BLASTX nr result

ID: Rehmannia32_contig00005527 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00005527
         (387 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN17635.1| hypothetical protein CDL12_09702 [Handroanthus im...    59   8e-09

>gb|PIN17635.1| hypothetical protein CDL12_09702 [Handroanthus impetiginosus]
          Length = 107

 Score = 59.3 bits (142), Expect = 8e-09
 Identities = 37/72 (51%), Positives = 46/72 (63%), Gaps = 8/72 (11%)
 Frame = +1

Query: 1   PTTAYERISKSSNEIRSPFMEQGEQTLDH--------RKMVVQIKKRLRTVPRVIPGATR 156
           PT A E I K SN+ +S  +EQG+QTLD         ++MVVQIKKR     R+IPG TR
Sbjct: 20  PTLARENIPKLSNKTKSHTLEQGKQTLDRDQPRLTNSQEMVVQIKKR----ARMIPGGTR 75

Query: 157 GSSRSSAVRGKT 192
             +RSSAVR +T
Sbjct: 76  ARTRSSAVREQT 87


Top