BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00001675
         (984 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygro...   300   3e-97
ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotei...   277   4e-85
gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposo...   234   1e-69
dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subt...   243   3e-69
gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposo...   234   3e-67
gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposo...   228   3e-67
gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposo...   231   4e-67
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]   238   4e-67
gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposo...   236   4e-67
gb|PNX96445.1| copia LTR rider [Trifolium pratense]                   235   4e-66
dbj|GAU10233.1| hypothetical protein TSUD_417410 [Trifolium subt...   233   7e-66
gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygro...   234   1e-65
emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]   231   1e-64
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]   231   1e-64
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc...   227   3e-63
dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]            227   3e-63
gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...   227   3e-63
gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposo...   226   3e-63
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc...   227   4e-63
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-...   227   4e-63

>gb|KZV34961.1| hypothetical protein F511_04935 [Dorcoceras hygrometricum]
          Length = 345

 Score =  300 bits (768), Expect = 3e-97
 Identities = 144/174 (82%), Positives = 155/174 (89%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           YFLS+IDDFSRKVWVFLLKNKSDVFD FK WKTL ENQTGKKIK LRTDNGLEFCN LFD
Sbjct: 125 YFLSIIDDFSRKVWVFLLKNKSDVFDSFKNWKTLTENQTGKKIKTLRTDNGLEFCNSLFD 184

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
            LC   GIKRHKT PYTPQQNGV ERMNRTLLERVRSML  SGLSKKFWGE VLTAA++I
Sbjct: 185 ELCEQCGIKRHKTNPYTPQQNGVVERMNRTLLERVRSMLVSSGLSKKFWGECVLTAAFLI 244

Query: 622 NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           NRSPSVPL GK PE V++GKEID+S+L+ FGC+AFAH++ DKLEPRAVKCVFLG
Sbjct: 245 NRSPSVPLDGKCPESVWSGKEIDYSHLRTFGCTAFAHKRGDKLEPRAVKCVFLG 298


>ref|XP_012849888.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Erythranthe guttata]
          Length = 598

 Score =  277 bits (708), Expect = 4e-85
 Identities = 133/174 (76%), Positives = 152/174 (87%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           YFLS+IDD+SRKV+VFLLK KSDVFD FK WKTLIENQTGK+IK LRTDNG+EFCN  FD
Sbjct: 227 YFLSIIDDYSRKVFVFLLKQKSDVFDKFKTWKTLIENQTGKRIKTLRTDNGIEFCNLEFD 286

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
           NLCA+SGI+RHK+V +TPQQNGVAERMNRTLLERVRSML  SGL K FWGEA+LTA Y+I
Sbjct: 287 NLCANSGIRRHKSVVHTPQQNGVAERMNRTLLERVRSMLTSSGLPKLFWGEAILTATYLI 346

Query: 622 NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           NRSPS+PL+G +PE V+ GK++D SNL VFG +AF H K DKLEPR VKC+FLG
Sbjct: 347 NRSPSMPLNGDLPESVWCGKKVDLSNLHVFGYAAFVHHKGDKLEPRFVKCIFLG 400



 Score = 77.4 bits (189), Expect = 6e-12
 Identities = 37/80 (46%), Positives = 56/80 (70%), Gaps = 3/80 (3%)
 Frame = -2

Query: 236 PVLPENHDDDAVHDEILDENE--PENENLHDYQLVRDRARR-NIRQPARFDDFHMTSFVF 66
           P+  ++  D  + + + D+    P  ++L DYQL RDR RR ++R+P  FDDFH+ S VF
Sbjct: 455 PIKSDDVSDSELSENLQDQTVELPNVDDLSDYQLARDRPRREHVRKPKHFDDFHLASHVF 514

Query: 65  SVFDSIDNSEPKSYEEALKS 6
           +VF+S+D +EPKSY++ALKS
Sbjct: 515 NVFESLDGNEPKSYKDALKS 534


>gb|KYP36391.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 498

 Score =  234 bits (597), Expect = 1e-69
 Identities = 109/174 (62%), Positives = 139/174 (79%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           YFL++IDDF+R+VW+++LK+K++ +  F+ W TLI+NQ   K+K+LRTDNGLEF ++ F 
Sbjct: 94  YFLTIIDDFTRRVWLYVLKDKTETYKKFRDWYTLIQNQLETKLKVLRTDNGLEFLSEQFA 153

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
             C + GIKRH+TVP+TPQQNG+AERMNRT+LERVR ML  SGLSKKFWGEA  TAAY+I
Sbjct: 154 EFCRNQGIKRHRTVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAATTAAYLI 213

Query: 622 NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           NR PS  L+ K P   + GK +D+SNL+VFG  A+AH K  KLEPRAVKCVF+G
Sbjct: 214 NRCPSSALNNKTPMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIG 267


>dbj|GAU46320.1| hypothetical protein TSUD_401910 [Trifolium subterraneum]
          Length = 1006

 Score =  243 bits (619), Expect = 3e-69
 Identities = 116/174 (66%), Positives = 139/174 (79%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           YFLS+IDD+SR+VWV ++KNKSDVF+ FK+W TLIENQ G K+K+LRTDNGLEF ++ F+
Sbjct: 323 YFLSIIDDYSRRVWVHIIKNKSDVFEKFKEWHTLIENQIGTKLKVLRTDNGLEFVSEQFN 382

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
             C   GIKRH+TV YTPQQNG+AERMNRTLLERVR ML  +GL K FWGEAV TAAY+I
Sbjct: 383 EFCRKKGIKRHRTVAYTPQQNGLAERMNRTLLERVRYMLLGAGLPKSFWGEAVNTAAYLI 442

Query: 622 NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           NR PS  +  K P  V++GK  D+S LK+FG  AFAH K DKL+ RAVKCVF+G
Sbjct: 443 NRCPSAGIDLKTPMEVWSGKPADYSKLKIFGALAFAHVKQDKLDDRAVKCVFIG 496


>gb|KYP64673.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus
            cajan]
          Length = 780

 Score =  234 bits (597), Expect = 3e-67
 Identities = 109/174 (62%), Positives = 139/174 (79%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            YFL++IDDF+R+VW+++LK+K++ +  F+ W TLI+NQ   K+K+LRTDNGLEF ++ F 
Sbjct: 497  YFLTIIDDFTRRVWLYVLKDKTETYKKFRDWYTLIQNQLETKLKVLRTDNGLEFLSEQFA 556

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
              C + GIKRH+TVP+TPQQNG+AERMNRT+LERVR ML  SGLSKKFWGEA  TAAY+I
Sbjct: 557  EFCRNQGIKRHRTVPHTPQQNGLAERMNRTILERVRCMLLGSGLSKKFWGEAATTAAYLI 616

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NR PS  L+ K P   + GK +D+SNL+VFG  A+AH K  KLEPRAVKCVF+G
Sbjct: 617  NRCPSSALNNKTPMEAWHGKPVDYSNLRVFGSLAYAHVKEGKLEPRAVKCVFIG 670


>gb|KYP63308.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 516

 Score =  228 bits (582), Expect = 3e-67
 Identities = 104/174 (59%), Positives = 135/174 (77%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           YFLS++DDFSRKVWV+ LK K++VFD FK+WK L+E Q G+ +K LRTDNGLEFC++ F 
Sbjct: 41  YFLSIVDDFSRKVWVYFLKQKNEVFDRFKEWKVLVETQIGRNLKKLRTDNGLEFCDEKFS 100

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
             C ++G+ RHKTV  TPQ+NG+ ER NRT+LERVR ML  +GL K FW EAV +A Y I
Sbjct: 101 KFCRENGVARHKTVRGTPQKNGLVERFNRTILERVRCMLNHAGLPKSFWAEAVSSAVYCI 160

Query: 622 NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           NR PS  L  K P+ V++G+++D+S L+VFGC A+AH K DKLEPRA+K +F+G
Sbjct: 161 NRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIFIG 214


>gb|KYP48029.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Cajanus cajan]
          Length = 634

 Score =  231 bits (589), Expect = 4e-67
 Identities = 106/174 (60%), Positives = 137/174 (78%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           YFLS++DDFSRKVWV+ LK K++VFD FK+WK L+E QTG+ +K LRTDNGLEFC++ F 
Sbjct: 159 YFLSIVDDFSRKVWVYFLKQKNEVFDRFKEWKVLVETQTGRNLKKLRTDNGLEFCDEKFS 218

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
             C ++G+ RHKTV  TPQ+NG+AER NRT+LERVR ML  +GL K FW EAV +A Y I
Sbjct: 219 KFCRENGVARHKTVRGTPQKNGLAERFNRTILERVRCMLNHAGLPKSFWVEAVSSAVYCI 278

Query: 622 NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           NR PS  L  K P+ V++G+++D+S L+VFGC A+AH K DKLEPRA+K +F+G
Sbjct: 279 NRCPSTALEFKTPQEVWSGRKVDYSELRVFGCIAYAHIKQDKLEPRALKFIFIG 332


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score =  238 bits (607), Expect = 4e-67
 Identities = 112/174 (64%), Positives = 138/174 (79%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           YFL++IDD+SRKVW++ LKNKS+ F  FK+WK L+E QT +K+K LRTDNGLEF +  F+
Sbjct: 471 YFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFN 530

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
           +LC   GI RH+TV YTPQQNG+AERMNRT+LERVR ML+ SGLSK FW EA  TA ++I
Sbjct: 531 SLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVFWAEAAETAVHLI 590

Query: 622 NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           NRSPS  L  K P+  +TGK  D+ +LKVFGC+A+ H K DKLEPRAVKC+FLG
Sbjct: 591 NRSPSSALQFKTPQEKWTGKAADYQHLKVFGCTAYVHTKTDKLEPRAVKCIFLG 644


>gb|PKU72844.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Dendrobium catenatum]
          Length = 993

 Score =  236 bits (603), Expect = 4e-67
 Identities = 107/174 (61%), Positives = 140/174 (80%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           YFLS IDD+SRKVW+FLLK+K + F  F +WK+++ENQ  +K+K+LRTDNGLEFCN+ F+
Sbjct: 440 YFLSFIDDYSRKVWIFLLKSKDETFSKFLEWKSMVENQKNRKLKVLRTDNGLEFCNESFN 499

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
             C+DSGI RHKTV +TPQQNG+AERMNRTLL+RVR +L  SGLSK FWGEA+ TA Y++
Sbjct: 500 KFCSDSGIVRHKTVSHTPQQNGLAERMNRTLLDRVRCLLFSSGLSKFFWGEALSTACYLV 559

Query: 622 NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           NR+PS  ++ K P+ ++ GK    ++L+VFGC A+ HQ   KLEPR++KCVFLG
Sbjct: 560 NRTPSSAINFKTPQELWKGKPPSLTHLRVFGCLAYPHQNKGKLEPRSIKCVFLG 613


>gb|PNX96445.1| copia LTR rider [Trifolium pratense]
          Length = 1318

 Score =  235 bits (600), Expect = 4e-66
 Identities = 109/174 (62%), Positives = 134/174 (77%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            YFLS++DD+SRK+WVF+ K K + F+ FK WKTL+ENQTG+K+K LRTDNGLEFCN+ FD
Sbjct: 492  YFLSIVDDYSRKLWVFIQKTKDETFENFKSWKTLVENQTGRKVKRLRTDNGLEFCNEAFD 551

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
              CA SGI RH+T   TPQQNG+AER NRT+LERVR ML  +GL K FW EAV TA Y+I
Sbjct: 552  IFCAASGIARHRTTAGTPQQNGLAERFNRTILERVRCMLTSAGLKKVFWAEAVSTATYLI 611

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NR PS  L  K PE V++G   D   L+VFGC A+AH + DK+EPRA+KC+F+G
Sbjct: 612  NRCPSTALDMKTPEEVWSGHPPDLDKLRVFGCVAYAHIRQDKVEPRALKCMFMG 665


>dbj|GAU10233.1| hypothetical protein TSUD_417410 [Trifolium subterraneum]
          Length = 987

 Score =  233 bits (594), Expect = 7e-66
 Identities = 111/174 (63%), Positives = 136/174 (78%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            YFLS+IDD+SR+VWV ++KNKSD F+ FK+W TLIENQ G K+K+LRT+NGL+F ++ F+
Sbjct: 575  YFLSIIDDYSRRVWVHIIKNKSDAFEKFKEWHTLIENQIGTKLKVLRTNNGLKFVSEQFN 634

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
              C   GIKRH+TV YTPQQNG+AERMNRTLLERVR ML  +GL K FWGEAV TAAY+I
Sbjct: 635  EFCRKKGIKRHRTVAYTPQQNGLAERMNRTLLERVRCMLLGAGLPKSFWGEAVNTAAYLI 694

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NR PS  +  K P  V++ K  D+SNLK+FG  AFA  K DKL+ R VKCVF+G
Sbjct: 695  NRCPSTGIDLKTPMEVWSDKPTDYSNLKIFGALAFARVKQDKLDARVVKCVFIG 748


>gb|KZV56298.1| hypothetical protein F511_00295 [Dorcoceras hygrometricum]
          Length = 1309

 Score =  234 bits (596), Expect = 1e-65
 Identities = 111/174 (63%), Positives = 134/174 (77%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            Y++SVIDD+SRK+WV  LK+K + F  FK WK ++E QTGKKIK LRTDNGLE+C+  F 
Sbjct: 492  YYISVIDDYSRKLWVVTLKSKDEAFKAFKDWKMMVETQTGKKIKKLRTDNGLEYCSTEFK 551

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
            + C   GI RH TVP TPQQNG+AERMNRT+LERVR MLA SGL + FW EAV+TA+Y+I
Sbjct: 552  DFCKQEGIVRHYTVPNTPQQNGLAERMNRTILERVRCMLADSGLPRMFWAEAVVTASYLI 611

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NR PS  L  K P+ V+TG   DFSNL+ FGC+AFAH + DKL+PRA KCV LG
Sbjct: 612  NRCPSTALEFKTPQEVWTGHRPDFSNLRAFGCTAFAHIRQDKLQPRAKKCVLLG 665


>emb|CAN65222.1| hypothetical protein VITISV_038665 [Vitis vinifera]
          Length = 1562

 Score =  231 bits (590), Expect = 1e-64
 Identities = 107/174 (61%), Positives = 136/174 (78%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            Y+++ IDDFSRKVWV+ LK K +VF  FK+WKT++E +TGK +K LRTDNGLEFCN+ FD
Sbjct: 612  YYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFD 671

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
              C   GI RH+TV +TPQQNGVAERMN+TL++R R M   +GLSKKFW EAV TAAY++
Sbjct: 672  EFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLV 731

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NRSPS  +  K P+ V++GK  ++S LK+FGC A+AH    KLEPRA+KC+FLG
Sbjct: 732  NRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLG 785


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score =  231 bits (590), Expect = 1e-64
 Identities = 107/174 (61%), Positives = 136/174 (78%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            Y+++ IDDFSRKVWV+ LK K +VF  FK+WKT++E +TGK +K LRTDNGLEFCN+ FD
Sbjct: 825  YYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFD 884

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
              C   GI RH+TV +TPQQNGVAERMN+TL++R R M   +GLSKKFW EAV TAAY++
Sbjct: 885  EFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKFWAEAVNTAAYLV 944

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NRSPS  +  K P+ V++GK  ++S LK+FGC A+AH    KLEPRA+KC+FLG
Sbjct: 945  NRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGCPAYAHVSDGKLEPRAMKCIFLG 998


>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  227 bits (579), Expect = 3e-63
 Identities = 104/174 (59%), Positives = 133/174 (76%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            Y L+VIDD+SRKVW + LK+K D F  FK WK +IE QT +K+K+LRTDNG EFC+  F+
Sbjct: 505  YMLTVIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFN 564

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
            + C   GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++K+FW EA  TA Y+I
Sbjct: 565  DYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLI 624

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NRSPS+PL+ K P  V++G   D+S LKVFGC+A+AH    KLEPRAVKC+FLG
Sbjct: 625  NRSPSIPLNKKTPIEVWSGMPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLG 678


>dbj|BAF27642.2| Os11g0157000 [Oryza sativa Japonica Group]
          Length = 1601

 Score =  227 bits (579), Expect = 3e-63
 Identities = 100/174 (57%), Positives = 137/174 (78%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            Y ++++DD+SRKVW + LK+K   FDVFK+WKT++E QT +K+KILRTDNG+EFC+++F 
Sbjct: 513  YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 572

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
            + C   GI RH TVP+TPQQNGVAERMNRT++ + R +L+ +GL K+FW EAV TA Y+I
Sbjct: 573  SYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLI 632

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NRSPS  +  K P  V++G   ++S+L+VFGC+A+AH    KLEPRA+KC+FLG
Sbjct: 633  NRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLG 686


>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA91548.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 2340

 Score =  227 bits (579), Expect = 3e-63
 Identities = 100/174 (57%), Positives = 137/174 (78%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            Y ++++DD+SRKVW + LK+K   FDVFK+WKT++E QT +K+KILRTDNG+EFC+++F 
Sbjct: 720  YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 779

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
            + C   GI RH TVP+TPQQNGVAERMNRT++ + R +L+ +GL K+FW EAV TA Y+I
Sbjct: 780  SYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQFWAEAVSTACYLI 839

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NRSPS  +  K P  V++G   ++S+L+VFGC+A+AH    KLEPRA+KC+FLG
Sbjct: 840  NRSPSYAIDKKTPIEVWSGSPANYSDLRVFGCTAYAHVDNGKLEPRAIKCIFLG 893


>gb|KYP48513.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1032

 Score =  226 bits (576), Expect = 3e-63
 Identities = 105/176 (59%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
 Frame = -3

Query: 982 YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
           Y +++IDDFSRKVWV+ L++K++ F  FK+WKTL+E QTGKK+K LRTDNGLEFC   F+
Sbjct: 202 YMMTIIDDFSRKVWVYFLRHKNETFPTFKKWKTLVETQTGKKVKKLRTDNGLEFCEGDFN 261

Query: 802 NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGL--SKKFWGEAVLTAAY 629
             CA+ GI RHKT+P  PQQNGVAER+NRT+LER R ML+ +GL   ++ W EA  TA Y
Sbjct: 262 EFCANHGIARHKTIPGKPQQNGVAERLNRTILERARCMLSNAGLWHQRELWVEAASTACY 321

Query: 628 VINRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
           +INRSP   L+ KIPE +++G  ID+SNL++FGC A+AH    KL PRA+KC+FLG
Sbjct: 322 LINRSPHSSLNFKIPEEIWSGNPIDYSNLRIFGCPAYAHVNDGKLAPRAIKCIFLG 377


>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1333

 Score =  227 bits (578), Expect = 4e-63
 Identities = 103/174 (59%), Positives = 133/174 (76%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            Y L++IDD+SRKVW + LK+K D F  FK WK +IE QT +K+K+LRTDNG EFC+  F+
Sbjct: 505  YMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFN 564

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
            + C   GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++K+FW EA  TA Y+I
Sbjct: 565  DYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLI 624

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NRSPS+PL+ K P  V++G   D+S LKVFGC+A+AH    KLEPRAVKC+FLG
Sbjct: 625  NRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLG 678


>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
 gb|ABA92739.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1373

 Score =  227 bits (578), Expect = 4e-63
 Identities = 103/174 (59%), Positives = 133/174 (76%)
 Frame = -3

Query: 982  YFLSVIDDFSRKVWVFLLKNKSDVFDVFKQWKTLIENQTGKKIKILRTDNGLEFCNQLFD 803
            Y L++IDD+SRKVW + LK+K D F  FK WK +IE QT +K+K+LRTDNG EFC+  F+
Sbjct: 505  YMLTIIDDYSRKVWPYFLKHKDDTFTAFKNWKVMIERQTERKVKLLRTDNGGEFCSHAFN 564

Query: 802  NLCADSGIKRHKTVPYTPQQNGVAERMNRTLLERVRSMLACSGLSKKFWGEAVLTAAYVI 623
            + C   GI RH T+P+TPQQNGVAERMNRT++ R R ML+ + ++K+FW EA  TA Y+I
Sbjct: 565  DYCRQEGIVRHHTIPHTPQQNGVAERMNRTIISRARCMLSHARMNKRFWAEAASTACYLI 624

Query: 622  NRSPSVPLSGKIPEFVFTGKEIDFSNLKVFGCSAFAHQKLDKLEPRAVKCVFLG 461
            NRSPS+PL+ K P  V++G   D+S LKVFGC+A+AH    KLEPRAVKC+FLG
Sbjct: 625  NRSPSIPLNKKTPIEVWSGTPADYSQLKVFGCTAYAHVDNGKLEPRAVKCLFLG 678