BLASTX nr result
ID: Rehmannia32_contig00002855
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00002855
(410 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_020554269.1| peptide deformylase 1B, chloroplastic [Sesam... 138 9e-38
ref|XP_012840677.1| PREDICTED: peptide deformylase 1B, chloropla... 118 6e-30
ref|XP_023728714.1| peptide deformylase 1B, chloroplastic isofor... 107 3e-26
ref|XP_023728713.1| peptide deformylase 1B, chloroplastic isofor... 107 7e-26
ref|XP_019228581.1| PREDICTED: peptide deformylase 1B, chloropla... 104 1e-24
ref|XP_019161788.1| PREDICTED: peptide deformylase 1B, chloropla... 104 2e-24
emb|CDP18330.1| unnamed protein product [Coffea canephora] 104 2e-24
gb|PPS17982.1| hypothetical protein GOBAR_AA02611 [Gossypium bar... 103 2e-24
ref|XP_009779381.1| PREDICTED: peptide deformylase 1B, chloropla... 103 2e-24
gb|KZV23920.1| peptide deformylase 1B, chloroplastic [Dorcoceras... 103 2e-24
gb|POE96143.1| peptide deformylase 1b, chloroplastic [Quercus su... 100 3e-24
ref|XP_016440535.1| PREDICTED: peptide deformylase 1B, chloropla... 103 3e-24
ref|XP_016678555.1| PREDICTED: peptide deformylase 1B, chloropla... 102 5e-24
ref|XP_012454557.1| PREDICTED: peptide deformylase 1B, chloropla... 102 5e-24
ref|XP_010248488.1| PREDICTED: peptide deformylase 1B, chloropla... 102 8e-24
ref|XP_017647194.1| PREDICTED: peptide deformylase 1B, chloropla... 102 8e-24
ref|XP_016678553.1| PREDICTED: peptide deformylase 1B, chloropla... 102 8e-24
ref|XP_016698573.1| PREDICTED: peptide deformylase 1B, chloropla... 102 8e-24
ref|XP_012454553.1| PREDICTED: peptide deformylase 1B, chloropla... 102 8e-24
ref|XP_009618059.1| PREDICTED: peptide deformylase 1B, chloropla... 102 8e-24
>ref|XP_020554269.1| peptide deformylase 1B, chloroplastic [Sesamum indicum]
Length = 278
Score = 138 bits (348), Expect = 9e-38
Identities = 76/122 (62%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Frame = +1
Query: 49 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVRRLLA--GAGFHTLSSNLYKPLVRPVIAQ 222
MA ATC+HS H HS RL GF TLSSN +K LV PV AQ
Sbjct: 1 MAFATCVHSTALTHTLVPFLHRGPPLGHSTFCRLYRFNSPGFFTLSSNSFKHLVPPVFAQ 60
Query: 223 ARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDV 402
ARRSFS MAKE AVAS A+L FEG L+IV+YPDP+LRAKNKR+ TFDESLKKLVD MFDV
Sbjct: 61 ARRSFSSMAKEEAVASPAELQFEGRLEIVQYPDPVLRAKNKRINTFDESLKKLVDVMFDV 120
Query: 403 MY 408
MY
Sbjct: 121 MY 122
>ref|XP_012840677.1| PREDICTED: peptide deformylase 1B, chloroplastic [Erythranthe
guttata]
gb|EYU34724.1| hypothetical protein MIMGU_mgv1a011756mg [Erythranthe guttata]
Length = 271
Score = 118 bits (295), Expect = 6e-30
Identities = 68/120 (56%), Positives = 77/120 (64%)
Frame = +1
Query: 49 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQAR 228
MA AT +HS +H ++ RRL AG SS K +PV AQAR
Sbjct: 1 MAFATGLHSTALSHTILPLLHHRGTLLYAHFRRLSNSAGLFASSSRRCKREFQPVFAQAR 60
Query: 229 RSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDVMY 408
RSFS +AVAS +DL FEGPLKI+EYPDP LRAKNKRV TFDE+LKKLVDEMFDVMY
Sbjct: 61 RSFS-----SAVASPSDLQFEGPLKIIEYPDPKLRAKNKRVDTFDETLKKLVDEMFDVMY 115
>ref|XP_023728714.1| peptide deformylase 1B, chloroplastic isoform X2 [Lactuca sativa]
Length = 228
Score = 107 bits (268), Expect = 3e-26
Identities = 64/121 (52%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +1
Query: 49 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVRRLLAGAGFHTLSSNL-YKPLVRPVIAQA 225
MACA IHS+ H S AG SSN Y+P V AQA
Sbjct: 1 MACANWIHSSALFHATFPTTSHRRDTPSSSFSLATXSAGKPIFSSNYQYRPPAVAVQAQA 60
Query: 226 RRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDVM 405
+R FS + KE ASAAD+ FE PLK+V YPDPILRAKNK + TFDE+LKKLVDEMFDVM
Sbjct: 61 KRGFS-LKKEEETASAADMQFEAPLKVVLYPDPILRAKNKLIATFDENLKKLVDEMFDVM 119
Query: 406 Y 408
Y
Sbjct: 120 Y 120
>ref|XP_023728713.1| peptide deformylase 1B, chloroplastic isoform X1 [Lactuca sativa]
Length = 276
Score = 107 bits (268), Expect = 7e-26
Identities = 64/121 (52%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Frame = +1
Query: 49 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVRRLLAGAGFHTLSSNL-YKPLVRPVIAQA 225
MACA IHS+ H S AG SSN Y+P V AQA
Sbjct: 1 MACANWIHSSALFHATFPTTSHRRDTPSSSFSLATXSAGKPIFSSNYQYRPPAVAVQAQA 60
Query: 226 RRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDVM 405
+R FS + KE ASAAD+ FE PLK+V YPDPILRAKNK + TFDE+LKKLVDEMFDVM
Sbjct: 61 KRGFS-LKKEEETASAADMQFEAPLKVVLYPDPILRAKNKLIATFDENLKKLVDEMFDVM 119
Query: 406 Y 408
Y
Sbjct: 120 Y 120
>ref|XP_019228581.1| PREDICTED: peptide deformylase 1B, chloroplastic [Nicotiana
attenuata]
gb|OIT30630.1| peptide deformylase 1b, chloroplastic [Nicotiana attenuata]
Length = 277
Score = 104 bits (260), Expect = 1e-24
Identities = 55/81 (67%), Positives = 63/81 (77%)
Frame = +1
Query: 166 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 345
F + SSN KP V AQARR+ SP K VAS ADL FEGPLKI+EYPDPILRAKNK
Sbjct: 43 FFSTSSN--KPPKLAVYAQARRALSPKIKGDEVASPADLSFEGPLKIIEYPDPILRAKNK 100
Query: 346 RVKTFDESLKKLVDEMFDVMY 408
R+ TFD++LKKLV+EMFD+MY
Sbjct: 101 RIGTFDDNLKKLVNEMFDIMY 121
>ref|XP_019161788.1| PREDICTED: peptide deformylase 1B, chloroplastic [Ipomoea nil]
Length = 281
Score = 104 bits (259), Expect = 2e-24
Identities = 60/91 (65%), Positives = 69/91 (75%), Gaps = 2/91 (2%)
Frame = +1
Query: 142 RRLLA-GAGFHTLSSNLYKPLVRPVIAQARRSFSP-MAKEAAVASAADLLFEGPLKIVEY 315
RRL++ G FH++S N PL V AQARRS S + +AS ADL FEGPLKIVEY
Sbjct: 33 RRLMSTGRPFHSISRNKPSPLA--VRAQARRSLSSNKVIKDELASLADLCFEGPLKIVEY 90
Query: 316 PDPILRAKNKRVKTFDESLKKLVDEMFDVMY 408
PDPILRAKNKR+ TFD++LKKLVDEMFDVMY
Sbjct: 91 PDPILRAKNKRIGTFDDNLKKLVDEMFDVMY 121
>emb|CDP18330.1| unnamed protein product [Coffea canephora]
Length = 284
Score = 104 bits (259), Expect = 2e-24
Identities = 66/127 (51%), Positives = 79/127 (62%), Gaps = 7/127 (5%)
Frame = +1
Query: 49 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVRRL---LAGAGFHTLSSNLYKP--LVRPV 213
MA AT ++S+PF+ S RRL F+ S++ +KP + V
Sbjct: 1 MAGATWLYSSPFSKALLSKLPGTATIAPSIFRRLHRFTPTNPFNYSSTSPHKPPGMAAGV 60
Query: 214 IAQARRSFSPMAK--EAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVD 387
AQARRSFS +K E AS ADL FE PLKIVEYPDPILRAKNKR+ TFD +LKKLVD
Sbjct: 61 RAQARRSFSSSSKVKEDEFASVADLQFEAPLKIVEYPDPILRAKNKRISTFDHNLKKLVD 120
Query: 388 EMFDVMY 408
EMFD+MY
Sbjct: 121 EMFDIMY 127
>gb|PPS17982.1| hypothetical protein GOBAR_AA02611 [Gossypium barbadense]
Length = 251
Score = 103 bits (257), Expect = 2e-24
Identities = 56/83 (67%), Positives = 65/83 (78%)
Frame = +1
Query: 160 AGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAK 339
AGF T S N PL+ PV AQA+R FS +K+ ++SA DL FE PLKIVEYPDPILR +
Sbjct: 39 AGF-TSSVNQTNPLLTPVHAQAKRGFS--SKDHKISSAEDLQFEPPLKIVEYPDPILRKR 95
Query: 340 NKRVKTFDESLKKLVDEMFDVMY 408
NKR+ TFDE+LKKLVDEMFDVMY
Sbjct: 96 NKRIDTFDENLKKLVDEMFDVMY 118
>ref|XP_009779381.1| PREDICTED: peptide deformylase 1B, chloroplastic, partial
[Nicotiana sylvestris]
Length = 252
Score = 103 bits (257), Expect = 2e-24
Identities = 55/81 (67%), Positives = 63/81 (77%)
Frame = +1
Query: 166 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 345
F + SSN KP V AQARR+ SP K +AS ADL FEGPLKIVEYPDPILRAKNK
Sbjct: 43 FFSTSSN--KPPKFAVYAQARRALSPKIKGDEMASPADLSFEGPLKIVEYPDPILRAKNK 100
Query: 346 RVKTFDESLKKLVDEMFDVMY 408
R+ TFD++LKKLV+EMFD+MY
Sbjct: 101 RIGTFDDNLKKLVNEMFDIMY 121
>gb|KZV23920.1| peptide deformylase 1B, chloroplastic [Dorcoceras hygrometricum]
Length = 240
Score = 103 bits (256), Expect = 2e-24
Identities = 52/75 (69%), Positives = 61/75 (81%)
Frame = +1
Query: 184 NLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFD 363
N YK ++ A ARRSFS +EA ASA DL +EGPLKIV+YPDP+LRAKNKRVKTFD
Sbjct: 50 NQYKTPLKQTTALARRSFSSSTEEA-FASAVDLQYEGPLKIVKYPDPVLRAKNKRVKTFD 108
Query: 364 ESLKKLVDEMFDVMY 408
E+LKK+VDEMFD+MY
Sbjct: 109 ENLKKIVDEMFDIMY 123
>gb|POE96143.1| peptide deformylase 1b, chloroplastic [Quercus suber]
Length = 131
Score = 99.8 bits (247), Expect = 3e-24
Identities = 58/120 (48%), Positives = 70/120 (58%)
Frame = +1
Query: 49 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVRRLLAGAGFHTLSSNLYKPLVRPVIAQAR 228
MAC T +HS H R +G F SS+ +P PV QA+
Sbjct: 1 MACKTWLHSFSLVPILHRRSSTLPAMSHLLNRSSQSGRLF---SSSANRPSPTPVHTQAK 57
Query: 229 RSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDVMY 408
R FS + AVAS D+ FE PLKIVEYPDPILRAKNKR+ +FD++L+KLV EMFDVMY
Sbjct: 58 RGFSSKNDDVAVASPEDVRFEAPLKIVEYPDPILRAKNKRIDSFDDNLQKLVHEMFDVMY 117
>ref|XP_016440535.1| PREDICTED: peptide deformylase 1B, chloroplastic [Nicotiana
tabacum]
Length = 277
Score = 103 bits (257), Expect = 3e-24
Identities = 55/81 (67%), Positives = 63/81 (77%)
Frame = +1
Query: 166 FHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNK 345
F + SSN KP V AQARR+ SP K +AS ADL FEGPLKIVEYPDPILRAKNK
Sbjct: 43 FFSTSSN--KPPKFAVYAQARRALSPKIKGDEMASPADLSFEGPLKIVEYPDPILRAKNK 100
Query: 346 RVKTFDESLKKLVDEMFDVMY 408
R+ TFD++LKKLV+EMFD+MY
Sbjct: 101 RIGTFDDNLKKLVNEMFDIMY 121
>ref|XP_016678555.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial-like
isoform X2 [Gossypium hirsutum]
Length = 255
Score = 102 bits (254), Expect = 5e-24
Identities = 56/83 (67%), Positives = 64/83 (77%)
Frame = +1
Query: 160 AGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAK 339
AGF T S N PL+ PV AQA+R FS +K+ + SA DL FE PLKIVEYPDPILR +
Sbjct: 39 AGF-TSSVNQTNPLLTPVHAQAKRGFS--SKDHKIYSAEDLQFEPPLKIVEYPDPILRKR 95
Query: 340 NKRVKTFDESLKKLVDEMFDVMY 408
NKR+ TFDE+LKKLVDEMFDVMY
Sbjct: 96 NKRIDTFDENLKKLVDEMFDVMY 118
>ref|XP_012454557.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial
isoform X2 [Gossypium raimondii]
Length = 255
Score = 102 bits (254), Expect = 5e-24
Identities = 54/79 (68%), Positives = 62/79 (78%)
Frame = +1
Query: 172 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 351
T S N PL+ PV AQA+R FS +K+ +ASA DL FE PLKIVEYPDPILR +NKR+
Sbjct: 42 TSSVNQTNPLLTPVRAQAKRGFS--SKDHKMASAEDLQFEPPLKIVEYPDPILRKRNKRI 99
Query: 352 KTFDESLKKLVDEMFDVMY 408
TFDE+LKKLVDEMFDVMY
Sbjct: 100 DTFDENLKKLVDEMFDVMY 118
>ref|XP_010248488.1| PREDICTED: peptide deformylase 1B, chloroplastic isoform X2
[Nelumbo nucifera]
Length = 254
Score = 102 bits (253), Expect = 8e-24
Identities = 63/122 (51%), Positives = 77/122 (63%), Gaps = 2/122 (1%)
Frame = +1
Query: 49 MACATCIHSNPFAHXXXXXXXXXXXXXHSPVRRL--LAGAGFHTLSSNLYKPLVRPVIAQ 222
MACAT + S+ ++ S +R L+ G S+ L++P + V Q
Sbjct: 1 MACATWLQSSSLSYALAPVLCRHARLSAS-LRCFYHLSSTGRLGYSNVLHRPPLMDVSVQ 59
Query: 223 ARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRVKTFDESLKKLVDEMFDV 402
ARR FS +E VAS ADL FE PLKIVEYPDPILRA+NKR+ TFDE+LKKLVDEMFDV
Sbjct: 60 ARRGFS--VREDEVASPADLSFEPPLKIVEYPDPILRARNKRINTFDENLKKLVDEMFDV 117
Query: 403 MY 408
MY
Sbjct: 118 MY 119
>ref|XP_017647194.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial
isoform X2 [Gossypium arboreum]
Length = 255
Score = 102 bits (253), Expect = 8e-24
Identities = 53/79 (67%), Positives = 62/79 (78%)
Frame = +1
Query: 172 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 351
T S N PL+ PV AQA+R FS +K+ ++SA DL FE PLKIVEYPDPILR +NKR+
Sbjct: 42 TSSVNQTNPLLTPVHAQAKRGFS--SKDHKISSAEDLQFEPPLKIVEYPDPILRKRNKRI 99
Query: 352 KTFDESLKKLVDEMFDVMY 408
TFDE+LKKLVDEMFDVMY
Sbjct: 100 DTFDENLKKLVDEMFDVMY 118
>ref|XP_016678553.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial-like
isoform X1 [Gossypium hirsutum]
ref|XP_016678554.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial-like
isoform X1 [Gossypium hirsutum]
Length = 273
Score = 102 bits (254), Expect = 8e-24
Identities = 56/83 (67%), Positives = 64/83 (77%)
Frame = +1
Query: 160 AGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAK 339
AGF T S N PL+ PV AQA+R FS +K+ + SA DL FE PLKIVEYPDPILR +
Sbjct: 39 AGF-TSSVNQTNPLLTPVHAQAKRGFS--SKDHKIYSAEDLQFEPPLKIVEYPDPILRKR 95
Query: 340 NKRVKTFDESLKKLVDEMFDVMY 408
NKR+ TFDE+LKKLVDEMFDVMY
Sbjct: 96 NKRIDTFDENLKKLVDEMFDVMY 118
>ref|XP_016698573.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial-like
[Gossypium hirsutum]
ref|XP_016698574.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial-like
[Gossypium hirsutum]
ref|XP_016698575.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial-like
[Gossypium hirsutum]
ref|XP_016698576.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial-like
[Gossypium hirsutum]
gb|PPD74242.1| hypothetical protein GOBAR_DD28827 [Gossypium barbadense]
Length = 274
Score = 102 bits (254), Expect = 8e-24
Identities = 54/79 (68%), Positives = 62/79 (78%)
Frame = +1
Query: 172 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 351
T S N PL+ PV AQA+R FS +K+ +ASA DL FE PLKIVEYPDPILR +NKR+
Sbjct: 42 TSSVNQTNPLLTPVHAQAKRGFS--SKDHKMASAEDLQFEPPLKIVEYPDPILRKRNKRI 99
Query: 352 KTFDESLKKLVDEMFDVMY 408
TFDE+LKKLVDEMFDVMY
Sbjct: 100 DTFDENLKKLVDEMFDVMY 118
>ref|XP_012454553.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial
isoform X1 [Gossypium raimondii]
ref|XP_012454554.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial
isoform X1 [Gossypium raimondii]
ref|XP_012454555.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial
isoform X1 [Gossypium raimondii]
ref|XP_012454556.1| PREDICTED: peptide deformylase 1B, chloroplastic/mitochondrial
isoform X1 [Gossypium raimondii]
gb|KJB70911.1| hypothetical protein B456_011G095500 [Gossypium raimondii]
gb|KJB70912.1| hypothetical protein B456_011G095500 [Gossypium raimondii]
gb|KJB70913.1| hypothetical protein B456_011G095500 [Gossypium raimondii]
Length = 274
Score = 102 bits (254), Expect = 8e-24
Identities = 54/79 (68%), Positives = 62/79 (78%)
Frame = +1
Query: 172 TLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILRAKNKRV 351
T S N PL+ PV AQA+R FS +K+ +ASA DL FE PLKIVEYPDPILR +NKR+
Sbjct: 42 TSSVNQTNPLLTPVRAQAKRGFS--SKDHKMASAEDLQFEPPLKIVEYPDPILRKRNKRI 99
Query: 352 KTFDESLKKLVDEMFDVMY 408
TFDE+LKKLVDEMFDVMY
Sbjct: 100 DTFDENLKKLVDEMFDVMY 118
>ref|XP_009618059.1| PREDICTED: peptide deformylase 1B, chloroplastic [Nicotiana
tomentosiformis]
ref|XP_016486285.1| PREDICTED: peptide deformylase 1B, chloroplastic-like [Nicotiana
tabacum]
Length = 277
Score = 102 bits (254), Expect = 8e-24
Identities = 56/85 (65%), Positives = 62/85 (72%)
Frame = +1
Query: 154 AGAGFHTLSSNLYKPLVRPVIAQARRSFSPMAKEAAVASAADLLFEGPLKIVEYPDPILR 333
AG F + SSN KP V AQARR K +AS ADL FEGPLKIVEYPDPILR
Sbjct: 39 AGCLFFSTSSN--KPPKFTVYAQARRVLPSKTKGDELASPADLCFEGPLKIVEYPDPILR 96
Query: 334 AKNKRVKTFDESLKKLVDEMFDVMY 408
AKNKR+ TFD++LKKLVDEMFD+MY
Sbjct: 97 AKNKRIGTFDDNLKKLVDEMFDIMY 121