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 29/72 (40%), Positives = 42/72 (58%)
 Frame = -3

Query: 902 KAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYYDYDIVIIKS 723
           + F+KW + LL+K F LK D+  V  FL+ KI++   + R +RWQ E   ++Y    IK 
Sbjct: 582 QTFRKWKVDLLSKPFILKTDSKYVTGFLRYKIKANYNQGRFIRWQLELSQFNYRTFYIKG 641

Query: 722 HENILADFLTRD 687
            EN   D LTR+
Sbjct: 642 SENYGPDTLTRE 653


>ref|NP_861410.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus]
 sp|Q7TD08.1|POL_CYLCV RecName: Full=Enzymatic polyprotein; Includes: RecName:
           Full=Aspartic protease; Includes: RecName:
           Full=Endonuclease; Includes: RecName: Full=Reverse
           transcriptase
 gb|AAP78924.1| putative multifunctional pol protein [Cestrum yellow leaf curling
           virus]
          Length = 643

 Score = 59.7 bits (143), Expect = 3e-06
 Identities = 29/72 (40%), Positives = 43/72 (59%)
 Frame = -3

Query: 902 KAFKKWPLFLLAKKFTLKIDNSSVKAFLKNKIESKPEKARLLRWQAECQYYDYDIVIIKS 723
           K  +KW   LL K+FTL+ D+S V  F ++ +++   + RL+RWQ E   Y   +  IK 
Sbjct: 568 KTMRKWKAELLPKEFTLRTDSSYVTGFARHNLKANYNQGRLVRWQLEFLQYPARVEYIKG 627

Query: 722 HENILADFLTRD 687
            +N LAD LTR+
Sbjct: 628 EKNSLADTLTRE 639