BLASTX nr result
ID: Rehmannia32_contig00005428
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00005428
(733 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygro... 381 e-130
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei... 371 e-123
dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subt... 292 6e-89
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera] 295 8e-89
gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposo... 279 3e-88
gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo... 290 4e-88
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo... 282 6e-88
gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposo... 273 5e-86
dbj|GAU10233.1| hypothetical protein TSUD_417410 [Trifolium subt... 281 7e-85
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 283 2e-84
gb|PNX96445.1| copia LTR rider [Trifolium pratense] 281 1e-83
gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposo... 273 3e-83
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera] 271 5e-80
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera] 271 5e-80
gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposo... 258 6e-80
gb|ABO36622.1| copia LTR rider [Solanum lycopersicum] >gi|133711... 270 2e-79
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 269 2e-79
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 269 3e-79
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 269 3e-79
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa] 266 3e-78
>gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygrometricum]
Length = 345
Score = 381 bits (979), Expect = e-130
Identities = 177/215 (82%), Positives = 196/215 (91%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
PTQGGNRYFLSIIDDFSRKVWVFL+KNKSDVF+ FKNWK L ENQTGK+IKTLRTDNGLE
Sbjct: 118 PTQGGNRYFLSIIDDFSRKVWVFLLKNKSDVFDSFKNWKTLTENQTGKKIKTLRTDNGLE 177
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
FCN+LFD LC + GIKRHKT PYTPQQNGV ERMNRTLLERVRSML SSGLSK+FWGE V
Sbjct: 178 FCNSLFDELCEQCGIKRHKTNPYTPQQNGVVERMNRTLLERVRSMLVSSGLSKKFWGECV 237
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
TAA+LINRSPSVPL GKCPESV+SGKEID+S+L+ FGC AF H++GDKLEPR+ KCVFL
Sbjct: 238 LTAAFLINRSPSVPLDGKCPESVWSGKEIDYSHLRTFGCTAFAHKRGDKLEPRAVKCVFL 297
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNESEFP 87
GYPEGVKGYRLW+R EPGF+ ++SRDV FNE+EFP
Sbjct: 298 GYPEGVKGYRLWVRSEPGFRTIVSRDVTFNETEFP 332
>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
1-94 [Erythranthe guttata]
Length = 598
Score = 371 bits (952), Expect = e-123
Identities = 181/242 (74%), Positives = 208/242 (85%), Gaps = 1/242 (0%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
PT GGNRYFLSIIDD+SRKV+VFL+K KSDVF+KFK WK LIENQTGKRIKTLRTDNG+E
Sbjct: 220 PTYGGNRYFLSIIDDYSRKVFVFLLKQKSDVFDKFKTWKTLIENQTGKRIKTLRTDNGIE 279
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
FCN FDNLCA GI+RHK+V +TPQQNGVAERMNRTLLERVRSML SSGL K FWGEA+
Sbjct: 280 FCNLEFDNLCANSGIRRHKSVVHTPQQNGVAERMNRTLLERVRSMLTSSGLPKLFWGEAI 339
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
TA YLINRSPS+PL G PESV+ GK++D SNL VFG AAFVH KGDKLEPR KC+FL
Sbjct: 340 LTATYLINRSPSMPLNGDLPESVWCGKKVDLSNLHVFGYAAFVHHKGDKLEPRFVKCIFL 399
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCL-TPSLPLCESEPAPNKVEQIPVS 15
GYP+GVKGYRLWL+G+ G+KI+ISRDVIFNES FPCL P++ + +S PN+VEQ+P+
Sbjct: 400 GYPDGVKGYRLWLKGDFGYKIIISRDVIFNESGFPCLAVPNVVIPQS--TPNEVEQLPIK 457
Query: 14 SN 9
S+
Sbjct: 458 SD 459
>dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subterraneum]
Length = 1006
Score = 292 bits (748), Expect = 6e-89
Identities = 139/212 (65%), Positives = 165/212 (77%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
PT GG YFLSIIDD+SR+VWV ++KNKSDVFEKFK W LIENQ G ++K LRTDNGLE
Sbjct: 316 PTHGGGSYFLSIIDDYSRRVWVHIIKNKSDVFEKFKEWHTLIENQIGTKLKVLRTDNGLE 375
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
F + F+ C + GIKRH+TV YTPQQNG+AERMNRTLLERVR ML +GL K FWGEAV
Sbjct: 376 FVSEQFNEFCRKKGIKRHRTVAYTPQQNGLAERMNRTLLERVRYMLLGAGLPKSFWGEAV 435
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
+TAAYLINR PS + K P V+SGK D+S LK+FG AF H K DKL+ R+ KCVF+
Sbjct: 436 NTAAYLINRCPSAGIDLKTPMEVWSGKPADYSKLKIFGALAFAHVKQDKLDDRAVKCVFI 495
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNES 96
GYP+GVKGY+LW G+ G K +ISRDV F+E+
Sbjct: 496 GYPDGVKGYKLWKMGQGGSKFIISRDVTFDET 527
>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
Length = 1208
Score = 295 bits (754), Expect = 8e-89
Identities = 137/220 (62%), Positives = 174/220 (79%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
P+ GG RYFL++IDD+SRKVW++ +KNKS+ F KFK WKIL+E QT +++K LRTDNGLE
Sbjct: 464 PSIGGARYFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLE 523
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
F +N F++LC + GI RH+TV YTPQQNG+AERMNRT+LERVR ML+SSGLSK FW EA
Sbjct: 524 FLSNDFNSLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAA 583
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
TA +LINRSPS L+ K P+ ++GK D+ +LKVFGC A+VH K DKLEPR+ KC+FL
Sbjct: 584 ETAVHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFL 643
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCLTPS 72
GYP+GVKGY+LW+ + K +ISRDV FNE + TP+
Sbjct: 644 GYPKGVKGYKLWIETQGKGKCIISRDVTFNEQDMSKQTPA 683
>gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 516
Score = 279 bits (714), Expect = 3e-88
Identities = 131/213 (61%), Positives = 164/213 (76%), Gaps = 1/213 (0%)
Frame = -3
Query: 728 TQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEF 549
+ GG RYFLSI+DDFSRKVWV+ +K K++VF++FK WK+L+E Q G+ +K LRTDNGLEF
Sbjct: 35 SHGGARYFLSIVDDFSRKVWVYFLKQKNEVFDRFKEWKVLVETQIGRNLKKLRTDNGLEF 94
Query: 548 CNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVH 369
C+ F C E G+ RHKTV TPQ+NG+ ER NRT+LERVR ML +GL K FW EAV
Sbjct: 95 CDEKFSKFCRENGVARHKTVRGTPQKNGLVERFNRTILERVRCMLNHAGLPKSFWAEAVS 154
Query: 368 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLG 189
+A Y INR PS L+ K P+ V+SG+++D+S L+VFGC A+ H K DKLEPR+ K +F+G
Sbjct: 155 SAVYCINRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIFIG 214
Query: 188 YPEGVKGYRLWLRGEPGF-KILISRDVIFNESE 93
YPEGVKGYRLW EPG+ K LISRDV+FNE E
Sbjct: 215 YPEGVKGYRLWCL-EPGYKKCLISRDVVFNEIE 246
>gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Dendrobium catenatum]
Length = 993
Score = 290 bits (742), Expect = 4e-88
Identities = 140/240 (58%), Positives = 173/240 (72%)
Frame = -3
Query: 728 TQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEF 549
T GGNRYFLS IDD+SRKVW+FL+K+K + F KF WK ++ENQ +++K LRTDNGLEF
Sbjct: 434 THGGNRYFLSFIDDYSRKVWIFLLKSKDETFSKFLEWKSMVENQKNRKLKVLRTDNGLEF 493
Query: 548 CNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVH 369
CN F+ C++ GI RHKTV +TPQQNG+AERMNRTLL+RVR +L SSGLSK FWGEA+
Sbjct: 494 CNESFNKFCSDSGIVRHKTVSHTPQQNGLAERMNRTLLDRVRCLLFSSGLSKFFWGEALS 553
Query: 368 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLG 189
TA YL+NR+PS + K P+ ++ GK ++L+VFGC A+ HQ KLEPRS KCVFLG
Sbjct: 554 TACYLVNRTPSSAINFKTPQELWKGKPPSLTHLRVFGCLAYPHQNKGKLEPRSIKCVFLG 613
Query: 188 YPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCLTPSLPLCESEPAPNKVEQIPVSSN 9
YP GVKGYRLW PG K +ISRDVIFNE+ L + ESE + I S +
Sbjct: 614 YPTGVKGYRLWDLSSPGVKTIISRDVIFNENR-------LYISESENKDTTISSIENSDS 666
>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
partial [Cajanus cajan]
Length = 634
Score = 282 bits (721), Expect = 6e-88
Identities = 133/213 (62%), Positives = 166/213 (77%), Gaps = 1/213 (0%)
Frame = -3
Query: 728 TQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEF 549
+ GG RYFLSI+DDFSRKVWV+ +K K++VF++FK WK+L+E QTG+ +K LRTDNGLEF
Sbjct: 153 SHGGARYFLSIVDDFSRKVWVYFLKQKNEVFDRFKEWKVLVETQTGRNLKKLRTDNGLEF 212
Query: 548 CNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVH 369
C+ F C E G+ RHKTV TPQ+NG+AER NRT+LERVR ML +GL K FW EAV
Sbjct: 213 CDEKFSKFCRENGVARHKTVRGTPQKNGLAERFNRTILERVRCMLNHAGLPKSFWVEAVS 272
Query: 368 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLG 189
+A Y INR PS L+ K P+ V+SG+++D+S L+VFGC A+ H K DKLEPR+ K +F+G
Sbjct: 273 SAVYCINRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIFIG 332
Query: 188 YPEGVKGYRLWLRGEPGF-KILISRDVIFNESE 93
YPEGVKGYRLW EPG+ K LISRDV+FNE E
Sbjct: 333 YPEGVKGYRLWCL-EPGYKKCLISRDVVFNEIE 364
>gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 498
Score = 273 bits (698), Expect = 5e-86
Identities = 127/216 (58%), Positives = 164/216 (75%)
Frame = -3
Query: 728 TQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEF 549
T GG YFL+IIDDF+R+VW++++K+K++ ++KF++W LI+NQ ++K LRTDNGLEF
Sbjct: 88 TLGGGSYFLTIIDDFTRRVWLYVLKDKTETYKKFRDWYTLIQNQLETKLKVLRTDNGLEF 147
Query: 548 CNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVH 369
+ F C GIKRH+TVP+TPQQNG+AERMNRT+LERVR ML SGLSK+FWGEA
Sbjct: 148 LSEQFAEFCRNQGIKRHRTVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAAT 207
Query: 368 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLG 189
TAAYLINR PS L K P + GK +D+SNL+VFG A+ H K KLEPR+ KCVF+G
Sbjct: 208 TAAYLINRCPSSALNNKTPMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIG 267
Query: 188 YPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCL 81
YP+GVKGY+LW + G K +ISRDV F+E++ L
Sbjct: 268 YPDGVKGYKLWKLEKGGGKCIISRDVTFDETKLGIL 303
>dbj|GAU10233.1| hypothetical protein TSUD_417410 [Trifolium subterraneum]
Length = 987
Score = 281 bits (719), Expect = 7e-85
Identities = 135/212 (63%), Positives = 160/212 (75%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
PT GG YFLSIIDD+SR+VWV ++KNKSD FEKFK W LIENQ G ++K LRT+NGL+
Sbjct: 568 PTHGGGSYFLSIIDDYSRRVWVHIIKNKSDAFEKFKEWHTLIENQIGTKLKVLRTNNGLK 627
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
F + F+ C + GIKRH+TV YTPQQNG+AERMNRTLLERVR ML +GL K FWGEAV
Sbjct: 628 FVSEQFNEFCRKKGIKRHRTVAYTPQQNGLAERMNRTLLERVRCMLLGAGLPKSFWGEAV 687
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
+TAAYLINR PS + K P V+S K D+SNLK+FG AF K DKL+ R KCVF+
Sbjct: 688 NTAAYLINRCPSTGIDLKTPMEVWSDKPTDYSNLKIFGALAFARVKQDKLDARVVKCVFI 747
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNES 96
GYP GVKGY+LW G G K +ISRDV F+E+
Sbjct: 748 GYPNGVKGYKLWKMGPGGSKFIISRDVTFDET 779
>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
Length = 1309
Score = 283 bits (725), Expect = 2e-84
Identities = 131/214 (61%), Positives = 166/214 (77%)
Frame = -3
Query: 728 TQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEF 549
++GG RY++S+IDD+SRK+WV +K+K + F+ FK+WK+++E QTGK+IK LRTDNGLE+
Sbjct: 486 SRGGARYYISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMMVETQTGKKIKKLRTDNGLEY 545
Query: 548 CNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVH 369
C+ F + C + GI RH TVP TPQQNG+AERMNRT+LERVR MLA SGL + FW EAV
Sbjct: 546 CSTEFKDFCKQEGIVRHYTVPNTPQQNGLAERMNRTILERVRCMLADSGLPRMFWAEAVV 605
Query: 368 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLG 189
TA+YLINR PS L+ K P+ V++G DFSNL+ FGC AF H + DKL+PR+KKCV LG
Sbjct: 606 TASYLINRCPSTALEFKTPQEVWTGHRPDFSNLRAFGCTAFAHIRQDKLQPRAKKCVLLG 665
Query: 188 YPEGVKGYRLWLRGEPGFKILISRDVIFNESEFP 87
YPE VKGY+LW + LISRDV+FNE EFP
Sbjct: 666 YPENVKGYKLWCIETGEERCLISRDVVFNEEEFP 699
>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
Length = 1318
Score = 281 bits (719), Expect = 1e-83
Identities = 134/214 (62%), Positives = 160/214 (74%), Gaps = 1/214 (0%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
P+ G RYFLSI+DD+SRK+WVF+ K K + FE FK+WK L+ENQTG+++K LRTDNGLE
Sbjct: 485 PSHSGARYFLSIVDDYSRKLWVFIQKTKDETFENFKSWKTLVENQTGRKVKRLRTDNGLE 544
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
FCN FD CA GI RH+T TPQQNG+AER NRT+LERVR ML S+GL K FW EAV
Sbjct: 545 FCNEAFDIFCAASGIARHRTTAGTPQQNGLAERFNRTILERVRCMLTSAGLKKVFWAEAV 604
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
TA YLINR PS L K PE V+SG D L+VFGC A+ H + DK+EPR+ KC+F+
Sbjct: 605 STATYLINRCPSTALDMKTPEEVWSGHPPDLDKLRVFGCVAYAHIRQDKVEPRALKCMFM 664
Query: 191 GYPEGVKGYRLWLRGEPGFK-ILISRDVIFNESE 93
GYPEGVK YRLW EPG K + SRDV+FNE+E
Sbjct: 665 GYPEGVKAYRLWCL-EPGHKRCITSRDVVFNEAE 697
>gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
cajan]
Length = 780
Score = 273 bits (698), Expect = 3e-83
Identities = 127/216 (58%), Positives = 164/216 (75%)
Frame = -3
Query: 728 TQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEF 549
T GG YFL+IIDDF+R+VW++++K+K++ ++KF++W LI+NQ ++K LRTDNGLEF
Sbjct: 491 TLGGGSYFLTIIDDFTRRVWLYVLKDKTETYKKFRDWYTLIQNQLETKLKVLRTDNGLEF 550
Query: 548 CNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVH 369
+ F C GIKRH+TVP+TPQQNG+AERMNRT+LERVR ML SGLSK+FWGEA
Sbjct: 551 LSEQFAEFCRNQGIKRHRTVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAAT 610
Query: 368 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLG 189
TAAYLINR PS L K P + GK +D+SNL+VFG A+ H K KLEPR+ KCVF+G
Sbjct: 611 TAAYLINRCPSSALNNKTPMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIG 670
Query: 188 YPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCL 81
YP+GVKGY+LW + G K +ISRDV F+E++ L
Sbjct: 671 YPDGVKGYKLWKLEKGGGKCIISRDVTFDETKLGIL 706
>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
Length = 1562
Score = 271 bits (694), Expect = 5e-80
Identities = 126/211 (59%), Positives = 159/211 (75%)
Frame = -3
Query: 728 TQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEF 549
+ G RY+++ IDDFSRKVWV+ +K K +VF KFK WK ++E +TGK +KTLRTDNGLEF
Sbjct: 606 SHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEF 665
Query: 548 CNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVH 369
CN FD C + GI RH+TV +TPQQNGVAERMN+TL++R R M +GLSK+FW EAV+
Sbjct: 666 CNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVN 725
Query: 368 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLG 189
TAAYL+NRSPS + K P+ V+SGK ++S LK+FGC A+ H KLEPR+ KC+FLG
Sbjct: 726 TAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLG 785
Query: 188 YPEGVKGYRLWLRGEPGFKILISRDVIFNES 96
Y GVKGYRLW + K +ISRDV F+ES
Sbjct: 786 YATGVKGYRLWCTEDRTPKFIISRDVTFDES 816
>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
Length = 1643
Score = 271 bits (694), Expect = 5e-80
Identities = 126/211 (59%), Positives = 159/211 (75%)
Frame = -3
Query: 728 TQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEF 549
+ G RY+++ IDDFSRKVWV+ +K K +VF KFK WK ++E +TGK +KTLRTDNGLEF
Sbjct: 819 SHSGCRYYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEF 878
Query: 548 CNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVH 369
CN FD C + GI RH+TV +TPQQNGVAERMN+TL++R R M +GLSK+FW EAV+
Sbjct: 879 CNKDFDEFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVN 938
Query: 368 TAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLG 189
TAAYL+NRSPS + K P+ V+SGK ++S LK+FGC A+ H KLEPR+ KC+FLG
Sbjct: 939 TAAYLVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLG 998
Query: 188 YPEGVKGYRLWLRGEPGFKILISRDVIFNES 96
Y GVKGYRLW + K +ISRDV F+ES
Sbjct: 999 YATGVKGYRLWCTEDRTPKFIISRDVTFDES 1029
>gb|KYP38864.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 507
Score = 258 bits (658), Expect = 6e-80
Identities = 131/236 (55%), Positives = 165/236 (69%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
P+ GG RYFLSIIDD+SR W+F+ K+K+ F+ FK WKIL+E QT KR+K LRTDNGLE
Sbjct: 117 PSLGGGRYFLSIIDDYSRMTWIFITKHKNQAFKCFKEWKILMEKQTSKRVKRLRTDNGLE 176
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
FC+ F++ C GI R TV TPQQNGVAERMNRTLLER R +L+++GLS+ FW EAV
Sbjct: 177 FCSKEFNDYCKAEGIARQYTVRNTPQQNGVAERMNRTLLERARCLLSNAGLSRSFWAEAV 236
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
T YLINRSPS + K P V+S K ++S L+VFGC A+ H KLEPRSKK +F+
Sbjct: 237 STTCYLINRSPSTIIDCKTPIEVWSNKPANYSLLRVFGCNAYYHVNEGKLEPRSKKGLFM 296
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCLTPSLPLCESEPAPNKVEQI 24
GY +GVKGYR+W E K+++SRDVIF+ES PSL S ++Q+
Sbjct: 297 GYGDGVKGYRIWSPAER--KVILSRDVIFDESHL--FYPSLEFTVSGKNQKILKQV 348
>gb|ABO36622.1| copia LTR rider [Solanum lycopersicum]
gb|ABO36636.1| copia LTR rider [Solanum lycopersicum]
Length = 1307
Score = 270 bits (689), Expect = 2e-79
Identities = 127/209 (60%), Positives = 163/209 (77%)
Frame = -3
Query: 722 GGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLEFCN 543
GG R+F+SIIDD+SR WV++MK+KS+ F+KFK WKIL+ENQTGK+IK LRTDNGLEFC
Sbjct: 487 GGCRFFVSIIDDYSRMTWVYMMKHKSEAFQKFKEWKILMENQTGKKIKRLRTDNGLEFCW 546
Query: 542 NLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAVHTA 363
+ FD C + GI RH+TV TPQQNGVAERMN+TLLER R ML+++GL +RFW EAV TA
Sbjct: 547 SEFDQFCKDEGIARHRTVRNTPQQNGVAERMNQTLLERARCMLSNAGLDRRFWAEAVSTA 606
Query: 362 AYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFLGYP 183
YLINR P ++ K P ++SGK D+SNLK FGC A+ H KLEPR+KK VF+GY
Sbjct: 607 CYLINRGPHTGIQCKTPMEMWSGKAADYSNLKAFGCTAYYHVSEGKLEPRAKKGVFVGYG 666
Query: 182 EGVKGYRLWLRGEPGFKILISRDVIFNES 96
+GVKG+R+W E ++++SR+V+F+ES
Sbjct: 667 DGVKGFRIWSPAEK--RVIMSRNVVFDES 693
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 269 bits (688), Expect = 2e-79
Identities = 133/232 (57%), Positives = 166/232 (71%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
P+ GG RY L+IIDD+SRKVW + +K+K D F FKNWK++IE QT +++K LRTDNG E
Sbjct: 498 PSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGE 557
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
FC++ F++ C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA
Sbjct: 558 FCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAA 617
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
TA YLINRSPS+PL K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FL
Sbjct: 618 STACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFL 677
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCLTPSLPLCESEPAPNK 36
GY GVKGY+LW E G K +SR V+FNES T SLP SE P K
Sbjct: 678 GYGSGVKGYKLW-NPETG-KTFMSRSVVFNESVM--FTNSLP---SEHVPEK 722
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group]
gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1373
Score = 269 bits (688), Expect = 3e-79
Identities = 133/232 (57%), Positives = 166/232 (71%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
P+ GG RY L+IIDD+SRKVW + +K+K D F FKNWK++IE QT +++K LRTDNG E
Sbjct: 498 PSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGE 557
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
FC++ F++ C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA
Sbjct: 558 FCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAA 617
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
TA YLINRSPS+PL K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FL
Sbjct: 618 STACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFL 677
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCLTPSLPLCESEPAPNK 36
GY GVKGY+LW E G K +SR V+FNES T SLP SE P K
Sbjct: 678 GYGSGVKGYKLW-NPETG-KTFMSRSVVFNESVM--FTNSLP---SEHVPEK 722
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 269 bits (687), Expect = 3e-79
Identities = 132/232 (56%), Positives = 166/232 (71%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
P+ GG RY L++IDD+SRKVW + +K+K D F FKNWK++IE QT +++K LRTDNG E
Sbjct: 498 PSLGGARYMLTVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGE 557
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
FC++ F++ C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA
Sbjct: 558 FCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAA 617
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
TA YLINRSPS+PL K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FL
Sbjct: 618 STACYLINRSPSIPLNKKTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFL 677
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCLTPSLPLCESEPAPNK 36
GY GVKGY+LW E G K +SR V+FNES T SLP SE P K
Sbjct: 678 GYGSGVKGYKLW-NPETG-KTFMSRSVVFNESVM--FTNSLP---SEHVPEK 722
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa]
Length = 1335
Score = 266 bits (680), Expect = 3e-78
Identities = 132/232 (56%), Positives = 165/232 (71%)
Frame = -3
Query: 731 PTQGGNRYFLSIIDDFSRKVWVFLMKNKSDVFEKFKNWKILIENQTGKRIKTLRTDNGLE 552
P+ GG RY L+IIDD+SRKVW + +K+K D F FKNWK++IE QT +++K L TDNG E
Sbjct: 500 PSLGGARYMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLCTDNGGE 559
Query: 551 FCNNLFDNLCAEYGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLASSGLSKRFWGEAV 372
FC++ F++ C + GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++KRFW EA
Sbjct: 560 FCSHAFNDYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAA 619
Query: 371 HTAAYLINRSPSVPLKGKCPESVFSGKEIDFSNLKVFGCAAFVHQKGDKLEPRSKKCVFL 192
TA YLINRSPS+PL K P V+SG D+S LKVFGC A+ H KLEPR+ KC+FL
Sbjct: 620 STACYLINRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFL 679
Query: 191 GYPEGVKGYRLWLRGEPGFKILISRDVIFNESEFPCLTPSLPLCESEPAPNK 36
GY GVKGY+LW E G K +SR V+FNES T SLP SE P K
Sbjct: 680 GYGSGVKGYKLW-NPETG-KTFMSRSVVFNESVM--FTNSLP---SEHVPEK 724