BLASTX nr result
ID: Rehmannia32_contig00004895
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00004895
(5359 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011099129.1| DNA-directed RNA polymerase II subunit 1 [Se... 2994 0.0
gb|PIN22778.1| RNA polymerase II, large subunit [Handroanthus im... 2991 0.0
ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II su... 2971 0.0
ref|XP_011073958.1| LOW QUALITY PROTEIN: DNA-directed RNA polyme... 2955 0.0
ref|XP_016560439.1| PREDICTED: DNA-directed RNA polymerase II su... 2911 0.0
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2907 0.0
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2904 0.0
ref|XP_016440712.1| PREDICTED: DNA-directed RNA polymerase II su... 2902 0.0
ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II su... 2902 0.0
ref|XP_019228036.1| PREDICTED: DNA-directed RNA polymerase II su... 2898 0.0
ref|XP_016502102.1| PREDICTED: DNA-directed RNA polymerase II su... 2895 0.0
ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II su... 2895 0.0
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2873 0.0
ref|XP_019182613.1| PREDICTED: DNA-directed RNA polymerase II su... 2859 0.0
gb|PHT56449.1| DNA-directed RNA polymerase II subunit RPB1 [Caps... 2855 0.0
ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II su... 2850 0.0
gb|OVA15969.1| RNA polymerase II [Macleaya cordata] 2848 0.0
ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II su... 2840 0.0
ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [He... 2838 0.0
gb|PKI74424.1| hypothetical protein CRG98_005188 [Punica granatum] 2833 0.0
>ref|XP_011099129.1| DNA-directed RNA polymerase II subunit 1 [Sesamum indicum]
Length = 1848
Score = 2994 bits (7762), Expect = 0.0
Identities = 1491/1537 (97%), Positives = 1517/1537 (98%), Gaps = 2/1537 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFP+SPAEVAK+RVVQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKIRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMA+CPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADEEDPK
Sbjct: 61 DRKMKCETCMANMADCPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 747
FKQA+RIRNPKNRL+KILDACKNKSKCEGGDEIDVQGQD+ EP+KK+RGGCGAQQPKISI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTDEPVKKTRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYK+QKKKNDDPEQMPEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPKYAR
Sbjct: 181 DGMKMVAEYKIQKKKNDDPEQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGH+IKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHKIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWHQE+EKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
LESLKLK+ DFNDMY+YEIDN NWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADR+Q
Sbjct: 901 LESLKLKKADFNDMYRYEIDNANWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIATTGDNSWPLPVNI+RLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEN+GFKA
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENEGFKA 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDH 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYME-GGLDFGMTPARSPLTG 4704
LRGVTENIMLGQLAPIGTGDCAL LNEEMLKQAIEIPLPSYME GGL+FGMTPARSPLTG
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMEGGGLEFGMTPARSPLTG 1500
Query: 4705 TPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
TPYHDGMMSP+YLLSPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1501 TPYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1537
>gb|PIN22778.1| RNA polymerase II, large subunit [Handroanthus impetiginosus]
Length = 1847
Score = 2991 bits (7753), Expect = 0.0
Identities = 1486/1536 (96%), Positives = 1515/1536 (98%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFP+SPAEVAKVR+VQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADEE+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEEEPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 747
FKQA+RIRNPKNRL+KILDACKNK+KCEGGDEIDVQGQD+ EP+KKSRGGCGAQQPKISI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKAKCEGGDEIDVQGQDTDEPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYKLQKKKNDD EQ+PEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPK+AR
Sbjct: 181 DGMKMVAEYKLQKKKNDDQEQLPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPVPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDMHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWHQE+EKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQESEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVK+LIRAAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKDLIRAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
LESLKLK++DFNDMYKYEID+PNWNP+YMLPEAVEDLKTIREIRSVFDAEVQKLEADR+Q
Sbjct: 901 LESLKLKKSDFNDMYKYEIDSPNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEADRYQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIATTGDNSWPLPVNI+RLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIRRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
PDV KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVGKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINQEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKF+EN+GFKA
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFEENEGFKA 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
ENEWMLDTEGVNLLAVMCHEDVD+RRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDS 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTGDC+L LNEEMLK AIEIPLP YMEGGLDFGMTPARSPLTGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNEEMLKNAIEIPLPGYMEGGLDFGMTPARSPLTGT 1500
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSP+YLLSPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1501 PYHDGMMSPSYLLSPNLRLSPVTDAQFSPYVGGMAF 1536
>ref|XP_012831470.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Erythranthe
guttata]
gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Erythranthe guttata]
Length = 1842
Score = 2971 bits (7701), Expect = 0.0
Identities = 1482/1537 (96%), Positives = 1505/1537 (97%), Gaps = 2/1537 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADEE+PK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRLRKILDACKNK+KC+GGDEID QD+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYKLQKKK+DD +QMPEPVERKQ LSAEKVLSILKRITDEDCQLLGLNPK+AR
Sbjct: 181 DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWHQE EKGFITPGDTQVRIEKGELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
E EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQP
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
LESLKLK++DFNDMYKYEIDN NWNPNYMLPEAVEDLKTIREIRSVFDAEV KLE DRFQ
Sbjct: 901 LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLS EAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG
Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
PDVSKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
N++APKGEL DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA
Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
ENEWMLDTEGVNLLAVMCHE+VD RRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTGDCALLLNE+MLKQAIEIPLPSYMEGGL+FGMTP RSP +GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLKQAIEIPLPSYMEGGLEFGMTPGRSPHSGT 1500
Query: 4708 PYHDGMMSPNYLL-SPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNYLL SPNLRLSPVTDAQFSPYVGGMAF
Sbjct: 1501 PYHDGMMSPNYLLMSPNLRLSPVTDAQFSPYVGGMAF 1537
>ref|XP_011073958.1| LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit 1-like
[Sesamum indicum]
Length = 1843
Score = 2955 bits (7660), Expect = 0.0
Identities = 1468/1540 (95%), Positives = 1507/1540 (97%), Gaps = 5/1540 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIG----GLSDPR 378
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ET ERGKPKIG GLSD R
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIISPDEIRQMSVVHIEHGETMERGKPKIGMXICGLSDLR 60
Query: 379 LGTIDRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADE 558
LGTI +KMKCETCM+NMAECPGHFGHLELAKPMFHIGFMK VLSILRSVCFNCSKILADE
Sbjct: 61 LGTIGKKMKCETCMSNMAECPGHFGHLELAKPMFHIGFMKVVLSILRSVCFNCSKILADE 120
Query: 559 EDPKFKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQD-SEPLKKSRGGCGAQQP 735
+DPKFKQAMRIRNPKNRLRKILDACKNKSKC+GGDEIDV+GQ+ EP+KKSRGGCGAQQP
Sbjct: 121 DDPKFKQAMRIRNPKNRLRKILDACKNKSKCDGGDEIDVRGQEPDEPVKKSRGGCGAQQP 180
Query: 736 KISIDGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 915
KISIDGMKMVAEYK+QKKKNDD +QMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP
Sbjct: 181 KISIDGMKMVAEYKIQKKKNDDQDQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNP 240
Query: 916 KYARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPA 1095
KYARPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLK QERNGAPA
Sbjct: 241 KYARPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKLQERNGAPA 300
Query: 1096 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 1275
HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD
Sbjct: 301 HIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVD 360
Query: 1276 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAK 1455
FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE+GPHPPPGKTGAK
Sbjct: 361 FSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEHGPHPPPGKTGAK 420
Query: 1456 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 1635
YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM
Sbjct: 421 YIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIM 480
Query: 1636 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGI 1815
PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEV+ELM+VPKCIVSPQ+NRPVMGI
Sbjct: 481 PYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVMELMLVPKCIVSPQSNRPVMGI 540
Query: 1816 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIP 1995
VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIP
Sbjct: 541 VQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIP 600
Query: 1996 KQINLLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVG 2175
KQINLLRYSAWHQE EKG+ITPGDTQVRIEKG+LLSGTLCKK LGTSTGSLIHVIWEEVG
Sbjct: 601 KQINLLRYSAWHQETEKGYITPGDTQVRIEKGDLLSGTLCKKALGTSTGSLIHVIWEEVG 660
Query: 2176 PDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQ 2355
PDAARKFLGHTQWLVNYWLLQNAFS+GIGDTIADAATMEKINETISNAKN+VKELIRAAQ
Sbjct: 661 PDAARKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNQVKELIRAAQ 720
Query: 2356 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 2535
EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI
Sbjct: 721 EKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINI 780
Query: 2536 SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAM 2715
SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDD+GPESRGFVENSYLRGLTPQEFFFHAM
Sbjct: 781 SQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDFGPESRGFVENSYLRGLTPQEFFFHAM 840
Query: 2716 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWI 2895
GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWI
Sbjct: 841 GGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWI 900
Query: 2896 ESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEA 3075
ESQPLESLKLK++DFNDMYKYEID+ NWNP+YMLPEAVEDLKTIREIRSVFDAEVQKLEA
Sbjct: 901 ESQPLESLKLKKSDFNDMYKYEIDSTNWNPSYMLPEAVEDLKTIREIRSVFDAEVQKLEA 960
Query: 3076 DRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 3255
DR+QLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL
Sbjct: 961 DRYQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERL 1020
Query: 3256 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSL 3435
KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSL
Sbjct: 1021 KVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSL 1080
Query: 3436 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 3615
VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS
Sbjct: 1081 VAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS 1140
Query: 3616 VYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMP 3795
VYL+PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDVEFVKSYYEMP
Sbjct: 1141 VYLRPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMP 1200
Query: 3796 DEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILR 3975
DEEIDP KISPWLLR+ELNREMMVDKKLSMADIAEKINLEF+DDLTCIFNDDNAEKLILR
Sbjct: 1201 DEEIDPHKISPWLLRVELNREMMVDKKLSMADIAEKINLEFEDDLTCIFNDDNAEKLILR 1260
Query: 3976 IRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEND 4155
IRIMNDEAPKGEL DESAEDDVFLKK+ESNMLTEMALRGIPDINKVFIKN K+NKFDEN+
Sbjct: 1261 IRIMNDEAPKGELQDESAEDDVFLKKVESNMLTEMALRGIPDINKVFIKNGKVNKFDENE 1320
Query: 4156 GFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 4335
GFKAENEWMLDTEGVNLLAV CHEDVD+RRTTSNHLIEVIEVLGIEAVRKALLDELRVVI
Sbjct: 1321 GFKAENEWMLDTEGVNLLAVACHEDVDSRRTTSNHLIEVIEVLGIEAVRKALLDELRVVI 1380
Query: 4336 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 4515
SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA
Sbjct: 1381 SFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFA 1440
Query: 4516 ETDCLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSP 4695
E DCLRGVTENIMLGQLAPIGTGDC LLLNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP
Sbjct: 1441 EMDCLRGVTENIMLGQLAPIGTGDCGLLLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSP 1500
Query: 4696 LTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
+TGTPYHDGMMSP+YLLSPNLRLSPV+DAQFSPYVGGMAF
Sbjct: 1501 VTGTPYHDGMMSPSYLLSPNLRLSPVSDAQFSPYVGGMAF 1540
>ref|XP_016560439.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Capsicum annuum]
gb|PHT91022.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum annuum]
gb|PHU26901.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum chinense]
Length = 1846
Score = 2911 bits (7546), Expect = 0.0
Identities = 1445/1536 (94%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFP+SPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADEEDPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEEDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQ QD+E P++KSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQSQDTEEPVRKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH ++EKG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQ AFSIGIGDTIADAATMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK K++ F DMY YEID+PNWNP+YML EAVEDLK IREIRSVFDAEVQKLEADR Q
Sbjct: 901 LDSLKAKKSTFEDMYAYEIDDPNWNPSYMLLEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
ENEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1379
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
L+GVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LKGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPMTDAQFSPYVGGMAF 1535
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
lycopersicum]
ref|XP_015065639.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
pennellii]
Length = 1846
Score = 2907 bits (7536), Expect = 0.0
Identities = 1442/1536 (93%), Positives = 1492/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQGQD+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH ++EKG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK K+ F+DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
ENEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Solanum
tuberosum]
Length = 1839
Score = 2904 bits (7529), Expect = 0.0
Identities = 1440/1536 (93%), Positives = 1491/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVR VQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRLRK+LDACKNK+KCEGGDEIDVQG D+E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYK+QKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH ++EKG+ITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQ AFSIGIGDTIADA+TMEKINETISNAK +VKELI+AAQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK K+ F+DMY YEID+PNWNP+YMLPEAVEDLK IREIRSVFDAEVQKLEADR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAFEWV+GEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
ENEWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDH 1439
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTG C+L LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGSCSLYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVGGMAF 1535
>ref|XP_016440712.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like, partial
[Nicotiana tabacum]
Length = 1630
Score = 2902 bits (7522), Expect = 0.0
Identities = 1441/1536 (93%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK K+ F+DMY YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_009594602.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
tomentosiformis]
Length = 1846
Score = 2902 bits (7522), Expect = 0.0
Identities = 1441/1536 (93%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK K+ F+DMY YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKLTFDDMYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVM HEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_019228036.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
attenuata]
gb|OIT31005.1| dna-directed rna polymerase ii subunit 1 [Nicotiana attenuata]
Length = 1853
Score = 2898 bits (7512), Expect = 0.0
Identities = 1438/1536 (93%), Positives = 1494/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK K++ F+D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAESDY 1439
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYHDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_016502102.1| PREDICTED: DNA-directed RNA polymerase II subunit 1, partial
[Nicotiana tabacum]
Length = 1623
Score = 2895 bits (7505), Expect = 0.0
Identities = 1438/1536 (93%), Positives = 1493/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK K++ F+D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PY DGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYPDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_009776334.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nicotiana
sylvestris]
Length = 1846
Score = 2895 bits (7505), Expect = 0.0
Identities = 1438/1536 (93%), Positives = 1493/1536 (97%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVRVVQFGI+SPDEIRQMSVVHIEH ETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMK VLSILR VCFNCSKILADE+DPK
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRL+K+LDACKNK+KCEGGDEIDV+G++ E P+KKSRGGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNRLKKMLDACKNKTKCEGGDEIDVRGEEPEAPVKKSRGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYKLQKKK+DDPEQMPEPVERKQ LSAE+VLSILKR++DEDC LLGLNP+YAR
Sbjct: 181 DGMKMVAEYKLQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH ++EKG ITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGPITPGDTQVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADA+TMEKINETISNAK++VKELI+AAQEKQL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKSKVKELIKAAQEKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK K++ F+D+Y YEID+PNWNP+YMLPEA+EDLKTIREIRSVFDAEVQKL+ADR Q
Sbjct: 901 LDSLKAKKSTFDDLYAYEIDDPNWNPSYMLPEAIEDLKTIREIRSVFDAEVQKLQADRKQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA TGDNSWPLPVNI+RLVLNAQKTFK+DFRR SDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRRSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRL+REAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSK+ KFD+N+GFKA
Sbjct: 1261 NDEAPKGEL-DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1320 ETEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAE+D
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAESDY 1439
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTG CAL LNEEMLKQAIEIPLPSYMEGGL+FGMTP RSP++GT
Sbjct: 1440 LRGVTENIMLGQLAPIGTGGCALYLNEEMLKQAIEIPLPSYMEGGLEFGMTPGRSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PY DGMMSPNYLLSPN+R+SP+TDAQFSPYV MAF
Sbjct: 1500 PYPDGMMSPNYLLSPNMRMSPITDAQFSPYVDKMAF 1535
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Vitis vinifera]
Length = 1848
Score = 2873 bits (7449), Expect = 0.0
Identities = 1421/1536 (92%), Positives = 1485/1536 (96%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 747
FKQA +IRNPKNRL+KILDACKNKSKCEGGDEI+ Q DS EP+KKSRGGCGAQQPK++I
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
+GMKM+AEYK+Q+KKNDDPEQ+PEPVERKQ LSAE+VL++LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLR SAWH E+E GFITPGDTQVRIEKGELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK+K+ +F+ ++KYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADRFQ
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIATTGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDF 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTGDCAL LN++ML+ AIE+ LPSYME GLDFGMTP+RSP+TGT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQHAIELQLPSYME-GLDFGMTPSRSPITGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNYLLSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHDGMMSPNYLLSPNLRLSPITDAQFSPYVGGMAF 1535
>ref|XP_019182613.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Ipomoea nil]
Length = 1832
Score = 2859 bits (7412), Expect = 0.0
Identities = 1415/1537 (92%), Positives = 1482/1537 (96%), Gaps = 2/1537 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVR+VQFGILSPDEIRQMSVVHIEHSETTERGKPK GGLSD RLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRLVQFGILSPDEIRQMSVVHIEHSETTERGKPKPGGLSDQRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRK+KCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILR VCFNCSKILADE++PK
Sbjct: 61 DRKLKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRCVCFNCSKILADEDEPK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKN+L+KILDACKNK+KCEGGDEI++QGQDSE P+KK +GGCGAQQPKISI
Sbjct: 121 FKQAMRIRNPKNKLKKILDACKNKTKCEGGDEINLQGQDSEEPVKKPKGGCGAQQPKISI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
DGMKMVAEYKLQKKKNDDPEQMPEPVERKQ L+AEKVLSILKRI+DEDCQLLGLNPKYAR
Sbjct: 181 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQQLTAEKVLSILKRISDEDCQLLGLNPKYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAM+IRHNENLKRQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
LLRYSAWH + E G+ITPGDTQVRIEKGELLSGTLCKK+LGTS+G LIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHSDAETGYITPGDTQVRIEKGELLSGTLCKKSLGTSSGGLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQ FSIGIGDTIAD+ TME IN TIS+AKN+VKELI Q+KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADSRTMENINITISDAKNKVKELIDVYQDKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTM E+FENRVNQVLNKARDDAG+ A+KSL+ESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMAETFENRVNQVLNKARDDAGTFAEKSLAESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+ RTLPHFTKDD GPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIGRTLPHFTKDDNGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
LESLK+K++ F +MYKYEID+PNWNPNYM+P+A++DL+TIREIRSVFDAEVQKLE+DR Q
Sbjct: 901 LESLKVKKSTFENMYKYEIDDPNWNPNYMIPDAIDDLRTIREIRSVFDAEVQKLESDRLQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIA GDNSWPLPVNI+R+VLNAQKTF++DFRRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIAVNGDNSWPLPVNIQRMVLNAQKTFRIDFRRPSDMHPMEIVEAVDKLQERLKVVH 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDDYLS+EAQKNATLFFNILLRSALASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDYLSIEAQKNATLFFNILLRSALASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V+KTKERAK VQCALEYTTLRSVTQATEVWYDPDPMSTLI EDVEFVKSYYEMPDE+I
Sbjct: 1141 PEVAKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIPEDVEFVKSYYEMPDEDI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEK+NLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKVNLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN+K+ KFD N+GFKA
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNTKVQKFDMNEGFKA 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVMCHEDVDA+RTTSNHLIEVIE+LGIEAVRK+LLDELR VISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEILGIEAVRKSLLDELRAVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AE D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAEADY 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTGDCAL LNEEMLKQAIEIPLPSYM+GGL+FGMTPARSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNEEMLKQAIEIPLPSYMDGGLEFGMTPARSPISGT 1500
Query: 4708 PY-HDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PY HDG+MSP +LSPNLR+SP +DAQFSPYV GMAF
Sbjct: 1501 PYHHDGLMSP--MLSPNLRMSPSSDAQFSPYVTGMAF 1535
>gb|PHT56449.1| DNA-directed RNA polymerase II subunit RPB1 [Capsicum baccatum]
Length = 1816
Score = 2855 bits (7402), Expect = 0.0
Identities = 1417/1506 (94%), Positives = 1464/1506 (97%), Gaps = 1/1506 (0%)
Frame = +1
Query: 301 MSVVHIEHSETTERGKPKIGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF 480
MSVVHIEH ETTERGKPK GGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF
Sbjct: 1 MSVVHIEHGETTERGKPKPGGLSDPRLGTIDRKMKCETCMANMAECPGHFGHLELAKPMF 60
Query: 481 HIGFMKTVLSILRSVCFNCSKILADEEDPKFKQAMRIRNPKNRLRKILDACKNKSKCEGG 660
HIGFMK VLSILR VCFNCSKILADEEDPKFKQAMRIRNPKNRLRK+LDACKNK+KCEGG
Sbjct: 61 HIGFMKPVLSILRCVCFNCSKILADEEDPKFKQAMRIRNPKNRLRKMLDACKNKTKCEGG 120
Query: 661 DEIDVQGQDSE-PLKKSRGGCGAQQPKISIDGMKMVAEYKLQKKKNDDPEQMPEPVERKQ 837
DEIDVQ QD+E P++KSRGGCGAQQPKISIDGMKMVAEYK+QKKK+DDPEQMPEPVERKQ
Sbjct: 121 DEIDVQSQDTEEPVRKSRGGCGAQQPKISIDGMKMVAEYKMQKKKSDDPEQMPEPVERKQ 180
Query: 838 LLSAEKVLSILKRITDEDCQLLGLNPKYARPDWMILQVLXXXXXXXXXSVMMDTSARSED 1017
LSAE+VLSILKR++DEDC LLGLNP+YARPDWMILQ L SVMMDTS+RSED
Sbjct: 181 QLSAERVLSILKRVSDEDCVLLGLNPEYARPDWMILQALPIPPPPVRPSVMMDTSSRSED 240
Query: 1018 DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHVATYFDNELPGQPRATQRSGR 1197
DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFH+ATYFDN+LPGQPRATQRSGR
Sbjct: 241 DLTHQLAMIIRHNENLKRQERNGAPAHIISEFAQLLQFHIATYFDNDLPGQPRATQRSGR 300
Query: 1198 PIKSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV 1377
PIKSICSRLK+KEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV
Sbjct: 301 PIKSICSRLKSKEGRIRGNLMGKRVDFSARTVITPDPTINIDQLGVPWSIALNLTYPETV 360
Query: 1378 TPYNIERLKELVENGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN 1557
TPYNIERLKELVE GPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN
Sbjct: 361 TPYNIERLKELVEYGPHPPPGKTGAKYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLN 420
Query: 1558 DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET 1737
DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET
Sbjct: 421 DGDFVLFNRQPSLHKMSIMGHRIKIMPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFET 480
Query: 1738 RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFD 1917
RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRK+TKRDTFIEKDVFMNILMWWEDFD
Sbjct: 481 RAEVLELMMVPKCIVSPQANRPVMGIVQDTLLGCRKVTKRDTFIEKDVFMNILMWWEDFD 540
Query: 1918 GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHQENEKGFITPGDTQVRIEKGEL 2097
GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWH ++EKG+ITPGDTQVRIEKGEL
Sbjct: 541 GKVPAPAILKPRPLWTGKQVFNLIIPKQINLLRYSAWHNDSEKGYITPGDTQVRIEKGEL 600
Query: 2098 LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIAD 2277
LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQ AFSIGIGDTIAD
Sbjct: 601 LSGTLCKKTLGTSTGSLIHVIWEEVGPDAARKFLGHTQWLVNYWLLQQAFSIGIGDTIAD 660
Query: 2278 AATMEKINETISNAKNEVKELIRAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS 2457
AATMEKINETISNAK++VKELI+AAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS
Sbjct: 661 AATMEKINETISNAKSKVKELIKAAQEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSS 720
Query: 2458 AQKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDY 2637
A+KSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGF+DRTLPHFTKDDY
Sbjct: 721 AEKSLSESNNLKAMVTAGSKGSFINISQMTACVGQQNVEGKRIPFGFIDRTLPHFTKDDY 780
Query: 2638 GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY 2817
GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY
Sbjct: 781 GPESRGFVENSYLRGLTPQEFFFHAMGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKY 840
Query: 2818 DGTVRNSLGDVIQFLYGEDGMDSVWIESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYML 2997
DGTVRNSLGDVIQFLYGEDGMDSVWIE+Q L+SLK K++ F DMY YEID+PNWNP+YML
Sbjct: 841 DGTVRNSLGDVIQFLYGEDGMDSVWIETQKLDSLKAKKSTFEDMYAYEIDDPNWNPSYML 900
Query: 2998 PEAVEDLKTIREIRSVFDAEVQKLEADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTF 3177
EAVEDLK IREIRSVFDAEVQKLEADR QLGTEIA TGDNSWPLPVNI+RLVLNAQKTF
Sbjct: 901 LEAVEDLKGIREIRSVFDAEVQKLEADRHQLGTEIAVTGDNSWPLPVNIQRLVLNAQKTF 960
Query: 3178 KVDFRRPSDMHPMEIVEAVDKLQERLKVVVGDDYLSMEAQKNATLFFNILLRSALASKRV 3357
K+DFRRPSDMHPMEIVEAVDKLQERLKVV GDDYLSMEAQKNATLFFNILLRSALASKRV
Sbjct: 961 KIDFRRPSDMHPMEIVEAVDKLQERLKVVPGDDYLSMEAQKNATLFFNILLRSALASKRV 1020
Query: 3358 LKEYRLTREAFEWVIGEIESRFLQSLVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 3537
LKEYRL+REAFEWV+GEIESRFLQSLVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSA
Sbjct: 1021 LKEYRLSREAFEWVVGEIESRFLQSLVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSA 1080
Query: 3538 KNVTLGVPRLREIINVAKKIKTPSLSVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATE 3717
KNVTLGVPRLREIINVAKKIKTPSLSVYLKP+V KTKERAK VQCALEYTTLRSVTQATE
Sbjct: 1081 KNVTLGVPRLREIINVAKKIKTPSLSVYLKPEVGKTKERAKTVQCALEYTTLRSVTQATE 1140
Query: 3718 VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA 3897
VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA
Sbjct: 1141 VWYDPDPMSTLIEEDVEFVKSYYEMPDEEIDPDKISPWLLRIELNREMMVDKKLSMADIA 1200
Query: 3898 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTE 4077
EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL DESAEDDVFLKKIESNMLTE
Sbjct: 1201 EKINLEFDDDLTCIFNDDNAEKLILRIRIMNDEAPKGEL-DESAEDDVFLKKIESNMLTE 1259
Query: 4078 MALRGIPDINKVFIKNSKLNKFDENDGFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSN 4257
MALRGIPDINKVFIKNSK+ KFD+N+GFKAENEWMLDTEGVNLLAVM HEDVDA RTTSN
Sbjct: 1260 MALRGIPDINKVFIKNSKVQKFDDNEGFKAENEWMLDTEGVNLLAVMTHEDVDASRTTSN 1319
Query: 4258 HLIEVIEVLGIEAVRKALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN 4437
HLIEVIEVLGIEAVR+ALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN
Sbjct: 1320 HLIEVIEVLGIEAVRRALLDELRVVISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGIN 1379
Query: 4438 RNDTGPMMRCSFEETVDILLDAAVFAETDCLRGVTENIMLGQLAPIGTGDCALLLNEEML 4617
RNDTGPMMRCSFEETVDILLDAAVFAE+D L+GVTENIMLGQLAPIGTG CAL LNEEML
Sbjct: 1380 RNDTGPMMRCSFEETVDILLDAAVFAESDYLKGVTENIMLGQLAPIGTGGCALYLNEEML 1439
Query: 4618 KQAIEIPLPSYMEGGLDFGMTPARSPLTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPY 4797
KQAIEIPLPSYMEGGL+FGMTP RSP++GTPYHDGMMSPNYLLSPN+R+SP+TDAQFSPY
Sbjct: 1440 KQAIEIPLPSYMEGGLEFGMTPGRSPISGTPYHDGMMSPNYLLSPNMRMSPMTDAQFSPY 1499
Query: 4798 VGGMAF 4815
VGGMAF
Sbjct: 1500 VGGMAF 1505
>ref|XP_010266907.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Nelumbo
nucifera]
Length = 1848
Score = 2850 bits (7389), Expect = 0.0
Identities = 1405/1536 (91%), Positives = 1482/1536 (96%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MD RFP+SPAEV+KVR VQFGILSPD IRQMSVV IEHSETTE+GKPK GGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVSKVRRVQFGILSPDVIRQMSVVQIEHSETTEKGKPKPGGLSDTRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 747
FKQA RIRNPKNRL+K+LDACKNK+KCEGGDEI+VQGQD+ EP+KK RGGCGAQQPK++I
Sbjct: 121 FKQAQRIRNPKNRLKKVLDACKNKTKCEGGDEIEVQGQDTGEPIKKRRGGCGAQQPKLTI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
+GMKM+AEYK Q+KKNDD EQ+PEPVERKQ LSAE+VLS+LKRI+DEDC LLGLNP+YAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLSAERVLSVLKRISDEDCILLGLNPEYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
+DGQRLDLRYLKKSSD HLELGYKVERHL DGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLQDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
L+R SAWH E+E GFITPGDTQVRIE+GELL+GTLCKKTLGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSESETGFITPGDTQVRIERGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAAQE+QL
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+Q
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK+++++F+ +++YEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMRKSEFDKVFRYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRYQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIATTGDN+WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEIATTGDNNWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDD+LSMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDFLSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEE+
Sbjct: 1141 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDE++GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR+ALLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETDC
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDC 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTGDCAL LN++ML+QAIE+ LPSYME GLDFGMTP+RSP+ GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRSPIMGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PY++GMMSP+YLLSPN RLSP+TDAQFSPYVGGMAF
Sbjct: 1500 PYNEGMMSPSYLLSPNARLSPITDAQFSPYVGGMAF 1535
>gb|OVA15969.1| RNA polymerase II [Macleaya cordata]
Length = 1853
Score = 2848 bits (7383), Expect = 0.0
Identities = 1406/1541 (91%), Positives = 1479/1541 (95%), Gaps = 6/1541 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MD+RFP+SPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQD-SEPLKKSRGGCGAQQPKISI 747
FKQ+ RI+NPK+RL+K+LDACKNK+KCEGGDEIDVQGQD EP+KKSRGGCGAQQPK++I
Sbjct: 121 FKQSQRIKNPKHRLKKVLDACKNKNKCEGGDEIDVQGQDLEEPVKKSRGGCGAQQPKLTI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
+GMKM+AEYK Q+KKNDD EQ+PEPVERKQ L+AE+VLS+LKRI+DEDC LLGLNP +AR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQQLTAERVLSVLKRISDEDCMLLGLNPMFAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSE-----DDLTHQLAMIIRHNENLKRQERNGAP 1092
PDWMILQVL SVMMDTSARSE DDLTHQLAMIIRHNENL+RQERNGAP
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEASFFYDDLTHQLAMIIRHNENLRRQERNGAP 300
Query: 1093 AHIISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRV 1272
AHIISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRV
Sbjct: 301 AHIISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRV 360
Query: 1273 DFSARTVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGA 1452
DFSARTVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGA
Sbjct: 361 DFSARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGA 420
Query: 1453 KYIIRDDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKI 1632
KYIIR+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKI
Sbjct: 421 KYIIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKI 480
Query: 1633 MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMG 1812
MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMG
Sbjct: 481 MPYSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMG 540
Query: 1813 IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLII 1992
IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAPAILKPRPLWTGKQVFNLII
Sbjct: 541 IVQDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLII 600
Query: 1993 PKQINLLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEV 2172
PKQINL+R SAWH E+E GFITPGDTQVRIE+GELL+GTLCKK LGTSTGSLIHVIWEEV
Sbjct: 601 PKQINLMRVSAWHSESETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEV 660
Query: 2173 GPDAARKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAA 2352
GPDAARKFLGHTQWLVNYWLLQN FSIGIGDTIADAATMEKINETIS AKNEVKELIRAA
Sbjct: 661 GPDAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAA 720
Query: 2353 QEKQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFIN 2532
QEKQLE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFIN
Sbjct: 721 QEKQLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFIN 780
Query: 2533 ISQMTACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHA 2712
ISQMTACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHA
Sbjct: 781 ISQMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHA 840
Query: 2713 MGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVW 2892
MGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VW
Sbjct: 841 MGGREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVW 900
Query: 2893 IESQPLESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLE 3072
IESQ L+SLK+K+++F+ +++YEIDN NWNP+YMLPE VEDLKTIRE R+VFDAEV+KLE
Sbjct: 901 IESQKLDSLKMKKSEFDKVFRYEIDNENWNPSYMLPEHVEDLKTIREFRNVFDAEVKKLE 960
Query: 3073 ADRFQLGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQER 3252
DRFQLGTEI TTGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQER
Sbjct: 961 GDRFQLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQER 1020
Query: 3253 LKVVVGDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQS 3432
LKVV GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAFEWVIGEIESRFLQS
Sbjct: 1021 LKVVPGDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQS 1080
Query: 3433 LVAAGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSL 3612
LVA GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSL
Sbjct: 1081 LVAPGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSL 1140
Query: 3613 SVYLKPDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEM 3792
SVYLKP+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEM
Sbjct: 1141 SVYLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEM 1200
Query: 3793 PDEEIDPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLIL 3972
PDEE+ P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLIL
Sbjct: 1201 PDEEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLIL 1260
Query: 3973 RIRIMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDEN 4152
RIRIMNDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDEN
Sbjct: 1261 RIRIMNDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDEN 1320
Query: 4153 DGFKAENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVV 4332
DGFK ENEWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVR++LLDELRVV
Sbjct: 1321 DGFKPENEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVV 1380
Query: 4333 ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVF 4512
ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+
Sbjct: 1381 ISFDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVY 1440
Query: 4513 AETDCLRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARS 4692
AETD LRGVTENIMLGQLAPIGTG CAL LN++ML+QAIE+ LPSYME GLDFGMTP+RS
Sbjct: 1441 AETDYLRGVTENIMLGQLAPIGTGGCALYLNDQMLQQAIELQLPSYME-GLDFGMTPSRS 1499
Query: 4693 PLTGTPYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
P+TGTPYH+GMMSP+YLLSPN+R SP++DAQFSPYVGGMAF
Sbjct: 1500 PITGTPYHEGMMSPSYLLSPNVRSSPISDAQFSPYVGGMAF 1540
>ref|XP_017252141.1| PREDICTED: DNA-directed RNA polymerase II subunit 1 [Daucus carota
subsp. sativus]
Length = 1843
Score = 2840 bits (7363), Expect = 0.0
Identities = 1397/1536 (90%), Positives = 1475/1536 (96%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVVHIEH ETTERGKPK GLSDPRLGTI
Sbjct: 1 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVHIEHGETTERGKPKPSGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRKMKCETCMANMAECPGHFGHLELAKPMFHIGF+KTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDYK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 747
FKQA +IRNPKNRL+KILD+CK+K+KCEGGDEI+ Q QD+ EPLKKSRGGCGAQQPKI+I
Sbjct: 121 FKQAQKIRNPKNRLKKILDSCKSKTKCEGGDEIESQSQDTDEPLKKSRGGCGAQQPKITI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
+GMKM+AEYK+QKKKNDDPEQ+PEPVERKQ LSAE+VL++LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQKKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCMLLGLNPKYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
L+R SAWH + E G ITPGDTQVRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LMRQSAWHADGETGHITPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQ FSIGIGDTIADAATMEKINETIS AKN VKELIR+AQ+K L
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISTAKNAVKELIRSAQDKDL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
E EPGRTMMESFEN+VNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK+K+ +F+ +++YEID+ NWNP+YMLP+ VEDLKTIRE R+VFDAEVQKLEADRFQ
Sbjct: 901 LDSLKMKKNEFDKVFRYEIDDGNWNPSYMLPDHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEI TTGDN+WP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERLKVV
Sbjct: 961 LGTEITTTGDNTWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDD +SMEAQKNATLFFNILLRS ASKRVLKEYRLTREAF+WVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLMSMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+VS +KE+AKNVQCALEYTTLRSVTQATEVWYDPDPMST+I+EDV+FVKSYYEMPDEEI
Sbjct: 1141 PNVSSSKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIDEDVDFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLR++LNREMM+DKKLSMADIAEKINLEFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 DPDKISPWLLRVQLNREMMIDKKLSMADIAEKINLEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K N+FDEN+GF
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQQKTNRFDENNGFVT 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAV+CHE+VDARRTTSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EPEWMLDTEGVNLLAVICHEEVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTGDC+L LNE+MLKQAI+I LPSYM+ GLDFGMTPARSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCSLYLNEKMLKQAIDIQLPSYMD-GLDFGMTPARSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSPNY+LSPNLRLSP+TDAQFSPYVGGM F
Sbjct: 1500 PYHDGMMSPNYMLSPNLRLSPITDAQFSPYVGGMGF 1535
>ref|XP_022034547.1| DNA-directed RNA polymerase II subunit 1 [Helianthus annuus]
gb|OTG28102.1| putative RNA polymerase II large subunit [Helianthus annuus]
Length = 1824
Score = 2838 bits (7357), Expect = 0.0
Identities = 1408/1537 (91%), Positives = 1468/1537 (95%), Gaps = 2/1537 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MD+RFP+SPAEVAKVRVVQFGILSPDEIRQMSVVHIEH ETTERGKPK+ GLSDPRLGTI
Sbjct: 1 MDIRFPYSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEED K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDS-EPLKKSRGGCGAQQPKISI 747
FKQA +IRNPKNRL+KILDACK+K+KC+GGDEID Q QD EP+KKSRGGCGAQQPKI+I
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKSKTKCDGGDEIDSQNQDGDEPVKKSRGGCGAQQPKITI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
+GMKMVAEYKLQKKKNDD EQ+PEP ERKQ LSAE+VLS+LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMVAEYKLQKKKNDDTEQLPEPAERKQQLSAERVLSVLKRISDEDCMLLGLNPKYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENL+RQERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
+DGQRLDLRYLKKSSD HLE GYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLEFGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVP P ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPTPTILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
L+R SAWH E E G +TPGDTQVRIEKGE+++GTLCKKTLG STGSLIHVIWEEVGPDAA
Sbjct: 601 LIRTSAWHSETETGHLTPGDTQVRIEKGEVITGTLCKKTLGASTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TME INETIS AKNEVKELIRAAQ+KQL
Sbjct: 661 RKFLGHTQWLVNYWLLQQGFSIGIGDTIADASTMETINETISKAKNEVKELIRAAQDKQL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK+K+ +F+ +YKYEID+ NWNP+YMLPE VEDLKTIRE R+VFDAEVQKLEADR Q
Sbjct: 901 LDSLKIKKKEFDRLYKYEIDDQNWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRVQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIATTGDNSWP+PVN+KRL+ NAQKTFKVD RRPSDMHPMEIVEAVDKLQERL+VV
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLRVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
GDD LS+EAQKNATLFFNILLRS ASKRVL EYRLTREAFEWVIGEIESRFLQSLVA G
Sbjct: 1021 GDDLLSIEAQKNATLFFNILLRSTFASKRVLSEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
PDVSKTK+RAKNVQCALEYTTLRSVTQATEVWYDPDPMST+IEEDV+FVKSYYEMPDEEI
Sbjct: 1141 PDVSKTKDRAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
NDEAPKGEL DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ K+NKFDEN+GFK
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDENEGFKP 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVMCHEDVDA R+TSNHLIEVIEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDALRSTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAV+AETD
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVYAETDY 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTGDCALLLNE+ML+QAI++ LPSYM+ GLD GMTP RSP+ T
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALLLNEQMLQQAIDVQLPSYMD-GLDIGMTPGRSPI--T 1497
Query: 4708 PYHDGMMSP-NYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYHDGMMSP NYLLSPNLRLSP DAQFSPYVGGM F
Sbjct: 1498 PYHDGMMSPTNYLLSPNLRLSPFNDAQFSPYVGGMGF 1534
>gb|PKI74424.1| hypothetical protein CRG98_005188 [Punica granatum]
Length = 1853
Score = 2833 bits (7344), Expect = 0.0
Identities = 1394/1536 (90%), Positives = 1475/1536 (96%), Gaps = 1/1536 (0%)
Frame = +1
Query: 211 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 390
MDLRFPFSPAEVAKVR+VQFGILSPDEIRQMSV+ IEHSETTERGKPK GGLSDPRLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 391 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKTVLSILRSVCFNCSKILADEEDPK 570
DRK+KCETC ANMAECPGHFGHLELAKPMFHIGFMKTVLSI+R VCFNCSKILADEE+ K
Sbjct: 61 DRKLKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120
Query: 571 FKQAMRIRNPKNRLRKILDACKNKSKCEGGDEIDVQGQDSE-PLKKSRGGCGAQQPKISI 747
FKQAMRIRNPKNRL+KILDACKNK+KCEGGDEIDVQGQDSE P+KKSRGGCGAQQPK++I
Sbjct: 121 FKQAMRIRNPKNRLKKILDACKNKTKCEGGDEIDVQGQDSEEPVKKSRGGCGAQQPKLTI 180
Query: 748 DGMKMVAEYKLQKKKNDDPEQMPEPVERKQLLSAEKVLSILKRITDEDCQLLGLNPKYAR 927
+GMKM+AEYK +KK+DDP+Q+PEPVERKQ LSAE+VLS+LKRI+DEDCQLLGLNPKYAR
Sbjct: 181 EGMKMIAEYKSPRKKSDDPDQLPEPVERKQTLSAERVLSVLKRISDEDCQLLGLNPKYAR 240
Query: 928 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 1107
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRQQERNGAPAHIIS 300
Query: 1108 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1287
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1288 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 1467
TVITPDP INID+LGVPWSIALNLTYPE VTPYNIERLKELVE GPHPPPGKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPEAVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1468 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1647
DDGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1648 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 1827
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1828 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 2007
LLGCRKITKRDTFIEKDVFMN LMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNTLMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 2008 LLRYSAWHQENEKGFITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 2187
L+R SAWH E E GFITPGDTQVRIEKGELLSGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LMRTSAWHSELETGFITPGDTQVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2188 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 2367
RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATME+INETIS AK+EVK LI+ AQEK+L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMERINETISKAKDEVKRLIKEAQEKKL 720
Query: 2368 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2547
E EPGRTMMESFEN+VNQVLNKARDDAGSSAQ+SLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGSSAQRSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2548 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2727
ACVGQQNVEGKRIPFGF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2728 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQP 2907
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2908 LESLKLKRTDFNDMYKYEIDNPNWNPNYMLPEAVEDLKTIREIRSVFDAEVQKLEADRFQ 3087
L+SLK+KR++F+ +++YE+D+ NWNP+YMLPE +EDL+TIREIR+VFDAEVQKLEADR+Q
Sbjct: 901 LDSLKMKRSEFDRVFRYELDDDNWNPDYMLPEHIEDLRTIREIRNVFDAEVQKLEADRYQ 960
Query: 3088 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 3267
LGTEIATTGDNSWPLPVN+KRL+ NAQKTFK+D RR SDMHPMEIVE VDKLQE+L VV
Sbjct: 961 LGTEIATTGDNSWPLPVNLKRLIWNAQKTFKIDMRRTSDMHPMEIVEYVDKLQEKLLVVP 1020
Query: 3268 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 3447
G D LS+EAQKNATLFFNILLRS ASKRVLKEYRLTREAFEW++GEIESRFL SLVA G
Sbjct: 1021 GKDLLSVEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWILGEIESRFLLSLVAPG 1080
Query: 3448 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3627
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3628 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 3807
P+V+KTKE AKN+QCALEYTTLRSVTQATEVWYDPDPM T+IEED++FVKSYYEMPDEEI
Sbjct: 1141 PEVNKTKESAKNIQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEI 1200
Query: 3808 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3987
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDL CIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLNCIFNDDNADKLILRIRIM 1260
Query: 3988 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 4167
ND+APKGE+NDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKN K+NKF+E+DGFK
Sbjct: 1261 NDDAPKGEMNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNGKVNKFEESDGFKP 1320
Query: 4168 ENEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRKALLDELRVVISFDG 4347
E EWMLDTEGVNLLAVMCHE VDARRTTSNHLIE+IEVLGIEAVR++LLDELRVVISFDG
Sbjct: 1321 ETEWMLDTEGVNLLAVMCHEGVDARRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4348 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPMMRCSFEETVDILLDAAVFAETDC 4527
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGP+MRCSFEETVDILLDAAV+AE+D
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDTGPLMRCSFEETVDILLDAAVYAESDY 1440
Query: 4528 LRGVTENIMLGQLAPIGTGDCALLLNEEMLKQAIEIPLPSYMEGGLDFGMTPARSPLTGT 4707
LRGVTENIMLGQLAPIGTGDCAL LN+EMLK AIE+ LPSYME GLDFGMTPARSP++GT
Sbjct: 1441 LRGVTENIMLGQLAPIGTGDCALYLNDEMLKHAIELQLPSYME-GLDFGMTPARSPISGT 1499
Query: 4708 PYHDGMMSPNYLLSPNLRLSPVTDAQFSPYVGGMAF 4815
PYH+GMMSP+YLLSPNLRLSP+TDAQFSPYVGGMAF
Sbjct: 1500 PYHEGMMSPSYLLSPNLRLSPITDAQFSPYVGGMAF 1535