BLASTX nr result

ID: Rehmannia32_contig00006876 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00006876
         (536 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN21745.1| hypothetical protein CDL12_05555 [Handroanthus im...    55   5e-06

>gb|PIN21745.1| hypothetical protein CDL12_05555 [Handroanthus impetiginosus]
          Length = 197

 Score = 55.1 bits (131), Expect = 5e-06
 Identities = 27/48 (56%), Positives = 29/48 (60%)
 Frame = +3

Query: 87  PRPRGRPPKSQDXXXXXXXXXXXXXXXXXXLSGKKRGRPPKAATAGVT 230
           PRPRGRPPKS+D                  +SGKKRGRPPKAATAG T
Sbjct: 121 PRPRGRPPKSRDPTAPPPPPKPKATSTTGSVSGKKRGRPPKAATAGAT 168