BLASTX nr result

ID: Rehmannia32_contig00001523 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00001523
         (590 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_012848307.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g...    58   1e-06
ref|XP_012847607.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g...    56   8e-06

>ref|XP_012848307.1| PREDICTED: F-box/FBD/LRR-repeat protein At2g26030-like [Erythranthe
           guttata]
          Length = 311

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 46/131 (35%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
 Frame = +2

Query: 221 RFDNLTKLELDADWRFLTKFLESADNLEVLIICEV-------WTQNKSF*LFALFSINHF 379
           RF NL KLEL     FL+KF E+ADNLE+LI+ E+       WT      L  L   +HF
Sbjct: 131 RFRNLVKLELIGHCWFLSKFHENADNLEILILKEIVDSVLSAWTTKSFNNLTNLELTDHF 190

Query: 380 FLL*CFI-LVRGLFFLSFFGYCCYCQVDTAQKNWMEPMEERCACLLYSLRIVRIDQFGCT 556
            LL  F+     L FL   G       D  + +W    EE   CL+  LR + + +   +
Sbjct: 191 LLLSKFLENSDNLEFLFLRG------ADGKKVDWTTEPEEVPRCLISHLRTITLGENIYS 244

Query: 557 EQEFNMVRYIL 589
           +++  +VRY+L
Sbjct: 245 KEDLEIVRYLL 255


>ref|XP_012847607.1| PREDICTED: F-box/FBD/LRR-repeat protein At4g26340-like [Erythranthe
           guttata]
          Length = 438

 Score = 56.2 bits (134), Expect = 8e-06
 Identities = 40/124 (32%), Positives = 54/124 (43%)
 Frame = +2

Query: 218 VRFDNLTKLELDADWRFLTKFLESADNLEVLIICEVWTQNKSF*LFALFSINHFFLL*CF 397
           + F NL KLEL +D  FL KFLE+ADNLE+LI+ EV  +                     
Sbjct: 311 ISFHNLAKLELSSDCCFLLKFLENADNLEILILREVHEE--------------------- 349

Query: 398 ILVRGLFFLSFFGYCCYCQVDTAQKNWMEPMEERCACLLYSLRIVRIDQFGCTEQEFNMV 577
                                   K WMEP +   ACLL  LRI+++      + EF ++
Sbjct: 350 -----------------------MKGWMEP-QRVPACLLSRLRIIKLAGIKGKKHEFEII 385

Query: 578 RYIL 589
           RY+L
Sbjct: 386 RYLL 389


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