BLASTX nr result

ID: Rehmannia32_contig00004590 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00004590
         (481 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_011098243.1| multiple organellar RNA editing factor 8, ch...    62   3e-08
ref|XP_021288480.1| multiple organellar RNA editing factor 8, ch...    53   8e-06

>ref|XP_011098243.1| multiple organellar RNA editing factor 8,
           chloroplastic/mitochondrial [Sesamum indicum]
          Length = 440

 Score = 62.4 bits (150), Expect = 3e-08
 Identities = 34/62 (54%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
 Frame = -1

Query: 187 NNMRAPPGNNAPNHQYGPGPNNG---YQSXXXXXXXXXXXXXXPSQGQNQNAYAPNMGGG 17
           NNMR PP NNAPN+QYG G N+G   YQS              P QGQNQ+ Y PNMGGG
Sbjct: 298 NNMRGPP-NNAPNYQYGHGNNSGGAPYQSGPGPNQNGFAPSMVPGQGQNQSGYGPNMGGG 356

Query: 16  NP 11
            P
Sbjct: 357 FP 358


>ref|XP_021288480.1| multiple organellar RNA editing factor 8,
           chloroplastic/mitochondrial-like, partial [Herrania
           umbratica]
          Length = 127

 Score = 52.8 bits (125), Expect = 8e-06
 Identities = 21/21 (100%), Positives = 21/21 (100%)
 Frame = -1

Query: 481 GEPFINGQAVPYDPKYHEEWV 419
           GEPFINGQAVPYDPKYHEEWV
Sbjct: 50  GEPFINGQAVPYDPKYHEEWV 70


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