BLASTX nr result

ID: Rehmannia32_contig00005694 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00005694
         (401 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011080341.1| chaperonin-like RbcX protein 2, chloroplasti...    54   7e-06

>ref|XP_011080341.1| chaperonin-like RbcX protein 2, chloroplastic [Sesamum indicum]
          Length = 211

 Score = 53.5 bits (127), Expect = 7e-06
 Identities = 25/34 (73%), Positives = 25/34 (73%), Gaps = 4/34 (11%)
 Frame = +3

Query: 312 KTCPCLCFDALPSCNLGGGDLILQR----RKHVP 401
           K CPCLC DALPSCNL G DL LQR    RKHVP
Sbjct: 16  KACPCLCLDALPSCNLNGRDLSLQRHSIGRKHVP 49


Top