BLASTX nr result

ID: Rehmannia32_contig00005528 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00005528
         (407 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN17635.1| hypothetical protein CDL12_09702 [Handroanthus im...    54   1e-06

>gb|PIN17635.1| hypothetical protein CDL12_09702 [Handroanthus impetiginosus]
          Length = 107

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 35/72 (48%), Positives = 43/72 (59%), Gaps = 8/72 (11%)
 Frame = +2

Query: 2   PTTAYERFSKSSNEIRSPFMEQVEQTLDH--------RKMVVQIKKRLRTVPRVIPGATR 157
           PT A E   K SN+ +S  +EQ +QTLD         ++MVVQIKKR     R+IPG TR
Sbjct: 20  PTLARENIPKLSNKTKSHTLEQGKQTLDRDQPRLTNSQEMVVQIKKR----ARMIPGGTR 75

Query: 158 GSSRSSAVRGNT 193
             +RSSAVR  T
Sbjct: 76  ARTRSSAVREQT 87


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