BLASTX nr result
ID: Rehmannia32_contig00001764
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia32_contig00001764
(1223 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PRQ41601.1| putative tripeptidyl-peptidase II [Rosa chinensis] 69 1e-19
gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinen... 69 1e-19
gb|AJE29370.1| putative gag protein [Coffea canephora] 72 9e-19
gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense] 47 1e-16
gb|PHU12529.1| hypothetical protein BC332_19459 [Capsicum chinense] 44 7e-15
gb|PNR28435.1| hypothetical protein PHYPA_029027, partial [Physc... 80 2e-14
emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera] 50 3e-13
gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subc... 54 4e-13
gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subc... 47 7e-13
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro... 43 1e-11
emb|CDP17738.1| unnamed protein product [Coffea canephora] 40 1e-11
ref|XP_011459790.1| PREDICTED: uncharacterized protein LOC105350... 41 1e-11
gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium bar... 43 6e-11
gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium bar... 43 6e-11
gb|ESR45251.1| hypothetical protein CICLE_v10003098mg [Citrus cl... 71 1e-10
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group] 40 1e-10
gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposo... 40 1e-10
dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group] 43 2e-10
gb|PRQ56251.1| putative RNA-directed DNA polymerase [Rosa chinen... 46 2e-10
emb|CAN66743.1| hypothetical protein VITISV_043469 [Vitis vinifera] 48 4e-10
>gb|PRQ41601.1| putative tripeptidyl-peptidase II [Rosa chinensis]
Length = 1371
Score = 55.1 bits (131), Expect(4) = 1e-19
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDI 906
G+G VKIKM DG RTLG V YVP+ R NL+S Q+DS C +
Sbjct: 517 GVGTVKIKMFDGAVRTLGDVVYVPRFRRNLVSLSQLDSKGCRV 559
Score = 42.7 bits (99), Expect(4) = 1e-19
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +2
Query: 614 YLTVSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
+LTVS T S+ WILD+G H+ SR +YFD FQ + G ++ GDG+ +MG+
Sbjct: 463 FLTVSKGNYTCSQRDWILDTGSSHHLCSRREYFDTFQ-EVKGFVTWGDGTRRCVMGV 518
Score = 34.3 bits (77), Expect(4) = 1e-19
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITGSGSAPEGFQGADGC 1052
R S+ GG +KI+RG VL EK +++RL+ T S EG + A GC
Sbjct: 558 RVSSAGGAMKISRGCMVLMKGEKCGSMFRLIGKTQT---SKVEGKRCARGC 605
Score = 33.9 bits (76), Expect(4) = 1e-19
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 315 RDTRLGAYIKASLLSHKKKKENQEEGHGYALVAREMNR*-REGFWWWICNQQVRFKDQGK 491
+DT ++++LL+H+K+++ ++ VA++ NR R + + + + +GK
Sbjct: 360 KDTLKMEEVESTLLNHEKRRK-ADDSQISVFVAQDQNRWGRSTARGSSGHSRSKSRGRGK 418
Query: 492 GVVCYRYHEKDHVKRNCPRRKK 557
G CY+ E H++ +CP K+
Sbjct: 419 GKQCYKCKEWGHIRPDCPLWKE 440
Score = 68.6 bits (166), Expect = 1e-08
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = +1
Query: 52 FKVQQFDGKGNFTPWQ*RVKDLLVQRGLAMALKGKEEKLTDMKGAQWANLD 204
FKV+QFDGKGNFT WQ RVKD+LVQ+GLA LKGK+ K M W L+
Sbjct: 199 FKVEQFDGKGNFTLWQRRVKDILVQQGLAKPLKGKDAKPVKMSDEDWEELE 249
Score = 67.8 bits (164), Expect = 2e-08
Identities = 45/124 (36%), Positives = 67/124 (54%)
Frame = +1
Query: 115 LLVQRGLAMALKGKEEKLTDMKGAQWANLDQLGKVGVKVEEEDKTLLLLTSIPDSYDSLV 294
L ++R L G+ L + +DQL KV VK+EEED+ LLLLTS+PDSY++++
Sbjct: 294 LNLKRDLYKLKMGEGASLMEHMNVFRGLVDQLAKVDVKIEEEDQALLLLTSLPDSYENII 353
Query: 295 MTLLYGKETLDWEHI*KHRCCPIKKKRKTRRRGMDMLWLLGK*IGNGRDSGGGSVISRSD 474
T+LYGK+TL E + + +K+RK + + + + G S SRS
Sbjct: 354 TTILYGKDTLKMEEV-ESTLLNHEKRRKADDSQISVFVAQDQNRWGRSTARGSSGHSRSK 412
Query: 475 SRTR 486
SR R
Sbjct: 413 SRGR 416
>gb|PRQ51350.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 460
Score = 55.1 bits (131), Expect(4) = 1e-19
Identities = 25/43 (58%), Positives = 30/43 (69%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDI 906
G+G VKIKM DG RTLG V YVP+ R NL+S Q+DS C +
Sbjct: 327 GVGTVKIKMFDGAVRTLGDVVYVPRFRRNLVSLSQLDSKGCRV 369
Score = 42.7 bits (99), Expect(4) = 1e-19
Identities = 25/57 (43%), Positives = 36/57 (63%)
Frame = +2
Query: 614 YLTVSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
+LTVS T S+ WILD+G H+ SR +YFD FQ + G ++ GDG+ +MG+
Sbjct: 273 FLTVSKGNYTCSQRDWILDTGSSHHLCSRREYFDTFQ-EVKGFVTWGDGTRRCVMGV 328
Score = 34.3 bits (77), Expect(4) = 1e-19
Identities = 21/51 (41%), Positives = 29/51 (56%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITGSGSAPEGFQGADGC 1052
R S+ GG +KI+RG VL EK +++RL+ T S EG + A GC
Sbjct: 368 RVSSAGGAMKISRGCMVLMKGEKCGSMFRLIGKTQT---SKVEGKRCARGC 415
Score = 33.9 bits (76), Expect(4) = 1e-19
Identities = 21/82 (25%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
Frame = +3
Query: 315 RDTRLGAYIKASLLSHKKKKENQEEGHGYALVAREMNR*-REGFWWWICNQQVRFKDQGK 491
+DT ++++LL+H+K+++ ++ VA++ NR R + + + + +GK
Sbjct: 170 KDTLKMEEVESTLLNHEKRRK-ADDSQISVFVAQDQNRWGRSTARGSSGHSRSKSRGRGK 228
Query: 492 GVVCYRYHEKDHVKRNCPRRKK 557
G CY+ E H++ +CP K+
Sbjct: 229 GKQCYKCKEWGHIRPDCPLWKE 250
Score = 68.6 bits (166), Expect = 8e-09
Identities = 32/51 (62%), Positives = 37/51 (72%)
Frame = +1
Query: 52 FKVQQFDGKGNFTPWQ*RVKDLLVQRGLAMALKGKEEKLTDMKGAQWANLD 204
FKV+QFDGKGNFT WQ RVKD+LVQ+GLA LKGK+ K M W L+
Sbjct: 9 FKVEQFDGKGNFTLWQRRVKDILVQQGLAKPLKGKDAKPVKMSDEDWEELE 59
Score = 67.8 bits (164), Expect = 1e-08
Identities = 45/124 (36%), Positives = 67/124 (54%)
Frame = +1
Query: 115 LLVQRGLAMALKGKEEKLTDMKGAQWANLDQLGKVGVKVEEEDKTLLLLTSIPDSYDSLV 294
L ++R L G+ L + +DQL KV VK+EEED+ LLLLTS+PDSY++++
Sbjct: 104 LNLKRDLYKLKMGEGASLMEHMNVFRGLVDQLAKVDVKIEEEDQALLLLTSLPDSYENII 163
Query: 295 MTLLYGKETLDWEHI*KHRCCPIKKKRKTRRRGMDMLWLLGK*IGNGRDSGGGSVISRSD 474
T+LYGK+TL E + + +K+RK + + + + G S SRS
Sbjct: 164 TTILYGKDTLKMEEV-ESTLLNHEKRRKADDSQISVFVAQDQNRWGRSTARGSSGHSRSK 222
Query: 475 SRTR 486
SR R
Sbjct: 223 SRGR 226
>gb|AJE29370.1| putative gag protein [Coffea canephora]
Length = 433
Score = 67.0 bits (162), Expect(2) = 9e-19
Identities = 31/47 (65%), Positives = 41/47 (87%)
Frame = +1
Query: 199 LDQLGKVGVKVEEEDKTLLLLTSIPDSYDSLVMTLLYGKETLDWEHI 339
LDQL KVGV +EEE+K LLLLT + DSY+S+V TLLYGK+TL++E++
Sbjct: 132 LDQLQKVGVDIEEENKALLLLTPVSDSYESVVTTLLYGKDTLEFENV 178
Score = 56.6 bits (135), Expect(2) = 9e-19
Identities = 80/275 (29%), Positives = 112/275 (40%), Gaps = 10/275 (3%)
Frame = +3
Query: 315 RDTRLGAYIKASLLSHKK-KKENQEEGHGYALVAREMNR*REGFWWWICNQQVRFKDQGK 491
+DT +++SLL H+K +K NQ+ AL+AR N+ + F + K +G
Sbjct: 170 KDTLEFENVQSSLLDHEKQRKANQDVTQEAALIARGENKRGKQFGGESKAGGSKAKRKG- 228
Query: 492 GVVCYRYHEKDHVKRNCPRRKKXXXXXXXXXXAVIAAEVGDISQSPQGLILLLEIDGF*I 671
G+ C+ HE H+KR CP +KK A GDI +G DG+ I
Sbjct: 229 GIQCFGCHEFGHIKRYCPHQKKNDENDYDGVAGY--ASGGDILTISKGNNTSSR-DGW-I 284
Query: 672 RDA*C---MCTLE*IILIYFNCRGRELCPRVMVLFVESWDWSG------KNQNG*WSGPY 824
D+ C +C+ L YF+ R+ + + + G K NG
Sbjct: 285 LDSGCVSHVCSR----LDYFDTLQRKKAGFMCLGDGSTCQVKGVGVVKIKMLNG--EIRS 338
Query: 825 FGWCGLCPKDADESNFLVPSGFQQLRYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRI 1004
G PK L + +SA GVLKIT G VL M +KY NLY L TS
Sbjct: 339 LGGVAYVPKLRRNLISLNQLDSEGYHFSAASGVLKITYGETVLLMGKKYGNLYHLNTSMD 398
Query: 1005 TGSGSAPEGFQGADGCEGNPAGREDGSRSSLSAVN 1109
+ Q +G E +G LS VN
Sbjct: 399 WEQNGIQKCSQITNGGERKNPAMGEGELRPLSRVN 433
Score = 72.4 bits (176), Expect = 4e-10
Identities = 33/56 (58%), Positives = 42/56 (75%)
Frame = +2
Query: 617 LTVSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
LT+S +TSSRD WILDSGCV HV SR+DYFD Q ++AG + GDGS C++ G+
Sbjct: 269 LTISKGNNTSSRDGWILDSGCVSHVCSRLDYFDTLQRKKAGFMCLGDGSTCQVKGV 324
>gb|PNX74094.1| copia LTR rider, partial [Trifolium pratense]
Length = 876
Score = 46.6 bits (109), Expect(4) = 1e-16
Identities = 20/42 (47%), Positives = 32/42 (76%)
Frame = +1
Query: 199 LDQLGKVGVKVEEEDKTLLLLTSIPDSYDSLVMTLLYGKETL 324
L L ++ V++++EDK ++LL S+P SYD LV TL YGK+++
Sbjct: 58 LTDLTRLRVQMDDEDKAIILLCSLPGSYDHLVTTLTYGKDSI 99
Score = 41.2 bits (95), Expect(4) = 1e-16
Identities = 23/64 (35%), Positives = 31/64 (48%)
Frame = +2
Query: 593 DSCGSWRYLTVSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICR 772
DSC L VS+ + D WILDSGC H+ ++F F+ G + GD C
Sbjct: 190 DSCSEGDILCVSS---SKCTDAWILDSGCSYHMTPNREWFTTFRSGSFGFVYLGDDKACA 246
Query: 773 IMGL 784
I G+
Sbjct: 247 ITGI 250
Score = 40.4 bits (93), Expect(4) = 1e-16
Identities = 20/39 (51%), Positives = 25/39 (64%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSN 894
GIG +KI M DG RTL V Y+P++R NLIS + N
Sbjct: 249 GIGQIKIAMDDGGVRTLTNVRYIPELRKNLISLGTLQEN 287
Score = 26.9 bits (58), Expect(4) = 1e-16
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 7/80 (8%)
Frame = +3
Query: 339 IKASLLSHKKKKENQEEG-HGYALVA-----REMNR*REGFWWWICNQQVRFKDQG-KGV 497
I ++LLSH ++++N E G G L R N+ + G + + R K + K
Sbjct: 104 ITSALLSHGQRRQNAEGGSQGEGLYVQGCSDRGRNKGKAG------SGKKRSKSKNRKTS 157
Query: 498 VCYRYHEKDHVKRNCPRRKK 557
CY + H KR+CP K+
Sbjct: 158 ECYSCKQIGHWKRDCPNIKQ 177
>gb|PHU12529.1| hypothetical protein BC332_19459 [Capsicum chinense]
Length = 448
Score = 44.3 bits (103), Expect(4) = 7e-15
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSC 900
G G V+IKM DG+ RTL V YVP+++ NLIS ++S C
Sbjct: 141 GTGTVRIKMHDGIVRTLKNVRYVPELKKNLISLGTLESFGC 181
Score = 38.1 bits (87), Expect(4) = 7e-15
Identities = 17/37 (45%), Positives = 24/37 (64%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITG 1010
+Y+ GGV +++RGG V+ KY LY L+ S ITG
Sbjct: 182 KYTGEGGVFEVSRGGLVVMKARKYGTLYTLLGSTITG 218
Score = 35.0 bits (79), Expect(4) = 7e-15
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 623 VSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMG 781
V+ I S+ + WILDS C H+ D F + G + G+ C+I+G
Sbjct: 90 VTENISCSNNE-WILDSACSFHMCPNKDLFSTYDPVEGGVILVGNNVACKIVG 141
Score = 32.0 bits (71), Expect(4) = 7e-15
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 459 NQQVRFKDQGKGVVCYRYHEKDHVKRNCPRRKKXXXXXXXXXXAVIAAEVGDISQSPQGL 638
N++ RF + VCY H+K H+K NCP+ + AE + +G
Sbjct: 31 NEKSRFSNS----VCYYCHKKGHIKFNCPKLQNKGKVKKNEHGDSDTAEASVAADEIEGA 86
Query: 639 ILLL 650
I L+
Sbjct: 87 IFLV 90
>gb|PNR28435.1| hypothetical protein PHYPA_029027, partial [Physcomitrella patens]
Length = 142
Score = 80.5 bits (197), Expect = 2e-14
Identities = 44/94 (46%), Positives = 58/94 (61%)
Frame = +1
Query: 55 KVQQFDGKGNFTPWQ*RVKDLLVQRGLAMALKGKEEKLTDMKGAQWANLDQLGKVGVKVE 234
+V++FDGK NF WQ RVKDL VQ+G +L A + L + VK+E
Sbjct: 7 EVEKFDGKNNFGLWQLRVKDLFVQKG--------RRRLMGYLNAVNCIICDLSSIDVKIE 58
Query: 235 EEDKTLLLLTSIPDSYDSLVMTLLYGKETLDWEH 336
EED+ L+LLT +P S+ LVMTLLYGKETL ++
Sbjct: 59 EEDRVLMLLTLLPPSFKHLVMTLLYGKETLSKQY 92
>emb|CAN63293.1| hypothetical protein VITISV_025722 [Vitis vinifera]
Length = 347
Score = 50.4 bits (119), Expect(3) = 3e-13
Identities = 25/51 (49%), Positives = 33/51 (64%)
Frame = +1
Query: 52 FKVQQFDGKGNFTPWQ*RVKDLLVQRGLAMALKGKEEKLTDMKGAQWANLD 204
F V +FDG GNF+ W RVKDLLVQ+G+ AL GK+ + M W +L+
Sbjct: 9 FDVVKFDGSGNFSLWHRRVKDLLVQQGMVKALYGKQPE--GMNDIDWKDLE 57
Score = 40.0 bits (92), Expect(3) = 3e-13
Identities = 27/93 (29%), Positives = 46/93 (49%), Gaps = 5/93 (5%)
Frame = +3
Query: 294 DDVVVRKRDTRLGAYIKASLLS---HKKKKENQEEGHGYALVARE-MNR*REGFWWWICN 461
+D+ + + ++ A I+ L + + KK N E G L+ + R R F N
Sbjct: 49 NDIDWKDLEAKVAATIRLCLANDVMYHMKKANDESSQGERLMVKSNQERGRNKFRSESSN 108
Query: 462 QQVRFKDQG-KGVVCYRYHEKDHVKRNCPRRKK 557
+ R K + K + CY+ +K H+KR+CP +KK
Sbjct: 109 NKSRSKSKKRKDIQCYKCGKKGHMKRDCPEKKK 141
Score = 33.9 bits (76), Expect(3) = 3e-13
Identities = 19/62 (30%), Positives = 32/62 (51%)
Frame = +2
Query: 602 GSWRYLTVSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMG 781
G L+VS+ D + D WILDS C H+ D+F+ ++ +G++ G C +
Sbjct: 167 GDGDMLSVSSSSDHLT-DSWILDSTCSYHMTPNKDWFNTYRSVNSGSILMGSDVSCGVAT 225
Query: 782 LE 787
+E
Sbjct: 226 VE 227
>gb|ABA97308.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 407
Score = 53.9 bits (128), Expect(4) = 4e-13
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 37/116 (31%)
Frame = +1
Query: 103 RVKDLLVQRGLAMALKG--------------------------KEEKLTDMKGAQWANLD 204
RVKDLL Q+G + ALKG ++KL +K + A+L
Sbjct: 46 RVKDLLAQQGGSKALKGVKPAKMEDDDWEEMQLQAAATIRLCLSDQKLYGLKMQEGADLT 105
Query: 205 -----------QLGKVGVKVEEEDKTLLLLTSIPDSYDSLVMTLLYGKETLDWEHI 339
L K+ V+V++EDK ++ L S+P+SY+ +V TL YGKET+ + I
Sbjct: 106 VHVNVFNQLVTDLVKMDVEVDDEDKAIVFLCSLPESYEHVVTTLTYGKETIKTKDI 161
Score = 36.6 bits (83), Expect(4) = 4e-13
Identities = 17/32 (53%), Positives = 22/32 (68%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLIS 873
G+G VKIK+ DG + L GV +VP + NLIS
Sbjct: 299 GVGEVKIKLEDGGEHVLQGVRHVPGQKRNLIS 330
Score = 26.6 bits (57), Expect(4) = 4e-13
Identities = 13/42 (30%), Positives = 21/42 (50%)
Frame = +2
Query: 659 WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
WILDS HV R ++F ++ G + GD + +G+
Sbjct: 259 WILDSASSFHVTPRKEWFSSYKSGEFGFVYLGDDTSYPAVGV 300
Score = 26.2 bits (56), Expect(4) = 4e-13
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +3
Query: 339 IKASLLSHKKKKENQEEGHGYA--LVAREMNR*REGFWWWICNQQVRFKDQGKGVVCYRY 512
I ++LL+ + ++N+E A L+ +E + +V+ + K V C+R
Sbjct: 161 ITSALLARDQMRKNKEGETSQAEGLLVKEDH----------AGHKVKKNKKKKMVQCFRC 210
Query: 513 HEKDHVKRNCPRRK 554
E H+ R CP K
Sbjct: 211 DEWGHISRECPTLK 224
>gb|AAP53866.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 415
Score = 47.0 bits (110), Expect(3) = 7e-13
Identities = 21/44 (47%), Positives = 33/44 (75%)
Frame = +1
Query: 208 LGKVGVKVEEEDKTLLLLTSIPDSYDSLVMTLLYGKETLDWEHI 339
L K+ VK+++EDK ++LL S+P SY+ +V TL +GK+T+ E I
Sbjct: 133 LSKLDVKLDDEDKAIILLCSLPLSYEHVVTTLTHGKDTVKTEEI 176
Score = 38.1 bits (87), Expect(3) = 7e-13
Identities = 21/68 (30%), Positives = 31/68 (45%)
Frame = +3
Query: 354 LSHKKKKENQEEGHGYALVAREMNR*REGFWWWICNQQVRFKDQGKGVVCYRYHEKDHVK 533
L KK E + G +L+ ++ + G K + KG CY+ HE H++
Sbjct: 185 LRRSKKNEATKASQGKSLLVKDKHDHEAGV----------SKSKEKGARCYKCHEFGHIR 234
Query: 534 RNCPRRKK 557
RNCP KK
Sbjct: 235 RNCPLLKK 242
Score = 38.1 bits (87), Expect(3) = 7e-13
Identities = 22/61 (36%), Positives = 34/61 (55%)
Frame = +2
Query: 602 GSWRYLTVSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMG 781
GS LTVS D S + W+LDS HV S+ ++F ++ G + GDG+ R++G
Sbjct: 260 GSHEILTVS---DEMSGEAWMLDSASSYHVTSKREWFSSYKSGDFGVVYLGDGTSYRVVG 316
Query: 782 L 784
+
Sbjct: 317 V 317
>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
Length = 1309
Score = 42.7 bits (99), Expect(4) = 1e-11
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDIQLE 915
GIG V +KM DG RT+ V YVP +R NL+S +DS ++++E
Sbjct: 323 GIGSVLLKMHDGCVRTITEVRYVPDLRRNLLSIGMLDSKGFNVKIE 368
Score = 36.2 bits (82), Expect(4) = 1e-11
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 641 TSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
T+ +D W++DSGC H+ +F + +G + G+ C++MG+
Sbjct: 277 TNKQDCWVMDSGCSFHMCPIKSWFQNLVEEESGHVLLGNNRECKVMGI 324
Score = 31.2 bits (69), Expect(4) = 1e-11
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 297 DVVVRKRDTRLGAYIKASLLSHK--KKKENQEEGHGYALVAREMNR*REGFWWWICNQQV 470
D ++ ++T A +K++L S + KK E + E G L R RE +
Sbjct: 160 DTMLYGKETLTMAEVKSALNSKELHKKNETKMESTGEGLNVRGRTYKRESRNEKGGKHRS 219
Query: 471 RFKDQGKGVVCYRYHEKDHVKRNCPRRK 554
+ + +GK + C+ H++ H K++CP R+
Sbjct: 220 QSRTRGK-LKCFVCHKEGHFKKDCPDRR 246
Score = 28.1 bits (61), Expect(4) = 1e-11
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 915 GGVLKITRGGRVLRMREKYRNLYRLVTSRITGSGSAPEG 1031
GG +K+ +G + + LY L S +TGS +A G
Sbjct: 369 GGTMKVIKGSLTVMRGSQDNGLYILEASTVTGSSNAAVG 407
>emb|CDP17738.1| unnamed protein product [Coffea canephora]
Length = 798
Score = 39.7 bits (91), Expect(5) = 1e-11
Identities = 17/39 (43%), Positives = 27/39 (69%)
Frame = +1
Query: 223 VKVEEEDKTLLLLTSIPDSYDSLVMTLLYGKETLDWEHI 339
V E+ED L+LL+S+PD ++ L TLL+GKE + + +
Sbjct: 164 VNFEDEDLALMLLSSLPDEFEHLETTLLHGKENVSLDAV 202
Score = 35.4 bits (80), Expect(5) = 1e-11
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDIQL 912
GIG +K++ DG R L V YVP ++ +LIS ++S ++++
Sbjct: 349 GIGSIKLRNHDGSTRILKDVRYVPNLKRSLISLGLLESKGLEVRM 393
Score = 33.5 bits (75), Expect(5) = 1e-11
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 641 TSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
TS D WILDS C H+ ++F F+ G + G+ + C+ +G+
Sbjct: 303 TSHPDEWILDSTCTYHMTPMREWFFEFEELDGGFVYMGNDNPCKTVGI 350
Score = 24.6 bits (52), Expect(5) = 1e-11
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +3
Query: 354 LSHKKKKENQEEGHGYALVAREMNR*R-EGFWWWICNQQVRFKDQGKGVVCYRYHEKDHV 530
L + KK+ + ALVAR + + +G W + KD+ C EK H
Sbjct: 211 LRKQDKKKKKVAAADEALVARGRQQSQSKGRRGWSKSISRVAKDE-----CAFCREKGHW 265
Query: 531 KRNCPRRKK 557
K++CP+ KK
Sbjct: 266 KKDCPKLKK 274
Score = 23.5 bits (49), Expect(5) = 1e-11
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 918 GVLKITRGGRVLRMREKYRNLYRLVTSRITGSGS 1019
G+LK+T G ++ + NLY S + G+ +
Sbjct: 396 GILKVTSGALLMLKGVRKNNLYYYQGSTVVGTAA 429
>ref|XP_011459790.1| PREDICTED: uncharacterized protein LOC105350096 [Fragaria vesca
subsp. vesca]
Length = 201
Score = 41.2 bits (95), Expect(3) = 1e-11
Identities = 24/57 (42%), Positives = 35/57 (61%)
Frame = +2
Query: 614 YLTVSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
+L VS T S+ WILD+G H+ R +YFD FQ + G ++ GDG+ R+MG+
Sbjct: 14 FLMVSKGKYTCSQRDWILDTGSSNHLCFRREYFDTFQ-EVKGFVTWGDGTRRRVMGV 69
Score = 41.2 bits (95), Expect(3) = 1e-11
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDS 891
G+G VK+KM DG +LG V +VP R NL S Q+DS
Sbjct: 68 GVGTVKVKMFDGAVCSLGDVVFVPTFRRNLKSLSQLDS 105
Score = 36.6 bits (83), Expect(3) = 1e-11
Identities = 32/93 (34%), Positives = 44/93 (47%), Gaps = 23/93 (24%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMREKYRNLYRLV----TSRITGSGSAPEG-------FQGA- 1043
R S+ GGV+K++RG VL EK +++RL+ TS++ G A E F G
Sbjct: 109 RVSSAGGVMKVSRGFMVLMKGEKCGSMFRLIGKTQTSKVVGKQCAQESRYLRQVLFAGIA 168
Query: 1044 -----------DGCEGNPAGREDGSRSSLSAVN 1109
DG + NPA RE+ SL VN
Sbjct: 169 KRAGTSFQVSDDGEKVNPA-REEVKTRSLFRVN 200
>gb|PPS20553.1| hypothetical protein GOBAR_AA00016 [Gossypium barbadense]
Length = 2351
Score = 42.7 bits (99), Expect(4) = 6e-11
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 888
GIG V+IKM DG+ RTL V ++P+M+ NLIS +D
Sbjct: 827 GIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 863
Score = 34.3 bits (77), Expect(4) = 6e-11
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 659 WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
WILD+G H+ + D F ++ + +G++ G+ C++MG+
Sbjct: 788 WILDTGATFHISTSKDAFSTYE-KHSGSVLMGNDHACQVMGI 828
Score = 30.4 bits (67), Expect(4) = 6e-11
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITG 1010
RYSA GGVLK+ G + R LY L S +TG
Sbjct: 868 RYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTG 904
Score = 28.1 bits (61), Expect(4) = 6e-11
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Frame = +3
Query: 297 DVVVRKRDTRLGAYIKASLLSHKKKKENQ----EEGHGYALVAREMNR*REGFWWWICNQ 464
D ++ RD +K +L S + +K+ E G LVAR ++ + G ++
Sbjct: 664 DTMMYGRDDLTLEEVKNALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGS----SSK 719
Query: 465 QVRFKDQGKGVVCYRYHEKDHVKRNCPRRKKXXXXXXXXXXAVIAAEVGDISQSPQGLIL 644
K + CY + H+K +CP+RK+ A V D S I+
Sbjct: 720 SHPRSQSKKRIQCYYCKKYGHMKVDCPKRKEKSESQEQQND---RANVADADSSSDAEIV 776
Query: 645 LLEIDGF 665
L D +
Sbjct: 777 LAVSDSY 783
>gb|PPR84446.1| hypothetical protein GOBAR_AA36262 [Gossypium barbadense]
Length = 1841
Score = 42.7 bits (99), Expect(4) = 6e-11
Identities = 20/37 (54%), Positives = 27/37 (72%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 888
GIG V+IKM DG+ RTL V ++P+M+ NLIS +D
Sbjct: 848 GIGTVRIKMFDGIVRTLTDVRHIPEMKKNLISLSTLD 884
Score = 34.3 bits (77), Expect(4) = 6e-11
Identities = 13/42 (30%), Positives = 26/42 (61%)
Frame = +2
Query: 659 WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
WILD+G H+ + D F ++ + +G++ G+ C++MG+
Sbjct: 809 WILDTGATFHISTSKDAFSTYE-KHSGSVLMGNDHACQVMGI 849
Score = 30.4 bits (67), Expect(4) = 6e-11
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITG 1010
RYSA GGVLK+ G + R LY L S +TG
Sbjct: 889 RYSAEGGVLKVFSGALTVIRGNLERGLYFLDGSSVTG 925
Score = 28.1 bits (61), Expect(4) = 6e-11
Identities = 30/127 (23%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
Frame = +3
Query: 297 DVVVRKRDTRLGAYIKASLLSHKKKKENQ----EEGHGYALVAREMNR*REGFWWWICNQ 464
D ++ RD +K +L S + +K+ E G LVAR ++ + G ++
Sbjct: 685 DTMMYGRDDLTLEEVKNALSSSELRKKITGKVVENNEGEGLVARGRSKAKGGS----SSK 740
Query: 465 QVRFKDQGKGVVCYRYHEKDHVKRNCPRRKKXXXXXXXXXXAVIAAEVGDISQSPQGLIL 644
K + CY + H+K +CP+RK+ A V D S I+
Sbjct: 741 SHPRSQSKKRIQCYYCKKYGHMKVDCPKRKEKSESQEQQND---RANVADADSSSDAEIV 797
Query: 645 LLEIDGF 665
L D +
Sbjct: 798 LAVSDSY 804
>gb|ESR45251.1| hypothetical protein CICLE_v10003098mg [Citrus clementina]
dbj|GAY69372.1| hypothetical protein CUMW_271400 [Citrus unshiu]
Length = 182
Score = 70.9 bits (172), Expect = 1e-10
Identities = 45/142 (31%), Positives = 68/142 (47%), Gaps = 46/142 (32%)
Frame = +1
Query: 52 FKVQQFDGKGNFTPWQ*RVKDLLVQRGLAMALKGKEEKLTDMKGAQ-----WANLDQLGK 216
F++++FDG+ NF WQ +VKD+L+Q GL ALKGK ++ + W L++L +
Sbjct: 12 FEIEKFDGRINFGLWQVQVKDVLIQSGLHKALKGKPSPASNSGSGKTTKELWEKLEKLYR 71
Query: 217 -----------------------------------------VGVKVEEEDKTLLLLTSIP 273
+GVK+E+ DK L LL S+P
Sbjct: 72 TKSISNRLYLKERFHTLRMTEGTKIFDHLSVLNGIVLELEAIGVKIEDGDKALRLLWSLP 131
Query: 274 DSYDSLVMTLLYGKETLDWEHI 339
SY L+ TL+YGKET++ E +
Sbjct: 132 TSYKHLLPTLMYGKETVNLEEV 153
>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1241
Score = 40.4 bits (93), Expect(3) = 1e-10
Identities = 19/37 (51%), Positives = 26/37 (70%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 888
GIG V+IKM DG RTL V ++P ++ +LIS C +D
Sbjct: 249 GIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLD 285
Score = 39.3 bits (90), Expect(3) = 1e-10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 653 D*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
D WILD+ C H+ D+F ++ + GT+ GD + C + G+
Sbjct: 207 DQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGI 250
Score = 35.8 bits (81), Expect(3) = 1e-10
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 1022
+YS G G+LK+T+G V+ + KY NLY L + I G+ +A
Sbjct: 290 KYSGGDGILKVTKGSLVVMKADIKYANLYHLRGTTILGNVAA 331
>gb|KYP71220.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
[Cajanus cajan]
Length = 690
Score = 39.7 bits (91), Expect(3) = 1e-10
Identities = 18/46 (39%), Positives = 27/46 (58%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVDSNSCDIQLE 915
GIG ++IK DG +TL V ++P ++ NLIS ++S C E
Sbjct: 327 GIGTIQIKTHDGTIKTLSNVRFIPDLKRNLISLGTLESLGCKYSAE 372
Score = 38.9 bits (89), Expect(3) = 1e-10
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +2
Query: 623 VSTRIDTSSRD*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
+S D S+ WILDSGC H+ D F + +G + G+ + C+I G+
Sbjct: 275 ISVSSDKRSKTEWILDSGCTFHMCPYKDLFTTLEPVDSGVVLMGNDTQCKIAGI 328
Score = 37.0 bits (84), Expect(3) = 1e-10
Identities = 19/49 (38%), Positives = 27/49 (55%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMREKYRNLYRLVTSRITGSGSAPEGFQGAD 1046
+YSA GGVLK+++G VL + +LY L S +TGS + D
Sbjct: 368 KYSAEGGVLKVSKGAIVLLKANRIGSLYILQGSIVTGSAAVSSSMSDKD 416
>dbj|BAH90873.1| Os01g0116166 [Oryza sativa Japonica Group]
Length = 778
Score = 43.1 bits (100), Expect(3) = 2e-10
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 888
GIG V+IKM DG RTL V ++P ++ +LIS+C +D
Sbjct: 306 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLD 342
Score = 39.3 bits (90), Expect(3) = 2e-10
Identities = 15/44 (34%), Positives = 25/44 (56%)
Frame = +2
Query: 653 D*WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
D WILD+ C H+ D+F ++ + GT+ GD + C + G+
Sbjct: 264 DQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGI 307
Score = 32.3 bits (72), Expect(3) = 2e-10
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Frame = +3
Query: 900 RYSAGGGVLKITRGGRVLRMRE-KYRNLYRLVTSRITGSGSA 1022
+YS G G+LK+T+G V+ + K NLY L + I G+ +A
Sbjct: 347 KYSGGDGILKVTKGSLVVMKADIKSANLYHLRGTTILGNVAA 388
>gb|PRQ56251.1| putative RNA-directed DNA polymerase [Rosa chinensis]
Length = 392
Score = 45.8 bits (107), Expect(3) = 2e-10
Identities = 23/37 (62%), Positives = 27/37 (72%)
Frame = +1
Query: 778 GIGVVKIKMGDGVDRTLGGVAYVPKMRMNLISWCQVD 888
GIG VKI+M DGV RTL V Y+PK+R NLIS +D
Sbjct: 354 GIGSVKIRMHDGVVRTLENVRYIPKLRKNLISLGTLD 390
Score = 45.4 bits (106), Expect(3) = 2e-10
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +2
Query: 659 WILDSGCVMHVYSRIDYFDLFQLQRAGTLSSGDGSICRIMGL 784
WILD+GC H+ + ++FD F+ +G + GD S CRI+G+
Sbjct: 314 WILDTGCTFHMCAIREWFDTFEDSSSGEVFRGDDSSCRILGI 355
Score = 23.5 bits (49), Expect(3) = 2e-10
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 501 CYRYHEKDHVKRNCPRRK 554
C++ DH+KRNC K
Sbjct: 258 CFKCGATDHLKRNCREGK 275
>emb|CAN66743.1| hypothetical protein VITISV_043469 [Vitis vinifera]
Length = 798
Score = 47.8 bits (112), Expect(2) = 4e-10
Identities = 24/49 (48%), Positives = 35/49 (71%), Gaps = 2/49 (4%)
Frame = +1
Query: 199 LDQLGKVGVKVEEEDKTLLLLTSIPDS--YDSLVMTLLYGKETLDWEHI 339
+ L ++ VK E++DK L+ L S+P S Y++LV TL++GKETLD E I
Sbjct: 42 ISDLKQIDVKFEDKDKALMXLNSLPVSSTYENLVTTLMWGKETLDLEEI 90
Score = 46.6 bits (109), Expect(2) = 4e-10
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 3/76 (3%)
Frame = +3
Query: 339 IKASLLS-HKKKKENQEEGHGYALVA-REMNR*REGFWWWICNQQVRFKDQG-KGVVCYR 509
I ++LL +++KK N E G L+A R R R F + N + RF+ + K + CY+
Sbjct: 90 ITSALLGLNQRKKANDESSQGEGLMAKRNQERERNKFRSELSNNKSRFESKKIKDIQCYK 149
Query: 510 YHEKDHVKRNCPRRKK 557
+K H+KR+CP +KK
Sbjct: 150 CGKKGHMKRDCPEKKK 165