BLASTX nr result
ID: Rehmannia32_contig00006789
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00006789
(557 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011097646.1| 30S ribosomal protein S13, chloroplastic [Se... 283 3e-95
ref|XP_012854991.1| PREDICTED: 30S ribosomal protein S13, chloro... 271 7e-91
gb|KZV50921.1| hypothetical protein F511_10492 [Dorcoceras hygro... 268 1e-89
gb|PIN19032.1| Ribosomal protein S18 [Handroanthus impetiginosus] 262 4e-87
ref|XP_022852452.1| 30S ribosomal protein S13, chloroplastic-lik... 259 5e-86
ref|XP_022894790.1| 30S ribosomal protein S13, chloroplastic-lik... 256 9e-85
gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea] 251 9e-83
ref|XP_016556624.1| PREDICTED: 30S ribosomal protein S13, chloro... 249 7e-82
ref|XP_019180048.1| PREDICTED: 30S ribosomal protein S13, chloro... 247 3e-81
gb|PON67785.1| Ribosomal protein [Trema orientalis] 247 9e-81
ref|XP_016493236.1| PREDICTED: 30S ribosomal protein S13, chloro... 245 2e-80
ref|XP_019257041.1| PREDICTED: 30S ribosomal protein S13, chloro... 245 2e-80
ref|XP_009795656.1| PREDICTED: 30S ribosomal protein S13, chloro... 244 5e-80
ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloro... 243 2e-79
gb|PON76610.1| Ribosomal protein [Parasponia andersonii] 244 3e-79
ref|XP_016505622.1| PREDICTED: 30S ribosomal protein S13, chloro... 242 4e-79
ref|XP_024018129.1| 30S ribosomal protein S13, chloroplastic iso... 241 6e-79
ref|XP_017234181.1| PREDICTED: 30S ribosomal protein S13, chloro... 239 3e-78
ref|NP_001316443.1| 30S ribosomal protein S13 [Solanum lycopersi... 239 6e-78
gb|KVI04771.1| Ribosomal protein S13 [Cynara cardunculus var. sc... 238 1e-77
>ref|XP_011097646.1| 30S ribosomal protein S13, chloroplastic [Sesamum indicum]
Length = 166
Score = 283 bits (723), Expect = 3e-95
Identities = 142/162 (87%), Positives = 145/162 (89%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV KTSL FPL++ LPKIGGLSIKCARVGGVEIPNNKRVEYSL
Sbjct: 5 LATPVLPSLSLISNPISNSAKTSLSFPLTTTLPKIGGLSIKCARVGGVEIPNNKRVEYSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRTAARQILNDLGFENK+TKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTAARQILNDLGFENKITKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 488
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 166
>ref|XP_012854991.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Erythranthe
guttata]
gb|EYU22910.1| hypothetical protein MIMGU_mgv1a015166mg [Erythranthe guttata]
Length = 166
Score = 271 bits (694), Expect = 7e-91
Identities = 136/162 (83%), Positives = 141/162 (87%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV K S+ FPLS++LPKIGGLSIKCARVGGVEIPNNKRVEYSL
Sbjct: 5 LATPVLPSLSLISNSISLSPKNSIFFPLSTSLPKIGGLSIKCARVGGVEIPNNKRVEYSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRTAARQILNDL FENK+TKDFSEEELT LR+EVSKY IEGDLRRFN LAIRRL
Sbjct: 65 QYIHGIGRTAARQILNDLSFENKITKDFSEEELTILRDEVSKYKIEGDLRRFNGLAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 488
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 166
>gb|KZV50921.1| hypothetical protein F511_10492 [Dorcoceras hygrometricum]
Length = 166
Score = 268 bits (686), Expect = 1e-89
Identities = 135/162 (83%), Positives = 141/162 (87%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV KTSL FPL ++LPKIGGL+IKCARVGGVEIPNNKR+EYSL
Sbjct: 5 LATPVVPSLSLISNPISTSSKTSLSFPLITSLPKIGGLTIKCARVGGVEIPNNKRIEYSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRT ++QIL DL FENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTLSKQILVDLSFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 488
KEIQCYRGVRH QGLPCRGQRTKNNCRTLKGKRVAIPGKKKK
Sbjct: 125 KEIQCYRGVRHSQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 166
>gb|PIN19032.1| Ribosomal protein S18 [Handroanthus impetiginosus]
Length = 164
Score = 262 bits (669), Expect = 4e-87
Identities = 128/142 (90%), Positives = 134/142 (94%)
Frame = +3
Query: 63 KTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTAARQILNDLGF 242
K S+ FP S+ LPKIGGLSI+CARVGGVEIPNNKRVEYSLQYIHGIGRT ARQILNDL F
Sbjct: 23 KVSVSFPRSTILPKIGGLSIRCARVGGVEIPNNKRVEYSLQYIHGIGRTTARQILNDLDF 82
Query: 243 ENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQ 422
ENK+TKDF+EE+LT LR EVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQ
Sbjct: 83 ENKLTKDFTEEDLTALRAEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQ 142
Query: 423 RTKNNCRTLKGKRVAIPGKKKK 488
RTKNNCRTLKGKRVAIPGKKKK
Sbjct: 143 RTKNNCRTLKGKRVAIPGKKKK 164
>ref|XP_022852452.1| 30S ribosomal protein S13, chloroplastic-like [Olea europaea var.
sylvestris]
Length = 166
Score = 259 bits (662), Expect = 5e-86
Identities = 129/162 (79%), Positives = 137/162 (84%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
L TPV K+S+ FPL S+LPKIGGLSIKC RVGGVEIPNNKRV YSL
Sbjct: 5 LLTPVLPSLSLISNPISTSLKSSISFPLPSSLPKIGGLSIKCVRVGGVEIPNNKRVAYSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHG+GRT A+QIL DL ENK+T+D SEEELTTLREEVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGVGRTRAKQILVDLSMENKITRDLSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 488
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK+
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKR 166
>ref|XP_022894790.1| 30S ribosomal protein S13, chloroplastic-like [Olea europaea var.
sylvestris]
Length = 166
Score = 256 bits (654), Expect = 9e-85
Identities = 127/162 (78%), Positives = 135/162 (83%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
+ TPV K S+ PL ++LPKIGGLSIKC RVGGVEIPNNKRVEYSL
Sbjct: 5 ILTPVLPSASLISNPLSTSLKNSISLPLPTSLPKIGGLSIKCVRVGGVEIPNNKRVEYSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHG+GRT A+QIL DL ENK+TKD SEEELTTLREEVS YMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGVGRTRAKQILCDLSMENKITKDLSEEELTTLREEVSNYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKK 488
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK+
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKKR 166
>gb|EPS72074.1| hypothetical protein M569_02688 [Genlisea aurea]
Length = 158
Score = 251 bits (640), Expect = 9e-83
Identities = 121/134 (90%), Positives = 129/134 (96%)
Frame = +3
Query: 87 SSALPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTAARQILNDLGFENKVTKDF 266
SS+ PK+GGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRT +RQILNDL +NK+TKD
Sbjct: 25 SSSFPKVGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTNSRQILNDLNLDNKLTKDL 84
Query: 267 SEEELTTLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRT 446
SEEELT+LR+EVSKYMIEGDLRRFNALAIRRLKEIQCYRG+RHIQGLPCRGQRTKNNCRT
Sbjct: 85 SEEELTSLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGMRHIQGLPCRGQRTKNNCRT 144
Query: 447 LKGKRVAIPGKKKK 488
LKGKRVAIPGKKKK
Sbjct: 145 LKGKRVAIPGKKKK 158
>ref|XP_016556624.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Capsicum
annuum]
Length = 168
Score = 249 bits (635), Expect = 7e-82
Identities = 125/161 (77%), Positives = 133/161 (82%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV +SL FP ++ PK+GGLSIKC RVGGVEIPNNKRVE+SL
Sbjct: 5 LATPVLPSLSLISNIPSISNHSSLYFPTPTSFPKVGGLSIKCVRVGGVEIPNNKRVEFSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRT ARQIL DL ENK+ KDFSEEEL TLR+EVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTTARQILVDLQMENKIMKDFSEEELITLRDEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK 485
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAI GKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 165
>ref|XP_019180048.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Ipomoea
nil]
Length = 168
Score = 247 bits (631), Expect = 3e-81
Identities = 119/141 (84%), Positives = 133/141 (94%)
Frame = +3
Query: 63 KTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTAARQILNDLGF 242
KTSL FP+S++ PKIGGLSIKC RVGGVEIPNNKRVEYSLQYIHG+GR+ ARQIL+D+G
Sbjct: 26 KTSLSFPISTS-PKIGGLSIKCVRVGGVEIPNNKRVEYSLQYIHGVGRSRARQILSDIGM 84
Query: 243 ENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQ 422
+NK+TK+ S+EEL TLR+EVSKYMIEGDLRRFNALAIRRLKEIQCYRG+RHIQGLPCRGQ
Sbjct: 85 DNKITKELSQEELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQ 144
Query: 423 RTKNNCRTLKGKRVAIPGKKK 485
RTKNNCRTLKGK+VAI GKKK
Sbjct: 145 RTKNNCRTLKGKKVAIAGKKK 165
>gb|PON67785.1| Ribosomal protein [Trema orientalis]
Length = 201
Score = 247 bits (631), Expect = 9e-81
Identities = 120/138 (86%), Positives = 130/138 (94%)
Frame = +3
Query: 72 LCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTAARQILNDLGFENK 251
L FP++S PKIGGLS+KCARVGGVEIPNNKR+E+SLQYIHGIGRT AR+ILNDL ENK
Sbjct: 62 LSFPIASP-PKIGGLSVKCARVGGVEIPNNKRIEFSLQYIHGIGRTRARKILNDLSIENK 120
Query: 252 VTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQRTK 431
+TKDFSEEEL T+R+EVSKYMIEGDLRRFNALAIRRLKEIQCYRG+RHIQGLPCRGQRTK
Sbjct: 121 LTKDFSEEELVTIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTK 180
Query: 432 NNCRTLKGKRVAIPGKKK 485
NNCRTLKGKRVAI GKKK
Sbjct: 181 NNCRTLKGKRVAIAGKKK 198
>ref|XP_016493236.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Nicotiana
tabacum]
Length = 168
Score = 245 bits (626), Expect = 2e-80
Identities = 124/161 (77%), Positives = 132/161 (81%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV SL F ++ PKIGGLSIKC RVGGVEIPNNKRVE++L
Sbjct: 5 LATPVLPSLSLICNTSAISKHNSLSFSTPTSFPKIGGLSIKCVRVGGVEIPNNKRVEFAL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRT+ARQIL DL ENK+ KDFSEEEL TLR+EVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK 485
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAI GKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 165
>ref|XP_019257041.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Nicotiana
attenuata]
gb|OIS95997.1| 30s ribosomal protein s13, chloroplastic [Nicotiana attenuata]
Length = 168
Score = 245 bits (625), Expect = 2e-80
Identities = 124/161 (77%), Positives = 132/161 (81%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV SL F ++ PKIGGLSIKC RVGGVEIPNNKRVE++L
Sbjct: 5 LATPVLPSLSLICNTSAISKYNSLSFSTPTSFPKIGGLSIKCVRVGGVEIPNNKRVEFAL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRT+ARQIL DL ENK+ KDFSEEEL TLR+EVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK 485
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAI GKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 165
>ref|XP_009795656.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Nicotiana
sylvestris]
Length = 168
Score = 244 bits (623), Expect = 5e-80
Identities = 124/161 (77%), Positives = 131/161 (81%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV L F ++ PKIGGLSIKC RVGGVEIPNNKRVE+SL
Sbjct: 5 LATPVLPSLSLICNTSTISKHNFLSFSTPTSFPKIGGLSIKCVRVGGVEIPNNKRVEFSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRT+ARQIL DL ENK+ KDFSEEEL TLR+EVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK 485
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAI GKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 165
>ref|XP_006355960.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Solanum
tuberosum]
Length = 168
Score = 243 bits (619), Expect = 2e-79
Identities = 124/161 (77%), Positives = 130/161 (80%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV +SL F ++ PK GGL IKC RVGGVE+PNNKRVE+SL
Sbjct: 5 LATPVLPSLSLICNTSSISKHSSLSFSTPTSFPKTGGLVIKCVRVGGVEVPNNKRVEFSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRTAARQIL DL ENKV KD SEEEL TLREEVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTAARQILVDLQMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK 485
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAI GKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 165
>gb|PON76610.1| Ribosomal protein [Parasponia andersonii]
Length = 215
Score = 244 bits (622), Expect = 3e-79
Identities = 119/138 (86%), Positives = 129/138 (93%)
Frame = +3
Query: 72 LCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTAARQILNDLGFENK 251
L FP++S KIGGLS+KCARVGGVEIPNNKR+E+SLQYIHGIGRT AR+ILNDL ENK
Sbjct: 76 LFFPIASP-SKIGGLSVKCARVGGVEIPNNKRIEFSLQYIHGIGRTRARKILNDLSIENK 134
Query: 252 VTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQRTK 431
+TKDFSEEEL T+R+EVSKYMIEGDLRRFNALAIRRLKEIQCYRG+RHIQGLPCRGQRTK
Sbjct: 135 LTKDFSEEELVTIRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQRTK 194
Query: 432 NNCRTLKGKRVAIPGKKK 485
NNCRTLKGKRVAI GKKK
Sbjct: 195 NNCRTLKGKRVAIAGKKK 212
>ref|XP_016505622.1| PREDICTED: 30S ribosomal protein S13, chloroplastic-like [Nicotiana
tabacum]
Length = 168
Score = 242 bits (617), Expect = 4e-79
Identities = 122/161 (75%), Positives = 130/161 (80%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV L F ++ PKIGGLS+ C RVGGVEIPNNKRVE+SL
Sbjct: 5 LATPVLPSLSLICNTSAISKHNFLSFSTPTSFPKIGGLSVNCVRVGGVEIPNNKRVEFSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRT+ARQIL DL ENK+ KDFSEEEL TLR+EVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTSARQILVDLQIENKIMKDFSEEELITLRDEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK 485
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAI GKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 165
>ref|XP_024018129.1| 30S ribosomal protein S13, chloroplastic isoform X1 [Morus
notabilis]
Length = 169
Score = 241 bits (616), Expect = 6e-79
Identities = 115/138 (83%), Positives = 129/138 (93%)
Frame = +3
Query: 72 LCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTAARQILNDLGFENK 251
L FP ++ L +IGGLS+KCARVGGVEIPNNKR+E+SLQY+HGIGRT+AR+ILNDL ENK
Sbjct: 29 LSFPTTNPLQEIGGLSVKCARVGGVEIPNNKRIEFSLQYVHGIGRTSARKILNDLSMENK 88
Query: 252 VTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQRTK 431
+TKDFSE+EL LR+EVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHI+GLPCRGQRTK
Sbjct: 89 LTKDFSEDELIILRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIKGLPCRGQRTK 148
Query: 432 NNCRTLKGKRVAIPGKKK 485
NNCRTLKGK+VAI GKKK
Sbjct: 149 NNCRTLKGKKVAIAGKKK 166
>ref|XP_017234181.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Daucus carota
subsp. sativus]
gb|KZN10160.1| hypothetical protein DCAR_002816 [Daucus carota subsp. sativus]
Length = 169
Score = 239 bits (611), Expect = 3e-78
Identities = 118/140 (84%), Positives = 128/140 (91%)
Frame = +3
Query: 66 TSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTAARQILNDLGFE 245
TSL +P+S+ PKIGGLSI+CARVGGVEIPN KRV+YSLQYIHGIGRT A QILNDL E
Sbjct: 28 TSLSYPISTQ-PKIGGLSIRCARVGGVEIPNAKRVQYSLQYIHGIGRTRALQILNDLKME 86
Query: 246 NKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQR 425
NK+TKD SEEEL TLR+EVSKYMIEGDLRRFNAL IRRLKEIQCYRG+RHIQGLPCRGQR
Sbjct: 87 NKITKDLSEEELITLRDEVSKYMIEGDLRRFNALNIRRLKEIQCYRGIRHIQGLPCRGQR 146
Query: 426 TKNNCRTLKGKRVAIPGKKK 485
TKNNCRTLKGK++AI GKKK
Sbjct: 147 TKNNCRTLKGKKIAIAGKKK 166
>ref|NP_001316443.1| 30S ribosomal protein S13 [Solanum lycopersicum]
ref|XP_015076871.1| PREDICTED: 30S ribosomal protein S13, chloroplastic [Solanum
pennellii]
Length = 168
Score = 239 bits (609), Expect = 6e-78
Identities = 122/161 (75%), Positives = 128/161 (79%)
Frame = +3
Query: 3 LATPVXXXXXXXXXXXXXXXKTSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSL 182
LATPV +SL F ++ PK GL IKC RVGGVE+PNNKRVE+SL
Sbjct: 5 LATPVLPSLSLICNTSSISKHSSLSFSTPTSFPKTAGLVIKCVRVGGVEVPNNKRVEFSL 64
Query: 183 QYIHGIGRTAARQILNDLGFENKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRL 362
QYIHGIGRT ARQIL DL ENKV KD SEEEL TLREEVSKYMIEGDLRRFNALAIRRL
Sbjct: 65 QYIHGIGRTTARQILVDLQMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRRL 124
Query: 363 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKRVAIPGKKK 485
KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGK+VAI GKKK
Sbjct: 125 KEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKK 165
>gb|KVI04771.1| Ribosomal protein S13 [Cynara cardunculus var. scolymus]
Length = 169
Score = 238 bits (607), Expect = 1e-77
Identities = 117/140 (83%), Positives = 127/140 (90%)
Frame = +3
Query: 66 TSLCFPLSSALPKIGGLSIKCARVGGVEIPNNKRVEYSLQYIHGIGRTAARQILNDLGFE 245
TSL F + PK+GGLSI+CARVGGVEIPNNKRV+YSLQYIHGIGRT A +ILNDL E
Sbjct: 28 TSLSFSTFNP-PKVGGLSIRCARVGGVEIPNNKRVQYSLQYIHGIGRTRALEILNDLKME 86
Query: 246 NKVTKDFSEEELTTLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQR 425
NK+TKD SEEEL TLR+EVSKYMIEGDLRRFNALAIRRLKEIQCYRG+RHIQGLPCRGQR
Sbjct: 87 NKITKDLSEEELITLRDEVSKYMIEGDLRRFNALAIRRLKEIQCYRGIRHIQGLPCRGQR 146
Query: 426 TKNNCRTLKGKRVAIPGKKK 485
TKNNCRTLKGK++AI GKKK
Sbjct: 147 TKNNCRTLKGKKIAIAGKKK 166