BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00000094
         (8780 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFA43534.1| replicase polyprotein [Citrus leaf blotch virus]      3331   0.0  
gb|AFA43530.1| replicase polyprotein [Citrus leaf blotch virus]      3328   0.0  
gb|AFA43527.1| replicase polyprotein [Citrus leaf blotch virus]      3326   0.0  
gb|AFA43536.1| replicase polyprotein [Citrus leaf blotch virus]      3323   0.0  
ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus...  3207   0.0  
gb|AUY61794.1| putative replicase polyprotein [Citrus leaf blotc...  3205   0.0  
gb|AUY61797.1| putative replicase polyprotein [Citrus leaf blotc...  3204   0.0  
gb|AUY61800.1| putative replicase polyprotein [Citrus leaf blotc...  3204   0.0  
gb|ACH73184.1| replicase polyprotein [Dweet mottle virus]            3204   0.0  
gb|AUY61803.1| putative replicase polyprotein [Citrus leaf blotc...  3204   0.0  
gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotc...  3201   0.0  
gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotc...  3190   0.0  
gb|AMH87249.1| replicase polyprotein [Citrus leaf blotch virus]      3184   0.0  
gb|AFA43556.1| replicase polyprotein, partial [Citrus leaf blotc...  1137   0.0  
gb|AFA43558.1| replicase polyprotein, partial [Citrus leaf blotc...  1133   0.0  
gb|AUZ97243.1| replicase [Actinidia seed-borne latent virus]          997   0.0  
gb|AKN08994.1| replicase [Caucasus prunus virus]                      991   0.0  
gb|AQQ73540.1| replicase [Apricot vein clearing associated virus]     976   0.0  
ref|YP_008997790.1| replication-associated polyprotein [Apricot ...   964   0.0  
gb|AKN09002.1| replicase [Apricot vein clearing associated virus]     972   0.0  

>gb|AFA43534.1| replicase polyprotein [Citrus leaf blotch virus]
          Length = 1987

 Score = 3331 bits (8637), Expect = 0.0
 Identities = 1596/1991 (80%), Positives = 1771/1991 (88%), Gaps = 6/1991 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDA+YNAAAQTIISHSEFRNKHFAY+L SYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENHILFD+LP VV+TSKLIMCSIKESKVL+FKNIRD+K+  
Sbjct: 61   IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKNIRDRKKDN 120

Query: 419  -VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGS-ELFSNNFIKSISG 592
                   + +   DHTSFINRL+ASKDI RYTEEADAFFSS      ELFSNNFI+ IS 
Sbjct: 121  GALGFCGKDTSASDHTSFINRLVASKDIRRYTEEADAFFSSKKKNDPELFSNNFIRCISN 180

Query: 593  KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKG 772
            KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFT+VYPPELL+KFANSQNPK+YDFKVDKG
Sbjct: 181  KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTIVYPPELLKKFANSQNPKVYDFKVDKG 240

Query: 773  RLFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTD 952
            RLFFFPDGVKTEAYEQKLNMEWLFSASH KSGD TWTVTRHKSIY+HHLFEVS GEL++D
Sbjct: 241  RLFFFPDGVKTEAYEQKLNMEWLFSASHFKSGDQTWTVTRHKSIYSHHLFEVSMGELISD 300

Query: 953  SKLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII 1132
            SK+FFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII
Sbjct: 301  SKIFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII 360

Query: 1133 GDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKN 1312
            GDDVEIKEFLFFEQFCKRLIERQTSWGLFG+SFF+KLTD+ALS MPNVVARMFPQWKKKN
Sbjct: 361  GDDVEIKEFLFFEQFCKRLIERQTSWGLFGYSFFDKLTDLALSKMPNVVARMFPQWKKKN 420

Query: 1313 TFEFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDD 1492
            TFEFLFSLGTLVVEIERRVCFEH+LEEWGFEVV+TDENAYLDPLS+FA+NENFNEERVDD
Sbjct: 421  TFEFLFSLGTLVVEIERRVCFEHILEEWGFEVVITDENAYLDPLSVFALNENFNEERVDD 480

Query: 1493 GCLERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEF 1672
            G L+RV+LPFWN  DYD KR RANKYD+LC++  EER++  +  GPHKMLQIEWYGI+EF
Sbjct: 481  GYLDRVKLPFWNLKDYDPKRGRANKYDLLCYKFEEERKNDLRERGPHKMLQIEWYGIREF 540

Query: 1673 DDPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXS 1852
            DDPFI N IS+FT+ EAL+GK++ + +YS SKQADVL KCLSF+C               
Sbjct: 541  DDPFIANGISEFTILEALIGKRIHKERYSYSKQADVLAKCLSFVCEIGGGGEGLEFVLER 600

Query: 1853 RLQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHS 2032
            RLQ AG D IE E + L ++  +   E D A   L + +   +  FIPT SD +G   H 
Sbjct: 601  RLQSAGRDPIESESEGLGKKTAESSGEADAANT-LLETQISGLVAFIPTFSD-EGESQHR 658

Query: 2033 FDNDTCEQANVANNC---EGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPM 2203
             D +   +  +       EG ++   G E  +  FEID+ DIFRP++C NTHG EIPTPM
Sbjct: 659  ADLEVESEGEIGKEESFEEGTLSCAEGHEAIK--FEIDFSDIFRPHNCMNTHGYEIPTPM 716

Query: 2204 DGNCFFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFC 2383
            DGNCFFSAF   F+CPDS+DLR++FA+WL  FDGG++ ++G+KIRP+GV+MEAELIYLFC
Sbjct: 717  DGNCFFSAFAATFDCPDSKDLRSNFADWLDTFDGGSYADMGVKIRPNGVFMEAELIYLFC 776

Query: 2384 VFREVTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPC 2563
            ++REVTL++HDR+ + E VF IH GFEEGH+VQ+G+HFLGIETY ++    +P+LS+LPC
Sbjct: 777  IYREVTLIMHDRTNDRESVFAIHLGFEEGHMVQRGDHFLGIETYRIDGFASDPNLSELPC 836

Query: 2564 GYDERLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICD 2743
            GY E L  F F+PEHFNC+QFRGRKGAFLTKVDADYGHNGMVYPHN+WVPSLDEII+ICD
Sbjct: 837  GYSEELRNFHFKPEHFNCAQFRGRKGAFLTKVDADYGHNGMVYPHNAWVPSLDEIIRICD 896

Query: 2744 QGDEFNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTA 2923
             GD+FNCALINFY  +SSLGFH+DNE+VYNDDPILTVCTEGEG  SIE KE+T+SF+MTA
Sbjct: 897  HGDDFNCALINFYGPNSSLGFHRDNERVYNDDPILTVCTEGEGFFSIEFKEQTASFLMTA 956

Query: 2924 GSFFLMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNA 3103
            GSFFLMP+G+Q++ARHSVRN  PRVS+TFRKH+RRLDGSPIAIR+DNYRN+CLI ALS A
Sbjct: 957  GSFFLMPRGFQRKARHSVRNELPRVSITFRKHIRRLDGSPIAIRQDNYRNVCLIRALSKA 1016

Query: 3104 LNRDKQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEG 3283
            LNR  Q IIAKL++VN PFWSRFLSDGNGGS+EDC AACEALGI VDL+VDGKC+V+GEG
Sbjct: 1017 LNRGMQAIIAKLKTVNNPFWSRFLSDGNGGSVEDCLAACEALGITVDLFVDGKCLVLGEG 1076

Query: 3284 GLRISLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDICAGVNYIQFA 3463
             +R+SLAL++NHFS VE HRS+QRTFVSHLAKK NL V++GLD MLQ ++  GVN +QF 
Sbjct: 1077 AVRVSLALKDNHFSVVEEHRSIQRTFVSHLAKKSNLRVMDGLDEMLQSEMSTGVNCVQFI 1136

Query: 3464 ADYENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKS 3643
            AD+E+AR LANSFLNMTTGICL R LD GEKYF HM EERPKQIGFDVTAICGFAGSGKS
Sbjct: 1137 ADFEHARVLANSFLNMTTGICLSRALDNGEKYFLHMSEERPKQIGFDVTAICGFAGSGKS 1196

Query: 3644 RQLQSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLII 3823
            RQLQSWLH+RK+GNFCVVSPR NLAADWSFKLELEPNEKRKVATFESFIKMDK KLD+I+
Sbjct: 1197 RQLQSWLHARKRGNFCVVSPRNNLAADWSFKLELEPNEKRKVATFESFIKMDKSKLDMIV 1256

Query: 3824 LDELTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGG 4003
            LDELTLFPNGYLDLL+YEL +FN+HC +ILLFDPLQARYHN+MDE +L FEHD DRLIGG
Sbjct: 1257 LDELTLFPNGYLDLLIYELDKFNSHCHLILLFDPLQARYHNKMDEAVLNFEHDVDRLIGG 1316

Query: 4004 QDIQYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLL 4183
            QD++YIYSSHRMS++FNRFFDVPCFNQAETT EQ+LWI DD+YSI S+CID+ EPCDVLL
Sbjct: 1317 QDLRYIYSSHRMSKYFNRFFDVPCFNQAETTKEQRLWILDDVYSITSVCIDQGEPCDVLL 1376

Query: 4184 VESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFC 4363
            VESDLEKKAFSP+INVMTFGESQGLTFNHVCI            RWMVALTRAKTR+SFC
Sbjct: 1377 VESDLEKKAFSPVINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRAKTRLSFC 1436

Query: 4364 STFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERL 4543
            STFLGG+DEFK+++GESLVTSIL+ + ITF+R NMMVKCNL++ EKKNGCSDEVDREERL
Sbjct: 1437 STFLGGMDEFKIKRGESLVTSILEGKQITFERSNMMVKCNLIKQEKKNGCSDEVDREERL 1496

Query: 4544 EGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQRE 4723
            EGDPFLKPFIFLG RI+K            P CQTHLYITEPNFGLCYNFDFIREKEQRE
Sbjct: 1497 EGDPFLKPFIFLGHRIQKSHDEVGEIEVREPTCQTHLYITEPNFGLCYNFDFIREKEQRE 1556

Query: 4724 YRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREE 4903
            YRE+MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAV+KRLVFREE
Sbjct: 1557 YREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVKKRLVFREE 1616

Query: 4904 EENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSI 5083
            EENYQRLS+AHLVGGLLY+NFK K+GLEF+FDQ L EESVNAFEKKKLEKSCGTIKSHSI
Sbjct: 1617 EENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLFEESVNAFEKKKLEKSCGTIKSHSI 1676

Query: 5084 RSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRN 5263
            RSD+DWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLE QIRN
Sbjct: 1677 RSDVDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLEAQIRN 1736

Query: 5264 QLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFP 5443
            QLPEEIYIHSNKNFDDLN+WVK FFQ+DICVESDYEAFDA QDEYILSFE+HLMKDAHFP
Sbjct: 1737 QLPEEIYIHSNKNFDDLNRWVKNFFQKDICVESDYEAFDACQDEYILSFEIHLMKDAHFP 1796

Query: 5444 QKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAG 5623
            Q+VIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLAN+AFTLCRYEWRRGQPIAFAG
Sbjct: 1797 QRVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANIAFTLCRYEWRRGQPIAFAG 1856

Query: 5624 DDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVA 5803
            DDMCALNNLP+ HDFDDLFEL+SLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQ+A
Sbjct: 1857 DDMCALNNLPICHDFDDLFELISLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQIA 1916

Query: 5804 IEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRD 5983
            IEEGKV+ECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKT+V+D
Sbjct: 1917 IEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTRVKD 1976

Query: 5984 LYIEQSSDEDI 6016
            L++EQSSDEDI
Sbjct: 1977 LFLEQSSDEDI 1987


>gb|AFA43530.1| replicase polyprotein [Citrus leaf blotch virus]
          Length = 1987

 Score = 3328 bits (8630), Expect = 0.0
 Identities = 1594/1991 (80%), Positives = 1770/1991 (88%), Gaps = 6/1991 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDA+YNAAAQTIISHSEFRNKHFAY+L SYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENHILFD+LP VV+TSKLIMCSIKESKVL+FKNIRD+K+  
Sbjct: 61   IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKNIRDRKKDN 120

Query: 419  -VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGS-ELFSNNFIKSISG 592
                   + +   DHTSF+NRL+A KDI RYTEEADAFFSS      ELFSNNFI+ IS 
Sbjct: 121  GALGFCGKDTSASDHTSFVNRLVAPKDIRRYTEEADAFFSSKKKNDPELFSNNFIRCISN 180

Query: 593  KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKG 772
            KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFT+VYPPELL+KFANSQNPK+YDFKVDKG
Sbjct: 181  KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTIVYPPELLKKFANSQNPKVYDFKVDKG 240

Query: 773  RLFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTD 952
            RLFFFPDGVKTEAYEQKLNMEWLFSASH KSGD TWTVTRHKSIY+HHLFEVS GEL++D
Sbjct: 241  RLFFFPDGVKTEAYEQKLNMEWLFSASHFKSGDQTWTVTRHKSIYSHHLFEVSMGELISD 300

Query: 953  SKLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII 1132
            SK+FFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII
Sbjct: 301  SKIFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII 360

Query: 1133 GDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKN 1312
            GDDVEIKEFLFFEQFCKRLIERQTSWGLFG+SFF+KLTD+ALS MPNVVARMFPQWKKKN
Sbjct: 361  GDDVEIKEFLFFEQFCKRLIERQTSWGLFGYSFFDKLTDLALSKMPNVVARMFPQWKKKN 420

Query: 1313 TFEFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDD 1492
            TFEFLFSLGTLVVEIERRVCFEH+LEEWGFEVV+TDENAYLDPLS+FA+NENFNEERVDD
Sbjct: 421  TFEFLFSLGTLVVEIERRVCFEHILEEWGFEVVITDENAYLDPLSVFALNENFNEERVDD 480

Query: 1493 GCLERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEF 1672
            G L+RV+LPFWN  DYD KR RANKYD+LC++  EER++  +  GPHKMLQIEWYGI+EF
Sbjct: 481  GYLDRVKLPFWNLKDYDPKRGRANKYDLLCYKFEEERKNDLRERGPHKMLQIEWYGIREF 540

Query: 1673 DDPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXS 1852
            DDPFI N IS+FT+ EAL+GK++ + +YS SKQADVL KCLSF+C               
Sbjct: 541  DDPFIANGISEFTILEALIGKRIHKERYSYSKQADVLAKCLSFVCEIGGGGEGLEFVLER 600

Query: 1853 RLQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHS 2032
            RLQ AG D IE E + L ++  +   E D A   L + +   +  FIPT SD +G   H 
Sbjct: 601  RLQSAGRDPIESESEGLGKKTAESSGEADAANT-LLETQISGLVAFIPTFSD-EGESQHR 658

Query: 2033 FDNDTCEQANVANNC---EGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPM 2203
             D +   +  +       EG ++   G E  +  FEID+ DIFRP++C NTHG EIPTPM
Sbjct: 659  ADLEVESEGEIGKEESFEEGTLSCAEGHEAIK--FEIDFSDIFRPHNCMNTHGYEIPTPM 716

Query: 2204 DGNCFFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFC 2383
            DGNCFFSAF   F+CPDS+DLR++FA+WL  FDGG++ ++G+KIRP+GV+MEAELIYLFC
Sbjct: 717  DGNCFFSAFAATFDCPDSKDLRSNFADWLDTFDGGSYADMGVKIRPNGVFMEAELIYLFC 776

Query: 2384 VFREVTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPC 2563
            ++REVTL++HDR+ + E VF IH GFEEGH+VQ+G+HFLGIETY ++    +P+LS+LPC
Sbjct: 777  IYREVTLIMHDRTNDRESVFAIHLGFEEGHMVQRGDHFLGIETYRIDGFASDPNLSELPC 836

Query: 2564 GYDERLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICD 2743
            GY E L  F F+PEHFNC+QFRGRKGAFLTKVDADYGHNGMVYPHN+WVPSLDEII+ICD
Sbjct: 837  GYSEELRNFHFKPEHFNCAQFRGRKGAFLTKVDADYGHNGMVYPHNAWVPSLDEIIRICD 896

Query: 2744 QGDEFNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTA 2923
             GD+FNCALINFY  +SSLGFH+DNE+VYNDDPILTVCTEGEG  SIE KE+T+SF+MTA
Sbjct: 897  HGDDFNCALINFYGPNSSLGFHRDNERVYNDDPILTVCTEGEGFFSIEFKEQTASFLMTA 956

Query: 2924 GSFFLMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNA 3103
            GSFFLMP+G+Q++ARHSVRN  PRVS+TFRKH+RRLDGSPIAIR+DNYRN+CLI ALS A
Sbjct: 957  GSFFLMPRGFQRKARHSVRNELPRVSITFRKHIRRLDGSPIAIRQDNYRNVCLIRALSKA 1016

Query: 3104 LNRDKQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEG 3283
            LNR  Q IIAKL++VN PFWSRFLSDGNGGS+EDC AACEALGI VDL+VDGKC+V+GEG
Sbjct: 1017 LNRGMQAIIAKLKTVNNPFWSRFLSDGNGGSVEDCLAACEALGITVDLFVDGKCLVLGEG 1076

Query: 3284 GLRISLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDICAGVNYIQFA 3463
             +R+SLAL++NHFS VE HRS+QRTFVSHLAKK NL V++GLD MLQ ++  GVN +QF 
Sbjct: 1077 AVRVSLALKDNHFSVVEEHRSIQRTFVSHLAKKSNLRVMDGLDEMLQSEMSTGVNCVQFI 1136

Query: 3464 ADYENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKS 3643
            AD+E+AR LANSFLNMTTGICL R LD GEKYF HM EERPKQIGFDVTAICGFAGSGKS
Sbjct: 1137 ADFEHARVLANSFLNMTTGICLSRALDNGEKYFLHMSEERPKQIGFDVTAICGFAGSGKS 1196

Query: 3644 RQLQSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLII 3823
            RQLQSWLH+RK+GNFCVVSPR NLAADWSFKLELEPNEKRKVATFESFIKMDK KLD+I+
Sbjct: 1197 RQLQSWLHARKRGNFCVVSPRNNLAADWSFKLELEPNEKRKVATFESFIKMDKSKLDMIV 1256

Query: 3824 LDELTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGG 4003
            LDELTLFPNGYLDLL+YEL +FN+HC +ILLFDPLQARYHN+MDE +L FEHD DRLIGG
Sbjct: 1257 LDELTLFPNGYLDLLIYELDKFNSHCHLILLFDPLQARYHNKMDEAVLNFEHDVDRLIGG 1316

Query: 4004 QDIQYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLL 4183
            QD++YIYSSHRMS++FNRFFDVPCFNQAETT EQ+LWI DD+YSI S+CID+ EPCDVLL
Sbjct: 1317 QDLRYIYSSHRMSKYFNRFFDVPCFNQAETTKEQRLWILDDVYSITSVCIDQGEPCDVLL 1376

Query: 4184 VESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFC 4363
            VESDLEKKAFSP+INVMTFGESQGLTFNHVCI            RWMVALTRAKTR+SFC
Sbjct: 1377 VESDLEKKAFSPVINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRAKTRLSFC 1436

Query: 4364 STFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERL 4543
            STFLGG+DEFK+++GESLVTSIL+ + ITF+RLNMMVKCNL++ EKKNGCSDEVDREERL
Sbjct: 1437 STFLGGMDEFKIKRGESLVTSILEGKQITFERLNMMVKCNLIKQEKKNGCSDEVDREERL 1496

Query: 4544 EGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQRE 4723
            EGDPFLKPFIFLGQRI+K            P CQTHLYITEPNFGLCYNFDFIREKEQRE
Sbjct: 1497 EGDPFLKPFIFLGQRIQKSHDEVGEIEVREPTCQTHLYITEPNFGLCYNFDFIREKEQRE 1556

Query: 4724 YRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREE 4903
            YRE+MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAV+KRLVFREE
Sbjct: 1557 YREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVKKRLVFREE 1616

Query: 4904 EENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSI 5083
            EENYQRLS+AHLVGGLLY+NFK K+GLEF+FDQ L EESVNAFEKKKLEKSCGTIKSHSI
Sbjct: 1617 EENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLFEESVNAFEKKKLEKSCGTIKSHSI 1676

Query: 5084 RSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRN 5263
            RSD+DWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLE QIRN
Sbjct: 1677 RSDVDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLEAQIRN 1736

Query: 5264 QLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFP 5443
            QLPEEIYIHSNKNFDDL +WVK FFQ+DICVESDYEAFD  QDEYILSFE+HLMKDAHFP
Sbjct: 1737 QLPEEIYIHSNKNFDDLYRWVKNFFQKDICVESDYEAFDVCQDEYILSFEIHLMKDAHFP 1796

Query: 5444 QKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAG 5623
            Q+VIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLAN+AFTLCRYEWRRGQPIAFAG
Sbjct: 1797 QRVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANIAFTLCRYEWRRGQPIAFAG 1856

Query: 5624 DDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVA 5803
            DDMCALNNLP+ HDFDDLFEL+SLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQ+A
Sbjct: 1857 DDMCALNNLPICHDFDDLFELISLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQIA 1916

Query: 5804 IEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRD 5983
            IEEGKV+ECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKT+V+D
Sbjct: 1917 IEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTRVKD 1976

Query: 5984 LYIEQSSDEDI 6016
            L++EQSSDEDI
Sbjct: 1977 LFLEQSSDEDI 1987


>gb|AFA43527.1| replicase polyprotein [Citrus leaf blotch virus]
          Length = 1987

 Score = 3326 bits (8623), Expect = 0.0
 Identities = 1593/1991 (80%), Positives = 1769/1991 (88%), Gaps = 6/1991 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDA+YNAAAQTIISHSEFRNKHFAY+L SYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENHILFD+LP VV+TSKLIMCSIKESKVL+FKNIRD+K+  
Sbjct: 61   IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKNIRDRKKDN 120

Query: 419  -VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGS-ELFSNNFIKSISG 592
                   + +   DHTSF+NRL+A KDI RYTEEADAFFSS      ELFSNNFI+ IS 
Sbjct: 121  GALGFCGKDTSASDHTSFVNRLVAPKDIRRYTEEADAFFSSKKKNDPELFSNNFIRCISN 180

Query: 593  KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKG 772
            KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFT+VYPPELL+KFANSQNPK+YDFKVDKG
Sbjct: 181  KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTIVYPPELLKKFANSQNPKVYDFKVDKG 240

Query: 773  RLFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTD 952
            RLFFFPDGVKTEAYEQKLNMEWLFSASH KSGD TWTVTRHKSIY+HHLFEVS GEL++D
Sbjct: 241  RLFFFPDGVKTEAYEQKLNMEWLFSASHFKSGDQTWTVTRHKSIYSHHLFEVSMGELISD 300

Query: 953  SKLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII 1132
            SK+FFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII
Sbjct: 301  SKIFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII 360

Query: 1133 GDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKN 1312
            GDDVEIKEFLFFEQFCKRLIERQTSWGLFG+SFF+KLTD+ALS MPNVVARMFPQWKKKN
Sbjct: 361  GDDVEIKEFLFFEQFCKRLIERQTSWGLFGYSFFDKLTDLALSKMPNVVARMFPQWKKKN 420

Query: 1313 TFEFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDD 1492
            TFEFLFSLGTLVVEIERRVCFEH+LEEWGFEVV+TDENAYLDPLS+FA+NENFNEERVDD
Sbjct: 421  TFEFLFSLGTLVVEIERRVCFEHILEEWGFEVVITDENAYLDPLSVFALNENFNEERVDD 480

Query: 1493 GCLERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEF 1672
            G L+RV+LPFWN  DYD KR RANKYD+LC++  EER++  +  GPHKMLQIEWYGI+EF
Sbjct: 481  GYLDRVKLPFWNLKDYDPKRGRANKYDLLCYKFEEERKNDLRERGPHKMLQIEWYGIREF 540

Query: 1673 DDPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXS 1852
            DDPFI N IS+FT+ EAL+GK++ + +YS SKQADVL KCLSF+C               
Sbjct: 541  DDPFIANGISEFTILEALIGKRIHKERYSYSKQADVLAKCLSFVCEIGGGGEGLEFVLER 600

Query: 1853 RLQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHS 2032
            RLQ AG D IE E + L ++  +   E D A   L + +   +  FIPT SD +G   H 
Sbjct: 601  RLQSAGRDPIESELEGLGKKTAESSGEADAANT-LLETQISGLVAFIPTFSD-EGESQHR 658

Query: 2033 FDNDTCEQANVANNC---EGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPM 2203
             D +   +  +       EG ++   G E  +  FEID+ DIFRP++C NTHG EIPTPM
Sbjct: 659  ADLEVESEGEIGKEESFEEGTLSCAEGHEAIK--FEIDFSDIFRPHNCMNTHGYEIPTPM 716

Query: 2204 DGNCFFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFC 2383
            DGNCFFSAF   F+CPDS+DLR++FA+WL  FDGG++ ++G+KIRP+GV+MEAELIYLFC
Sbjct: 717  DGNCFFSAFAATFDCPDSKDLRSNFADWLDTFDGGSYADMGVKIRPNGVFMEAELIYLFC 776

Query: 2384 VFREVTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPC 2563
            ++REVTL++HDR+ + E VF IH GFEEGH+VQ+G+HFLGIETY ++    +P+LS+LPC
Sbjct: 777  IYREVTLIMHDRTNDRESVFAIHLGFEEGHMVQRGDHFLGIETYRIDGFASDPNLSELPC 836

Query: 2564 GYDERLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICD 2743
            GY E L  F F+PEHFNC+QFRGRKGAFLTKVDADYGHNGMVYPHN+WVPSLDEII+ICD
Sbjct: 837  GYSEELRNFHFKPEHFNCAQFRGRKGAFLTKVDADYGHNGMVYPHNAWVPSLDEIIRICD 896

Query: 2744 QGDEFNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTA 2923
             GD+FNCALINFY  +SSLGFH+DNE+VYNDDPILTVCTEGEG  SIE KE+T+SF+MTA
Sbjct: 897  HGDDFNCALINFYGPNSSLGFHRDNERVYNDDPILTVCTEGEGFFSIEFKEQTASFLMTA 956

Query: 2924 GSFFLMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNA 3103
            GSFFLMP+G+Q++ARHSVRN  PRVS+TFRKH+RRLDGSPIAIR+DNYRN+CLI ALS A
Sbjct: 957  GSFFLMPRGFQRKARHSVRNELPRVSITFRKHIRRLDGSPIAIRQDNYRNVCLIRALSKA 1016

Query: 3104 LNRDKQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEG 3283
            LNR  Q IIAKL++VN PFWSRFLSDGNGGS+EDC AACEALGI VDL+VDGKC+V+GEG
Sbjct: 1017 LNRGMQAIIAKLKTVNNPFWSRFLSDGNGGSVEDCLAACEALGITVDLFVDGKCLVLGEG 1076

Query: 3284 GLRISLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDICAGVNYIQFA 3463
             +R+SLAL++NHFS VE HRS+QRTFVSHLAKK NL V++GLD MLQ ++  GVN +QF 
Sbjct: 1077 AVRVSLALKDNHFSVVEEHRSIQRTFVSHLAKKSNLRVMDGLDEMLQSEMSTGVNCVQFI 1136

Query: 3464 ADYENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKS 3643
            AD+E+AR LANSFLNMTTGICL R LD GEKYF HM EERPKQIGFDVTAICGFAGSGKS
Sbjct: 1137 ADFEHARVLANSFLNMTTGICLSRALDNGEKYFLHMSEERPKQIGFDVTAICGFAGSGKS 1196

Query: 3644 RQLQSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLII 3823
            RQLQSWLH+RK+GNFCVVSPR NLAADWSFKLELEPNEKRKVATFESFIKMDK KLD+I+
Sbjct: 1197 RQLQSWLHARKRGNFCVVSPRNNLAADWSFKLELEPNEKRKVATFESFIKMDKSKLDMIV 1256

Query: 3824 LDELTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGG 4003
            LDELTLFPNGYLDLL+YEL +FN+HC +ILLFDPLQARYHN+MDE +L FEHD DRLIGG
Sbjct: 1257 LDELTLFPNGYLDLLIYELDKFNSHCHLILLFDPLQARYHNKMDEAVLNFEHDVDRLIGG 1316

Query: 4004 QDIQYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLL 4183
            QD++YIYSSHRMS++FNRFFDVPCFNQAETT EQ+LWI DD+YSI S+CID+ EPCDVLL
Sbjct: 1317 QDLRYIYSSHRMSKYFNRFFDVPCFNQAETTKEQRLWILDDVYSITSVCIDQGEPCDVLL 1376

Query: 4184 VESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFC 4363
            VESDLEKKAFSP+INVMTFGESQGLTFNHVCI            RWMVALTRAKTR+SFC
Sbjct: 1377 VESDLEKKAFSPVINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRAKTRLSFC 1436

Query: 4364 STFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERL 4543
            STFLGG+DEFK+++GESLVTSIL+ + ITF+R NMMVKCNL++ EKKNGCSDEVDREERL
Sbjct: 1437 STFLGGMDEFKIKRGESLVTSILEGKQITFERSNMMVKCNLIKQEKKNGCSDEVDREERL 1496

Query: 4544 EGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQRE 4723
            EGDPFLKPFIFLG RI+K            P CQTHLYITEPNFGLCYNFDFIREKEQRE
Sbjct: 1497 EGDPFLKPFIFLGHRIQKSHDEVGEIEVREPTCQTHLYITEPNFGLCYNFDFIREKEQRE 1556

Query: 4724 YRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREE 4903
            YRE+MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAV+KRLVFREE
Sbjct: 1557 YREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVKKRLVFREE 1616

Query: 4904 EENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSI 5083
            EENYQRLS+AHLVGGLLY+NFK K+GLEF+FDQ L EESVNAFEKKKLEKSCGTIKSHSI
Sbjct: 1617 EENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLFEESVNAFEKKKLEKSCGTIKSHSI 1676

Query: 5084 RSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRN 5263
            RSD+DWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLE QIRN
Sbjct: 1677 RSDVDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLEAQIRN 1736

Query: 5264 QLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFP 5443
            QLPEEIYIHSNKNFDDLN+WVK FFQ+DICVESDYEAFD  QDEYILSFE+HLMKDAHFP
Sbjct: 1737 QLPEEIYIHSNKNFDDLNRWVKNFFQKDICVESDYEAFDVCQDEYILSFEIHLMKDAHFP 1796

Query: 5444 QKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAG 5623
            Q+VIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLAN+AFTLCRYEWRRGQPIAFAG
Sbjct: 1797 QRVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANIAFTLCRYEWRRGQPIAFAG 1856

Query: 5624 DDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVA 5803
            DDMCALNNLP+ HDFDDLFEL+SLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQ+A
Sbjct: 1857 DDMCALNNLPICHDFDDLFELISLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQIA 1916

Query: 5804 IEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRD 5983
            IEEGKV+ECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKT+V+D
Sbjct: 1917 IEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTRVKD 1976

Query: 5984 LYIEQSSDEDI 6016
            L++EQSSDEDI
Sbjct: 1977 LFLEQSSDEDI 1987


>gb|AFA43536.1| replicase polyprotein [Citrus leaf blotch virus]
          Length = 1987

 Score = 3323 bits (8615), Expect = 0.0
 Identities = 1592/1991 (79%), Positives = 1768/1991 (88%), Gaps = 6/1991 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDA+YNAAAQTIISHSEFRNKHFAY+L SYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAVYNAAAQTIISHSEFRNKHFAYALTSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENHILFD+LP VV+TSKLIMCSIKESKVL+FKNIRD+K+  
Sbjct: 61   IELYPNGYMPHSHPLSKIFENHILFDVLPDVVSTSKLIMCSIKESKVLIFKNIRDRKKDN 120

Query: 419  -VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGS-ELFSNNFIKSISG 592
                   + +   DHTSF+NRL+A KDI RYTEEADAFFSS      ELFSNNFI+ IS 
Sbjct: 121  GALGFCGKDTSASDHTSFVNRLVAPKDIRRYTEEADAFFSSKKKNDPELFSNNFIRCISN 180

Query: 593  KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKG 772
            KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFT+VYPPELL+KFANSQNPK+YDFKVDKG
Sbjct: 181  KEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTIVYPPELLKKFANSQNPKVYDFKVDKG 240

Query: 773  RLFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTD 952
            RLFFFPDGVKTEAYEQKLNMEWLFSASH KSGD TWTVTRHKSIY+HHLFEVS GEL++D
Sbjct: 241  RLFFFPDGVKTEAYEQKLNMEWLFSASHFKSGDQTWTVTRHKSIYSHHLFEVSMGELISD 300

Query: 953  SKLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII 1132
            SK+FFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII
Sbjct: 301  SKIFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQII 360

Query: 1133 GDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKN 1312
            GDDVEIKEFLFFEQFCKRLIERQTSWGLFG+SFF+KLTD+ALS MPNVVARMFPQWKKKN
Sbjct: 361  GDDVEIKEFLFFEQFCKRLIERQTSWGLFGYSFFDKLTDLALSKMPNVVARMFPQWKKKN 420

Query: 1313 TFEFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDD 1492
            TFEFLFSLGTLVVEIERRVCFEH+LEEWGFEVV+TDENAYLDPLS+FA+NENFNEERVDD
Sbjct: 421  TFEFLFSLGTLVVEIERRVCFEHILEEWGFEVVITDENAYLDPLSVFALNENFNEERVDD 480

Query: 1493 GCLERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEF 1672
            G L+RV+LPFWN  DYD KR RANKYD+LC++  EER++  +  GPHKMLQIEWYGI+EF
Sbjct: 481  GYLDRVKLPFWNLKDYDPKRGRANKYDLLCYKFEEERKNDLRERGPHKMLQIEWYGIREF 540

Query: 1673 DDPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXS 1852
            DDPFI N IS+FT+ EAL+GK++ + +YS SKQADVL KCLSF+C               
Sbjct: 541  DDPFIANGISEFTILEALIGKRIHKERYSYSKQADVLAKCLSFVCEIGGGGEGLEFVLER 600

Query: 1853 RLQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHS 2032
            RLQ AG D IE E + L ++  +   E D A   L + +   +  FIPT SD +G   H 
Sbjct: 601  RLQSAGRDPIESELEGLGKKTAESSGEADAANT-LLETQISGLVAFIPTFSD-EGESQHR 658

Query: 2033 FDNDTCEQANVANNC---EGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPM 2203
             D +   +  +       EG ++   G E  +  FEID+ DIFRP++C NTHG EIPTPM
Sbjct: 659  ADLEVESEGEIGKEESFEEGTLSCAEGHEAIK--FEIDFSDIFRPHNCMNTHGYEIPTPM 716

Query: 2204 DGNCFFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFC 2383
            DGNCFFSAF   F+CPDS+DLR++FA+WL  FDGG++ ++G+KIRP+GV+MEAELIYLFC
Sbjct: 717  DGNCFFSAFAATFDCPDSKDLRSNFADWLDTFDGGSYADMGVKIRPNGVFMEAELIYLFC 776

Query: 2384 VFREVTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPC 2563
            ++REVTL++HDR+ + E VF IH GFEEGH+VQ+G+HFLGIETY ++    +P+LS+LPC
Sbjct: 777  IYREVTLIMHDRTNDRESVFAIHLGFEEGHMVQRGDHFLGIETYRIDGFASDPNLSELPC 836

Query: 2564 GYDERLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICD 2743
            GY E L  F F+PEHFNC+QFRGRKGAFLTKVDADYGHNGMVYPHN+WVPSLDEII+ICD
Sbjct: 837  GYSEELRNFHFKPEHFNCAQFRGRKGAFLTKVDADYGHNGMVYPHNAWVPSLDEIIRICD 896

Query: 2744 QGDEFNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTA 2923
             GD+FNCALINFY  +SSLGFH+DNE+VYNDDPILTVCTEGEG  SIE KE+T+SF+MTA
Sbjct: 897  HGDDFNCALINFYGPNSSLGFHRDNERVYNDDPILTVCTEGEGFFSIEFKEQTASFLMTA 956

Query: 2924 GSFFLMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNA 3103
            GSFFLMP+G+Q++ARHSVRN  PRVS+TFRKH+RRLDGSPIAIR+DNYRN+CLI ALS A
Sbjct: 957  GSFFLMPRGFQRKARHSVRNELPRVSITFRKHIRRLDGSPIAIRQDNYRNVCLIRALSKA 1016

Query: 3104 LNRDKQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEG 3283
            LNR  Q IIAKL++VN PFWSRFLSDGNGGS+EDC AACEALGI VDL+VDGKC+V+GEG
Sbjct: 1017 LNRGMQAIIAKLKTVNNPFWSRFLSDGNGGSVEDCLAACEALGITVDLFVDGKCLVLGEG 1076

Query: 3284 GLRISLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDICAGVNYIQFA 3463
             +R+SLAL++NHFS VE HRS+QRTFVSHLAKK NL V++GLD MLQ ++  GVN +QF 
Sbjct: 1077 AVRVSLALKDNHFSVVEEHRSIQRTFVSHLAKKSNLRVMDGLDEMLQSEMSTGVNCVQFI 1136

Query: 3464 ADYENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKS 3643
            AD+E+AR LANSFLNMTTGICL R LD GEKYF HM EERPKQIGFDVTAICGFAGSGKS
Sbjct: 1137 ADFEHARVLANSFLNMTTGICLSRALDNGEKYFLHMSEERPKQIGFDVTAICGFAGSGKS 1196

Query: 3644 RQLQSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLII 3823
            RQLQSWLH+RK+GNFCVVSPR NLAADWSFKLELEPNEKRKVATFESFIKMDK KLD+I+
Sbjct: 1197 RQLQSWLHARKRGNFCVVSPRNNLAADWSFKLELEPNEKRKVATFESFIKMDKSKLDMIV 1256

Query: 3824 LDELTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGG 4003
            LDELTLFPNGYLDLL+YEL +FN+HC +ILLFDPLQARYHN+MDE +L FEHD DRLIGG
Sbjct: 1257 LDELTLFPNGYLDLLIYELDKFNSHCHLILLFDPLQARYHNKMDEAVLNFEHDVDRLIGG 1316

Query: 4004 QDIQYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLL 4183
            QD++YIYSSHRMS++FNRFFDVPCFNQAETT EQ+LWI DD+YSI S+CID+ EPCDVLL
Sbjct: 1317 QDLRYIYSSHRMSKYFNRFFDVPCFNQAETTKEQRLWILDDVYSITSVCIDQGEPCDVLL 1376

Query: 4184 VESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFC 4363
            VESDLEKKAFSP+INVMTFGESQGLTFNHVCI            RWMVALTRAKTR+SFC
Sbjct: 1377 VESDLEKKAFSPVINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRAKTRLSFC 1436

Query: 4364 STFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERL 4543
            STFLGG+DEFK+++GESLVTSIL+ + ITF+R NMMVKCNL++ EKKNGCSDEVDREERL
Sbjct: 1437 STFLGGMDEFKIKRGESLVTSILEGKQITFERSNMMVKCNLIKQEKKNGCSDEVDREERL 1496

Query: 4544 EGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQRE 4723
            EGDPFLKPFIFLG RI+K            P CQTHLYITEPNFGLCYNFDFIREKEQRE
Sbjct: 1497 EGDPFLKPFIFLGHRIQKSHDEVGEIEVREPTCQTHLYITEPNFGLCYNFDFIREKEQRE 1556

Query: 4724 YRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREE 4903
            YRE+MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAV+KRLVFREE
Sbjct: 1557 YREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVKKRLVFREE 1616

Query: 4904 EENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSI 5083
            EENYQRLS+AHLVGGLLY+NFK K+GLEF+FDQ L EESVNAFEKKKLEKSCGTIKSHSI
Sbjct: 1617 EENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLFEESVNAFEKKKLEKSCGTIKSHSI 1676

Query: 5084 RSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRN 5263
            RSD+DWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLE QIRN
Sbjct: 1677 RSDVDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLEAQIRN 1736

Query: 5264 QLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFP 5443
            QLPEEIYIHSNKNFDDL +WVK FFQ+DICVESDYEAFD  QDEYILSFE+HLMKDAHFP
Sbjct: 1737 QLPEEIYIHSNKNFDDLYRWVKNFFQKDICVESDYEAFDVCQDEYILSFEIHLMKDAHFP 1796

Query: 5444 QKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAG 5623
            Q+VIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLAN+AFTLCRYEWRRGQPIAFAG
Sbjct: 1797 QRVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANIAFTLCRYEWRRGQPIAFAG 1856

Query: 5624 DDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVA 5803
            DDMCALNNLP+ HDFDDLFEL+SLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQ+A
Sbjct: 1857 DDMCALNNLPICHDFDDLFELISLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQIA 1916

Query: 5804 IEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRD 5983
            IEEGKV+ECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKT+V+D
Sbjct: 1917 IEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTRVKD 1976

Query: 5984 LYIEQSSDEDI 6016
            L++EQSSDEDI
Sbjct: 1977 LFLEQSSDEDI 1987


>ref|NP_624333.1| replicase polyprotein [Citrus leaf blotch virus]
 sp|Q91QZ3.1|RDRP_CLBVS RecName: Full=RNA replication polyprotein; AltName: Full=ORF1
            protein; Includes: RecName: Full=Viral methyltransferase;
            Includes: RecName: Full=Putative Fe(2+) 2-oxoglutarate
            dioxygenase; Includes: RecName: Full=Protease; Includes:
            RecName: Full=RNA-directed RNA polymerase; Includes:
            RecName: Full=Helicase
 emb|CAC39422.1| hypothetical protein [Citrus leaf blotch virus]
          Length = 1962

 Score = 3207 bits (8315), Expect = 0.0
 Identities = 1555/1988 (78%), Positives = 1730/1988 (87%), Gaps = 3/1988 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDAIYNAAAQTI+SHSEFRNKHFAYSLNSYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENH+LFD+LP VVNTS+L+MCSIKESKVLVFK IRDK RR 
Sbjct: 61   IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120

Query: 419  VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNFIKSISGKE 598
            V +L   +SL   HTSFINRL+ASKD+SRYTEEADAFF S     ELFS NFIKS+  KE
Sbjct: 121  VSDLNALNSLNNSHTSFINRLVASKDVSRYTEEADAFFQSKKGSPELFSRNFIKSLENKE 180

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGRL 778
            AVFFHDEVHHWTKAQMFSFLK TKV+RFIFTVVYPPE+L+KFANSQNPK+YDFKVDKGRL
Sbjct: 181  AVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKGRL 240

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
            FFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKSIYAHHLFE+S GELVTDSK
Sbjct: 241  FFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTDSK 300

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
            LFFSDY SIDMSKIFLDRFRSYEVFPI+IEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD
Sbjct: 301  LFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 360

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FPQWKKKNTF
Sbjct: 361  DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKNTF 420

Query: 1319 EFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDDGC 1498
            EFLFSLGTLVV++ER+VCFEHVLEEWGFEVV+TDENAYLDPLSIFAINENFNE+RVDDG 
Sbjct: 421  EFLFSLGTLVVDVERKVCFEHVLEEWGFEVVITDENAYLDPLSIFAINENFNEDRVDDGY 480

Query: 1499 LERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEFD- 1675
            LER+RLPFWN +DYDLKR+R N Y+IL ++  EER+  S   GP+KMLQIEWYGIKEF  
Sbjct: 481  LERIRLPFWNLNDYDLKRKRVNAYNILSYRFEEERKIESAQKGPNKMLQIEWYGIKEFKV 540

Query: 1676 DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXSR 1855
            DPFI N+I++FTL EAL+GK++D +KYS SKQA  L   L+F+C               R
Sbjct: 541  DPFISNSITEFTLLEALLGKRIDPKKYSYSKQACTLSNYLTFLCAEGLDGFNLEEHLERR 600

Query: 1856 LQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHSF 2035
            L+ AGHD  +DE                  E+EL+ A+    A  I  L+D  G M    
Sbjct: 601  LKAAGHDVSDDE------------------EEELTSAEQ---AGPIKILADPLGFM---- 635

Query: 2036 DNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPMDGNC 2215
              +  E+  +          +F  +     FEI+Y DIF P++C NTHG EIPTP DGNC
Sbjct: 636  -KECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSDGNC 694

Query: 2216 FFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFCVFRE 2395
            FFSAF   FE    + LR+DF++WL  F+GG++  L   IRP+GV+MEAELIYLFCVFR 
Sbjct: 695  FFSAFTETFEVERPDTLRSDFSDWLMEFNGGSYASLAEMIRPNGVFMEAELIYLFCVFRG 754

Query: 2396 VTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPCGYDE 2575
            VTL++HDR+ E E V+ +H GFEEGH+V +G HF+GIETY ++T   +P L D+PCG+ E
Sbjct: 755  VTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLGDIPCGFSE 814

Query: 2576 RLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICDQGDE 2755
             +TKF FRP+HFNC+QFRGRK AF+TKVDADYGHNGMVYPHNSWVPSL+EII+IC QGD+
Sbjct: 815  EITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLEEIIQICGQGDD 874

Query: 2756 FNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFF 2935
            FNCALINFY+++SSLGFH+DNE+VYNDDPILTVCT GEG  +IE K++ +SF+MTAGSFF
Sbjct: 875  FNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGRFTIEFKDQVTSFLMTAGSFF 934

Query: 2936 LMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRD 3115
            LMPKG+QK+ARHSV N   RVS+TFRKHVRRL+GSPIAIR++NY+N CLI+A S A+ R 
Sbjct: 935  LMPKGFQKKARHSVSNEMSRVSITFRKHVRRLNGSPIAIREENYKNTCLINAFSKAMKRS 994

Query: 3116 KQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRI 3295
            KQ IIAKL++VN PFWSR+LS+GNGGSIEDCQ+ACEAL + VDL V+GKC+V+G+G LRI
Sbjct: 995  KQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKCVVLGKGALRI 1054

Query: 3296 SLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI-CAGVNYIQFAADY 3472
            S+AL+NNHFS +   + M+RTFVSHL +KGN+NVLEG DAML  D+  AGVN IQFAA++
Sbjct: 1055 SMALRNNHFSVINAAQLMERTFVSHLLEKGNVNVLEGFDAMLSGDVGAAGVNKIQFAANF 1114

Query: 3473 ENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKSRQL 3652
            E AR LANSFLNMTTGICLG+ LD GEKYF H+L++R KQIG DVT +CGFAGSGKSR+L
Sbjct: 1115 EFARILANSFLNMTTGICLGKALDNGEKYFLHILKDRVKQIGIDVTMVCGFAGSGKSRKL 1174

Query: 3653 QSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDE 3832
            QSWLHSRKKGNFCVVSPR NLAADW+FKLELEPNE+RKV+TFE FIK DK KLDLI++DE
Sbjct: 1175 QSWLHSRKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSKLDLIVIDE 1234

Query: 3833 LTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDI 4012
            LTLFPNGYLDLLVYEL + N HC++ILLFDPLQARYHN+MDE IL FEHD DRLIGGQ+I
Sbjct: 1235 LTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVDRLIGGQNI 1294

Query: 4013 QYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVES 4192
            +YIYS+HRMSR+FNRFFDVPCFNQA+ T EQ+LWIFDD+YSI SIC DR EPCDVLLVES
Sbjct: 1295 EYIYSTHRMSRYFNRFFDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQEPCDVLLVES 1354

Query: 4193 DLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTF 4372
            DLEKKAFSPIINVMTFGESQGLTFNHVCI            RWMVALTRA+TR S CSTF
Sbjct: 1355 DLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRARTRFSLCSTF 1414

Query: 4373 LGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERLEGD 4552
            LGGI+EFKV++ ESL+TSILQ E ITF+RLN+M+KCNL+R EK+NGC DEVDREERLEGD
Sbjct: 1415 LGGIEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRREKENGCRDEVDREERLEGD 1474

Query: 4553 PFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRE 4732
            PFLKPFIFLGQR++K            P CQTHLYITEPNFGLCYNFDFIREKEQREYRE
Sbjct: 1475 PFLKPFIFLGQRVEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDFIREKEQREYRE 1534

Query: 4733 NMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 4912
            +MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN
Sbjct: 1535 DMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 1594

Query: 4913 YQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSD 5092
            YQRLS+AHLVGGLLY NFK+KMGLEF+FDQ LLEES+NAFEKKKLEKSCGTIKSHSIRSD
Sbjct: 1595 YQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSCGTIKSHSIRSD 1654

Query: 5093 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 5272
            IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP
Sbjct: 1655 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 1714

Query: 5273 EEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKV 5452
            EEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFE+HLMKDAHFPQK+
Sbjct: 1715 EEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEIHLMKDAHFPQKI 1774

Query: 5453 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDM 5632
            IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRGQPIAFAGDDM
Sbjct: 1775 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPIAFAGDDM 1834

Query: 5633 CALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 5812
            CALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPELVYNRFQVAIEE
Sbjct: 1835 CALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 1894

Query: 5813 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYI 5992
            GKVLECLENYAIEVSYAYSLSERLYEVLKSERQ+QYHQAVVRFIVTHIDKLKTKVRDL++
Sbjct: 1895 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHIDKLKTKVRDLFL 1954

Query: 5993 EQSSDEDI 6016
            EQSSDEDI
Sbjct: 1955 EQSSDEDI 1962


>gb|AUY61794.1| putative replicase polyprotein [Citrus leaf blotch virus]
          Length = 1962

 Score = 3205 bits (8310), Expect = 0.0
 Identities = 1553/1988 (78%), Positives = 1726/1988 (86%), Gaps = 3/1988 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDAIYNAAAQTI+SHSEFRNKHFAYSLNSYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENH+LFD+LP VVNTS+L+MCSIKESKVLVFK IRDK RR 
Sbjct: 61   IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120

Query: 419  VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNFIKSISGKE 598
            V +L   +SL   HTSFINRL+ASKD+SRYTEEADAFF S     ELFS NFIKS+  KE
Sbjct: 121  VSDLNAFNSLNNSHTSFINRLVASKDVSRYTEEADAFFQSKKGSPELFSKNFIKSLENKE 180

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGRL 778
            AVFFHDEVHHWTKAQMFSFLK TKV+RFIFTVVYPPE+L+KFANSQNPK+YDFKVDKGRL
Sbjct: 181  AVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKGRL 240

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
            FFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKSIYAHHLFE+S GELVTDSK
Sbjct: 241  FFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTDSK 300

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
            LFFSDY SIDMSKIFLDRFRSYEVFPI+IEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD
Sbjct: 301  LFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 360

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FPQWKKKNTF
Sbjct: 361  DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKNTF 420

Query: 1319 EFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDDGC 1498
            EFLFSLGTLVV++ER+VCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNE+RVDDG 
Sbjct: 421  EFLFSLGTLVVDVERKVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEDRVDDGY 480

Query: 1499 LERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEFD- 1675
            LER+RLPFWN +DYDLKR+R N YDIL ++  EER+  S   GP+KMLQIEWYGIKEF  
Sbjct: 481  LERIRLPFWNLNDYDLKRKRVNAYDILSYRFEEERKIESAQKGPNKMLQIEWYGIKEFQV 540

Query: 1676 DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXSR 1855
            DPFI N+I++FTL E L+GK++D +KYS SKQA  L   L+F+C               R
Sbjct: 541  DPFISNSITEFTLLEVLLGKRIDPKKYSYSKQACTLSNYLTFLCAEGLDGFNLEEHLERR 600

Query: 1856 LQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHSF 2035
            L+ AGHD  +DE                  E+EL+ A+    A  I  L+D  G M    
Sbjct: 601  LKAAGHDISDDE------------------EEELTSAEQ---AGPIKILADPLGFM---- 635

Query: 2036 DNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPMDGNC 2215
              +  E+  +          +F  +     FEI+Y DIF P++C NTHG EIPTP DGNC
Sbjct: 636  -KECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSDGNC 694

Query: 2216 FFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFCVFRE 2395
            FFSAF   FE    + LR+DF++WL  F+GG++  L   IRPDGV+MEAELIYLFCVFR 
Sbjct: 695  FFSAFAETFEVERPDTLRSDFSDWLMEFNGGSYASLAEMIRPDGVFMEAELIYLFCVFRG 754

Query: 2396 VTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPCGYDE 2575
            VTL++HDR+ E E V+ +H GFEEGH+V +G HF+GIETY ++T   +P L D+PCG+ E
Sbjct: 755  VTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLDDIPCGFSE 814

Query: 2576 RLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICDQGDE 2755
             +TKF FRP+HFNC+QFRGRK AF+TKVDADYGHNGMVYPHNSWVPSLDEII+IC QGD+
Sbjct: 815  EITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLDEIIQICGQGDD 874

Query: 2756 FNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFF 2935
            FNCALINFY+++SSLGFH+D+E+VYNDDPILTVCT GEG  +IE K++ +SF+MTAGSFF
Sbjct: 875  FNCALINFYEANSSLGFHRDSERVYNDDPILTVCTFGEGTFTIEFKDQVTSFLMTAGSFF 934

Query: 2936 LMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRD 3115
            LMPKG+QK+ARHSV N   RVS+TFRKHVRRL+GSPIAIR++NY+N CLI A S A+ R 
Sbjct: 935  LMPKGFQKKARHSVSNEMSRVSITFRKHVRRLNGSPIAIREENYKNTCLIDAFSKAMKRS 994

Query: 3116 KQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRI 3295
            KQ IIAKL++VN PFWSR+LS+GNGGSIEDCQ+ACEAL + VDL V+GKC+V+G+G  RI
Sbjct: 995  KQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKCVVLGKGAFRI 1054

Query: 3296 SLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI-CAGVNYIQFAADY 3472
            S+AL+NNHFS +   + M+RTFVSHL +KGN+NVLEGLD ML  D+  AGVN IQFAA++
Sbjct: 1055 SMALKNNHFSVINAAQLMERTFVSHLLEKGNVNVLEGLDEMLSGDVGAAGVNKIQFAANF 1114

Query: 3473 ENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKSRQL 3652
            E AR LANSFLNMTTGICLG+ LD GEKYF H+L++R KQIG DVT +CGFAGSGKSR+L
Sbjct: 1115 EFARILANSFLNMTTGICLGKALDNGEKYFLHILKDRAKQIGIDVTMVCGFAGSGKSRKL 1174

Query: 3653 QSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDE 3832
            QSWLHSRKKGNFCV+SPR NLAADW+FKLELEPNE+RKV+TFE FIK DK KLDLI++DE
Sbjct: 1175 QSWLHSRKKGNFCVISPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSKLDLIVIDE 1234

Query: 3833 LTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDI 4012
            LTLFPNGYLDLLVYEL + N HC++ILLFDPLQARYHN+MDE IL FEHD DRLIGGQ I
Sbjct: 1235 LTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVDRLIGGQSI 1294

Query: 4013 QYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVES 4192
            +YIYS+HRMSR+FNRFFDVPCFNQA+ T EQ+LWIFDD+YSI SIC DR EPCDVLLVES
Sbjct: 1295 EYIYSTHRMSRYFNRFFDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQEPCDVLLVES 1354

Query: 4193 DLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTF 4372
            DLEKKAFSPI+NVMTFGESQGLTFNHVCI            RWMVALTR++TR S CSTF
Sbjct: 1355 DLEKKAFSPIMNVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRSRTRFSLCSTF 1414

Query: 4373 LGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERLEGD 4552
            LGG++EFKV++ ESL+TSILQ E ITF+RLN+M+KCNL+R EK+NGC DEVDREERLEGD
Sbjct: 1415 LGGVEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRREKENGCRDEVDREERLEGD 1474

Query: 4553 PFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRE 4732
            PFLKPFIFLGQR++K            P CQTHLYITEPNFGLCYNFDFIREKEQREYRE
Sbjct: 1475 PFLKPFIFLGQRVEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDFIREKEQREYRE 1534

Query: 4733 NMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 4912
            +MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN
Sbjct: 1535 DMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 1594

Query: 4913 YQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSD 5092
            YQRLS+AHLVGGLLY NFK+KMGLEF+FDQ LLEES+NAFEKKKLEKSCGTIKSHSIRSD
Sbjct: 1595 YQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSCGTIKSHSIRSD 1654

Query: 5093 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 5272
            IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP
Sbjct: 1655 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 1714

Query: 5273 EEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKV 5452
            EEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQK+
Sbjct: 1715 EEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKI 1774

Query: 5453 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDM 5632
            IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRGQPIAFAGDDM
Sbjct: 1775 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPIAFAGDDM 1834

Query: 5633 CALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 5812
            CALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPELVYNRFQVAIEE
Sbjct: 1835 CALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 1894

Query: 5813 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYI 5992
            GKVLECLENYAIEVSYAYSLSERLYEVLKSERQ+QYHQAVVRFIVTHIDKLKTKVRDL++
Sbjct: 1895 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHIDKLKTKVRDLFL 1954

Query: 5993 EQSSDEDI 6016
            EQSSDEDI
Sbjct: 1955 EQSSDEDI 1962


>gb|AUY61797.1| putative replicase polyprotein [Citrus leaf blotch virus]
          Length = 1962

 Score = 3204 bits (8308), Expect = 0.0
 Identities = 1552/1988 (78%), Positives = 1727/1988 (86%), Gaps = 3/1988 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDAIYNAAAQTI+SHSEFRNKHFAYSLNSYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENH+LFD+LP VVNTS+L+MCSIKESKVLVFK IRDK RR 
Sbjct: 61   IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120

Query: 419  VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNFIKSISGKE 598
            V +L   +SL   HTSFINRL+ASKD+SRYTEEADAFF S     ELFS NFIKS+  KE
Sbjct: 121  VSDLNALNSLNNSHTSFINRLVASKDVSRYTEEADAFFQSKKGSPELFSRNFIKSLENKE 180

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGRL 778
            AVFFHDEVHHWTKAQMFSFLK TKV+RFIFTVVYPPE+L+KFANSQNPK+YDFKVDKGRL
Sbjct: 181  AVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKGRL 240

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
            FFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKSIYAHHLFE+S GELVTDSK
Sbjct: 241  FFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTDSK 300

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
            LFFSDY SIDMSKIFLDRFRSYEVFPI+IEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD
Sbjct: 301  LFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 360

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FPQWKKKNTF
Sbjct: 361  DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKNTF 420

Query: 1319 EFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDDGC 1498
            EFLFSLGTLVV++ER+VCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNE+RVDDG 
Sbjct: 421  EFLFSLGTLVVDVERKVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEDRVDDGY 480

Query: 1499 LERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEFD- 1675
            LER+RLPFWN +DYDLKR+R N YDIL ++  EER+  S   GP+KMLQIEWYGIKEF  
Sbjct: 481  LERIRLPFWNLNDYDLKRKRVNAYDILSYRFEEERKIESAQKGPNKMLQIEWYGIKEFQV 540

Query: 1676 DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXSR 1855
            DPFI N+I++FTL EAL+GK++D +KYS SKQA  L   L+F+C               R
Sbjct: 541  DPFISNSITEFTLLEALLGKRIDPKKYSYSKQACTLSNYLTFLCAEGLDGFNLEEHLERR 600

Query: 1856 LQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHSF 2035
            L+ AGHD  +DE                  E+EL+ A+    A  I  L+D  G M    
Sbjct: 601  LKAAGHDISDDE------------------EEELTSAEQ---AGPIKILADPLGFM---- 635

Query: 2036 DNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPMDGNC 2215
              +  E+  +          +F  +     FEI+Y DIF P++C NTHG EIPTP DGNC
Sbjct: 636  -KECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSDGNC 694

Query: 2216 FFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFCVFRE 2395
            FFSAF   FE    + LR+DF++WL  F+GG++  L   IRPDGV+MEAELIYLFCVFR 
Sbjct: 695  FFSAFTETFEVERPDTLRSDFSDWLMEFNGGSYASLAEMIRPDGVFMEAELIYLFCVFRG 754

Query: 2396 VTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPCGYDE 2575
            VTL++HDR+ E E V+ +H GFEEGH+V +G HF+GIETY ++T   +P L D+PCG+ E
Sbjct: 755  VTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLDDIPCGFSE 814

Query: 2576 RLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICDQGDE 2755
             +TKF FRP+HFNC+QFRGRK AF+TKVDADYGHNGMVYPHNSWVPSLDEII+IC QGD+
Sbjct: 815  EITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLDEIIQICGQGDD 874

Query: 2756 FNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFF 2935
            FNCALINFY+++SSLGFH+D+E+VYNDDPILTVCT GEG  +IE K++ +SF+MTAGSFF
Sbjct: 875  FNCALINFYEANSSLGFHRDSERVYNDDPILTVCTFGEGTFTIEFKDQVTSFLMTAGSFF 934

Query: 2936 LMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRD 3115
            LMPKG+QK+ARHSV N   RVS+TFRKHVRRL+GSPIAIR++NY+N CLI A S A+ R 
Sbjct: 935  LMPKGFQKKARHSVSNEMSRVSITFRKHVRRLNGSPIAIREENYKNTCLIDAFSKAMKRS 994

Query: 3116 KQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRI 3295
            KQ IIA+L++VN PFWSR+LS+GNGGSIEDCQ+ACEAL + VDL V+GKC+V+G+G  RI
Sbjct: 995  KQAIIARLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKCVVLGKGAFRI 1054

Query: 3296 SLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI-CAGVNYIQFAADY 3472
            S+AL+NNHFS +   + M+RTFVSHL +KGN+NVLEGLD ML  D+  AGVN IQFAA++
Sbjct: 1055 SMALKNNHFSVINAAQLMERTFVSHLLEKGNVNVLEGLDEMLSGDVGAAGVNKIQFAANF 1114

Query: 3473 ENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKSRQL 3652
            E AR LANSFLNMTTGICLG+ LD GEKYF H+L++R KQIG DVT +CGFAGSGKSR+L
Sbjct: 1115 EFARILANSFLNMTTGICLGKALDNGEKYFLHILKDRVKQIGIDVTMVCGFAGSGKSRKL 1174

Query: 3653 QSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDE 3832
            QSWLHS+KKGNFCVVSPR NLAADW+FKLELEPNE+RKV+TFE FIK DK KLDLI++DE
Sbjct: 1175 QSWLHSKKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSKLDLIVIDE 1234

Query: 3833 LTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDI 4012
            LTLFPNGYLDLLVYEL + N HC++ILLFDPLQARYHN+MDE IL FEHD DRL+GGQ I
Sbjct: 1235 LTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVDRLVGGQSI 1294

Query: 4013 QYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVES 4192
            +YIYS+HRMSR+FNRFFDVPCFNQA+ T EQKLWIFDD+YSI SIC DR EPCDVLLVES
Sbjct: 1295 EYIYSTHRMSRYFNRFFDVPCFNQADRTEEQKLWIFDDVYSIPSICSDRQEPCDVLLVES 1354

Query: 4193 DLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTF 4372
            DLEKKAFSPI+NVMTFGESQGLTFNHVCI            RWMVALTR++TR S CSTF
Sbjct: 1355 DLEKKAFSPIMNVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRSRTRFSLCSTF 1414

Query: 4373 LGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERLEGD 4552
            LGG++EFKV++ ESL+TSILQ E ITFDRLN+M+KCNL+R EK+NGC DEVDREERLEGD
Sbjct: 1415 LGGVEEFKVKRKESLITSILQGEKITFDRLNLMLKCNLIRREKENGCRDEVDREERLEGD 1474

Query: 4553 PFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRE 4732
            PFLKPFIFLGQR++K            P CQTHLYITEPNFGLCYNFDFI+EKEQREYRE
Sbjct: 1475 PFLKPFIFLGQRVEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDFIKEKEQREYRE 1534

Query: 4733 NMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 4912
            +MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN
Sbjct: 1535 DMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 1594

Query: 4913 YQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSD 5092
            YQRLS+AHLVGGLLY NFK+KMGLEF+FDQ LLEES+NAFEKKKLEKSCGTIKSHSIRSD
Sbjct: 1595 YQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSCGTIKSHSIRSD 1654

Query: 5093 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 5272
            IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP
Sbjct: 1655 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 1714

Query: 5273 EEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKV 5452
            EEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQ++
Sbjct: 1715 EEIYIHSNKNFDDLNVWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQEI 1774

Query: 5453 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDM 5632
            IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRGQPIAFAGDDM
Sbjct: 1775 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPIAFAGDDM 1834

Query: 5633 CALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 5812
            CALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPELVYNRFQVAIEE
Sbjct: 1835 CALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 1894

Query: 5813 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYI 5992
            GKVLECLENYAIEVSYAYSLSERLYEVLKSERQ+QYHQAVVRFIVTHIDKLKTKVRDL++
Sbjct: 1895 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHIDKLKTKVRDLFL 1954

Query: 5993 EQSSDEDI 6016
            EQSSDEDI
Sbjct: 1955 EQSSDEDI 1962


>gb|AUY61800.1| putative replicase polyprotein [Citrus leaf blotch virus]
          Length = 1962

 Score = 3204 bits (8307), Expect = 0.0
 Identities = 1552/1988 (78%), Positives = 1727/1988 (86%), Gaps = 3/1988 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDAIYNAAAQTI+SHSEFRNKHFAYSLNSYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENH+LFD+LP VVNTS+L+MCSIKESKVLVFK IRDK RR 
Sbjct: 61   IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120

Query: 419  VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNFIKSISGKE 598
            V +L   +SL   HTSFINRL+ASKD+SRYTEEADAFF S     ELFS NFIKS+  KE
Sbjct: 121  VSDLNALNSLNNSHTSFINRLVASKDVSRYTEEADAFFQSKKGSPELFSRNFIKSLENKE 180

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGRL 778
            AVFFHDEVHHWTKAQMFSFLK TKV+RFIFTVVYPPE+L+KFANSQNPK+YDFKVDKGRL
Sbjct: 181  AVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKGRL 240

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
            FFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKSIYAHHLFE+S GELVTDSK
Sbjct: 241  FFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTDSK 300

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
            LFFSDY SIDMSKIFLDRFRSYEVFPI+IEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD
Sbjct: 301  LFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 360

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FPQWKKKNTF
Sbjct: 361  DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKNTF 420

Query: 1319 EFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDDGC 1498
            EFLFSLGTLVV++ER+VCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNE+RVDDG 
Sbjct: 421  EFLFSLGTLVVDVERKVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEDRVDDGH 480

Query: 1499 LERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEFD- 1675
            LER+RLPFWN +DYDLKR+R N YDIL ++  EER+  S   GP+KMLQIEWYGIKEF  
Sbjct: 481  LERIRLPFWNLNDYDLKRKRVNAYDILSYRFEEERKIESVQKGPNKMLQIEWYGIKEFQV 540

Query: 1676 DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXSR 1855
            DPFI N+I++FTL EAL+GK++D +KYS SKQA  L   L+F+C               R
Sbjct: 541  DPFISNSITEFTLLEALLGKRIDPKKYSYSKQACTLSNYLTFLCAEGLDGFNLEEHLERR 600

Query: 1856 LQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHSF 2035
            L+ AGHD  +DE                  E+EL+ A+    A  I  L+D  G M    
Sbjct: 601  LKAAGHDISDDE------------------EEELTSAEQ---AGPIKILADPLGFM---- 635

Query: 2036 DNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPMDGNC 2215
              +  E+  +          +F  +     FEI+Y DIF P++C NTHG EIPTP DGNC
Sbjct: 636  -KECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSDGNC 694

Query: 2216 FFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFCVFRE 2395
            FFSAF   FE    + LR+DF++WL  F+GG++  L   IRPDGV+MEAELIYLFCVFR 
Sbjct: 695  FFSAFTETFEVERPDTLRSDFSDWLMEFNGGSYASLAEMIRPDGVFMEAELIYLFCVFRG 754

Query: 2396 VTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPCGYDE 2575
            VTL++HDR+ E E V+ +H GFEEGH+V +G HF+GIETY ++T   +P L D+PCG+ E
Sbjct: 755  VTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLDDIPCGFSE 814

Query: 2576 RLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICDQGDE 2755
             +TKF FRP+HFNC+QFRGRK AF+TKVDADYGHNGMVYPHNSWVPSLDEII+IC QGD+
Sbjct: 815  EITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLDEIIQICGQGDD 874

Query: 2756 FNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFF 2935
            FNCALINFY+++SSLGFH+DNE+VYNDDPILTVCT GEG  +IE K++ +SF+MTAGSFF
Sbjct: 875  FNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGTFTIEFKDQVTSFLMTAGSFF 934

Query: 2936 LMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRD 3115
            LMPKG+QK+ARHSV N   RVS+TFRKHVRRL+GSPIAIR++NY+N CLI A S A+ R 
Sbjct: 935  LMPKGFQKKARHSVSNEMSRVSITFRKHVRRLNGSPIAIREENYKNTCLIDAFSKAMKRS 994

Query: 3116 KQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRI 3295
            KQ IIAKL++VN PFWSR+LS+GNGGSIEDCQ+ACEAL + VDL V+GKC+V+G+G  RI
Sbjct: 995  KQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKCVVLGKGAFRI 1054

Query: 3296 SLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI-CAGVNYIQFAADY 3472
            S+AL+NNHFS +   + M+RTFVSHL +KGN+NVLEG+D ML  D+  AGVN IQFAA++
Sbjct: 1055 SMALKNNHFSVINAAQLMERTFVSHLLEKGNVNVLEGIDEMLSGDVGAAGVNKIQFAANF 1114

Query: 3473 ENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKSRQL 3652
            E AR LANSFLNMTTGICLG+ LD GEKYF H+L++R KQIG DVT +CGFAGSGKSR+L
Sbjct: 1115 EFARILANSFLNMTTGICLGKALDNGEKYFLHILKDRVKQIGIDVTMVCGFAGSGKSRKL 1174

Query: 3653 QSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDE 3832
            QSWLHS+KKGNFCVVSPR NLAADW+FKLELEPNE+RKV+TFE FIK DK KLDLI++DE
Sbjct: 1175 QSWLHSKKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSKLDLIVIDE 1234

Query: 3833 LTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDI 4012
            LTLFPNGYLDLLVYEL + N HC++ILLFDPLQARYHN+MDE IL FEHD DRL+GGQ I
Sbjct: 1235 LTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVDRLVGGQSI 1294

Query: 4013 QYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVES 4192
            +YIYS+HRMSR+FNRFFDVPCFNQA+ T EQ+LWIFDD+YSI SIC DR EPCDVLLVES
Sbjct: 1295 EYIYSTHRMSRYFNRFFDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQEPCDVLLVES 1354

Query: 4193 DLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTF 4372
            DLEKKAFSPI+NVMTFGESQGLTFNHVCI            RWMVALTR++TR S CSTF
Sbjct: 1355 DLEKKAFSPIMNVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRSRTRFSLCSTF 1414

Query: 4373 LGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERLEGD 4552
            LGG++EFKV++ ESL+TSILQ E ITF+RLN+M+KCNL+R EK+NGC DEVDREERLEGD
Sbjct: 1415 LGGVEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRREKENGCRDEVDREERLEGD 1474

Query: 4553 PFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRE 4732
            PFLKPFIFLGQR++K            P CQTHLYITEPNFGLCYNFDFIREKEQREYRE
Sbjct: 1475 PFLKPFIFLGQRVEKDENEVEEVKIREPTCQTHLYITEPNFGLCYNFDFIREKEQREYRE 1534

Query: 4733 NMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 4912
            +MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN
Sbjct: 1535 DMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 1594

Query: 4913 YQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSD 5092
            YQRLS+AHLVGGLLY NFK+KMGLEF+FDQ LLEES+NAFEKKKLEKSCGTIKSHSIRSD
Sbjct: 1595 YQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSCGTIKSHSIRSD 1654

Query: 5093 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 5272
            IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP
Sbjct: 1655 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 1714

Query: 5273 EEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKV 5452
            EEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQ++
Sbjct: 1715 EEIYIHSNKNFDDLNVWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQQI 1774

Query: 5453 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDM 5632
            IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRGQPIAFAGDDM
Sbjct: 1775 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPIAFAGDDM 1834

Query: 5633 CALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 5812
            CALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPELVYNRFQVAIEE
Sbjct: 1835 CALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 1894

Query: 5813 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYI 5992
            GKVLECLENYAIEVSYAYSLSERLYEVLKSERQ+QYHQAVVRFIVTHIDKLKTKVRDL++
Sbjct: 1895 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHIDKLKTKVRDLFL 1954

Query: 5993 EQSSDEDI 6016
            EQSSDEDI
Sbjct: 1955 EQSSDEDI 1962


>gb|ACH73184.1| replicase polyprotein [Dweet mottle virus]
          Length = 1962

 Score = 3204 bits (8307), Expect = 0.0
 Identities = 1554/1988 (78%), Positives = 1729/1988 (86%), Gaps = 3/1988 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDAIYNAAAQTI+SHSEFRNKHFAYSLNSYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENH+LFD+LP VVNTS+L+MCSIKESKVLVFK IRDK RR 
Sbjct: 61   IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120

Query: 419  VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNFIKSISGKE 598
            V +L   +SL   HTSFINRL+ASKD+SRYTEEADAFF S     ELFS NFIKS+  KE
Sbjct: 121  VSDLNALNSLNNSHTSFINRLVASKDVSRYTEEADAFFQSKKGSPELFSRNFIKSLENKE 180

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGRL 778
            AVFFHDEVHHWTKAQMFSFLK TKV+RFIFTVVYPPE+L+KFANSQNPK+YDFKVDKGRL
Sbjct: 181  AVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKGRL 240

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
            FFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKSIYAHHLFE+S GELVTDSK
Sbjct: 241  FFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTDSK 300

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
            LFFSDY SIDMSKIFLDRFRSYEVFPI+IEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD
Sbjct: 301  LFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 360

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FPQWKKKNTF
Sbjct: 361  DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKNTF 420

Query: 1319 EFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDDGC 1498
            EFLFSLGTLVV++ER+VCFEHVLEEWGFEVV+TDENAYLDPLSIFAINENFNE+RVDDG 
Sbjct: 421  EFLFSLGTLVVDVERKVCFEHVLEEWGFEVVITDENAYLDPLSIFAINENFNEDRVDDGY 480

Query: 1499 LERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEFD- 1675
            LER+RLPFWN +DYDLKR+R N Y+IL ++  EER+  S   GP+KMLQIEWYGIKEF  
Sbjct: 481  LERIRLPFWNLNDYDLKRKRVNAYNILSYRFEEERKIESAQKGPNKMLQIEWYGIKEFKV 540

Query: 1676 DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXSR 1855
            DPFI N+I++FTL EAL+GK++D +KYS SKQA  L   L+F+C               R
Sbjct: 541  DPFISNSITEFTLLEALLGKRIDPKKYSYSKQACTLSNYLTFLCAEGLDGFNLEEHLERR 600

Query: 1856 LQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHSF 2035
            L+ AGHD  +DE                  E+EL+ A+    A  I  L+D  G M    
Sbjct: 601  LKAAGHDISDDE------------------EEELTSAEQ---AGPIKILADPLGFM---- 635

Query: 2036 DNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPMDGNC 2215
              +  E+  +          +F  +     FEI+Y DIF P++C NTHG EIPTP DGNC
Sbjct: 636  -KECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSDGNC 694

Query: 2216 FFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFCVFRE 2395
            FFSAF   FE    + LR+DF++WL  F+GG++  L   IRP+GV+MEAELIYLFCVFR 
Sbjct: 695  FFSAFTETFEVERPDTLRSDFSDWLMEFNGGSYASLAEMIRPNGVFMEAELIYLFCVFRG 754

Query: 2396 VTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPCGYDE 2575
            VTL++HDR+ E E V+ +H GFEEGH+V +G HF+GIETY ++T   +P L D+PCG+ E
Sbjct: 755  VTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLGDIPCGFSE 814

Query: 2576 RLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICDQGDE 2755
             +TKF FRP+HFNC+QFRGRK AF+TKVDADYGHNGMVYPHNSWVPSL+EII+IC QGD+
Sbjct: 815  EITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLEEIIQICGQGDD 874

Query: 2756 FNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFF 2935
            FNCALINFY+++SSLGFH+DNE+VYNDDPILTVCT GEG  +IE K++ +SF+MTAGSFF
Sbjct: 875  FNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGTFTIEFKDQVTSFLMTAGSFF 934

Query: 2936 LMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRD 3115
            LMPKG+QK+ARHSV N  PRVS+TFRKHVRRL+GSPIAIR++NY+N CLI+A S A+ R 
Sbjct: 935  LMPKGFQKKARHSVSNEMPRVSITFRKHVRRLNGSPIAIREENYKNTCLINAFSKAMKRS 994

Query: 3116 KQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRI 3295
            KQ IIAKL++VN PFWSR+LS+GNGGSIEDCQ+ACEAL + VDL V+GK +V+G+G LRI
Sbjct: 995  KQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKYVVLGKGALRI 1054

Query: 3296 SLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI-CAGVNYIQFAADY 3472
            S+AL+NNHFS +   + M+RTFVSHL +KGN+NVLEG D ML  D+  AGVN IQFAA++
Sbjct: 1055 SMALKNNHFSVINAAQLMERTFVSHLLEKGNVNVLEGFDEMLSGDVGAAGVNKIQFAANF 1114

Query: 3473 ENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKSRQL 3652
            E AR LANSFLNMTTGICLG+ LD GEKYF H+L++R KQIG DVT +CGFAGSGKSR+L
Sbjct: 1115 EFARILANSFLNMTTGICLGKALDNGEKYFLHILKDRVKQIGTDVTMVCGFAGSGKSRKL 1174

Query: 3653 QSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDE 3832
            QSWLHSRKKGNFCVVSPR NLAADW+FKLELEPNE+RKV+TFE FIK DK KLDLI++DE
Sbjct: 1175 QSWLHSRKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSKLDLIVIDE 1234

Query: 3833 LTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDI 4012
            LTLFPNGYLDLLVYEL + N HC++ILLFDPLQARYHN+MDE IL FEHD DRLIGGQ+I
Sbjct: 1235 LTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVDRLIGGQNI 1294

Query: 4013 QYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVES 4192
            +YIYS+HRMSR+FNRFFDVPCFNQA+ T EQ+LWIFDD+YSI SIC DR EPCDVLLVES
Sbjct: 1295 EYIYSTHRMSRYFNRFFDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQEPCDVLLVES 1354

Query: 4193 DLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTF 4372
            DLEKKAFSPIINVMTFGESQGLTFNHVCI            RWMVALTRA+TR S CSTF
Sbjct: 1355 DLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRARTRFSLCSTF 1414

Query: 4373 LGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERLEGD 4552
            LGGI+EFKV++ ESL+TSILQ E ITF+RLN+M+KCNL+R EK+NGC DEVDREERLEGD
Sbjct: 1415 LGGIEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRREKENGCRDEVDREERLEGD 1474

Query: 4553 PFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRE 4732
            PFLKPFIFLGQRI+K            P CQTHLYITEPNFGLCYNFDFIREKEQREYRE
Sbjct: 1475 PFLKPFIFLGQRIEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDFIREKEQREYRE 1534

Query: 4733 NMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 4912
            +MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRKRL+FREEEEN
Sbjct: 1535 DMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRKRLIFREEEEN 1594

Query: 4913 YQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSD 5092
            YQRLS+AHLVGGLLY NFK+KMGLEF+FDQ LLEES+NAFEKKKLEKSCGTIKSHSIRSD
Sbjct: 1595 YQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSCGTIKSHSIRSD 1654

Query: 5093 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 5272
            IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP
Sbjct: 1655 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 1714

Query: 5273 EEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKV 5452
            EEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFE+HLMKDAHFPQK+
Sbjct: 1715 EEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEIHLMKDAHFPQKI 1774

Query: 5453 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDM 5632
            IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRGQPIAFAGDDM
Sbjct: 1775 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPIAFAGDDM 1834

Query: 5633 CALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 5812
            CALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPELVYNRFQVAIEE
Sbjct: 1835 CALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 1894

Query: 5813 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYI 5992
            GKVLECLENYAIEVSYAYSLSERLYEVLKSERQ+QYHQAVVRFIVTHIDKLKTKVRDL++
Sbjct: 1895 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHIDKLKTKVRDLFL 1954

Query: 5993 EQSSDEDI 6016
            EQSSDEDI
Sbjct: 1955 EQSSDEDI 1962


>gb|AUY61803.1| putative replicase polyprotein [Citrus leaf blotch virus]
          Length = 1962

 Score = 3204 bits (8306), Expect = 0.0
 Identities = 1552/1988 (78%), Positives = 1727/1988 (86%), Gaps = 3/1988 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDAIYNAAAQTI+SHSEFRNKHFAYSLNSYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENH+LFD+LP VVNTS+L+MCSIKESKVLVFK IRDK RR 
Sbjct: 61   IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120

Query: 419  VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNFIKSISGKE 598
            V +L   +SL   HTSFINRL+ASKD+SRYTEEADAFF S     ELFS NFIKS+  KE
Sbjct: 121  VSDLNALNSLNNSHTSFINRLVASKDVSRYTEEADAFFQSKKGSPELFSRNFIKSLENKE 180

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGRL 778
            AVFFHDEVHHWTKAQMFSFLK TKV+RFIFTVVYPPE+L+KFANSQNPK+YDFKVDKGRL
Sbjct: 181  AVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKGRL 240

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
            FFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKSIYAHHLFE+S GELVTDSK
Sbjct: 241  FFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTDSK 300

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
            LFFSDY SIDMSKIFLDRFRSYEVFPI+IEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD
Sbjct: 301  LFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 360

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FPQWKKKNTF
Sbjct: 361  DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKNTF 420

Query: 1319 EFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDDGC 1498
            EFLFSLGTLVV++ER+VCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNE+RVDDG 
Sbjct: 421  EFLFSLGTLVVDVERKVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEDRVDDGH 480

Query: 1499 LERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEFD- 1675
            LER+RLPFWN +DYDLKR+R N YDIL ++  EER+  S   GP+KMLQIEWYGIKEF  
Sbjct: 481  LERIRLPFWNLNDYDLKRKRVNAYDILSYRFEEERKIESVQKGPNKMLQIEWYGIKEFQV 540

Query: 1676 DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXSR 1855
            DPFI N+I++FTL EAL+GK++D +KYS SKQA  L   L+F+C               R
Sbjct: 541  DPFISNSITEFTLLEALLGKRIDPKKYSYSKQACTLSNYLTFLCAEGLDGFNLEEHLERR 600

Query: 1856 LQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHSF 2035
            L+ AGHD  +DE                  E+EL+ A+    A  I  L+D  G M    
Sbjct: 601  LKAAGHDISDDE------------------EEELTSAEQ---AGPIKILADPLGFM---- 635

Query: 2036 DNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPMDGNC 2215
              +  E+  +          +F  +     FEI+Y DIF P++C NTHG EIPTP DGNC
Sbjct: 636  -KECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSDGNC 694

Query: 2216 FFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFCVFRE 2395
            FFSAF   FE    + LR+DF++WL  F+GG++  L   IRPDGV+MEAELIYLFCVFR 
Sbjct: 695  FFSAFTETFEVERPDTLRSDFSDWLMEFNGGSYASLAEMIRPDGVFMEAELIYLFCVFRG 754

Query: 2396 VTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPCGYDE 2575
            VTL++HDR+ E E V+ +H GFEEGH+V +G HF+GIETY ++T   +P L D+PCG+ E
Sbjct: 755  VTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLDDIPCGFSE 814

Query: 2576 RLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICDQGDE 2755
             +TKF FRP+HFNC+QFRGRK AF+TKVDADYGHNGMVYPHNSWVPSLDEII+IC QGD+
Sbjct: 815  EITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLDEIIQICGQGDD 874

Query: 2756 FNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFF 2935
            FNCALINFY+++SSLGFH+DNE+VYNDDPILTVCT GEG  +IE K++ +SF+MTAGSFF
Sbjct: 875  FNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGTFTIEFKDQVTSFLMTAGSFF 934

Query: 2936 LMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRD 3115
            LMPKG+QK+ARHSV N   RVS+TFRKHVRRL+GSPIAIR++NY+N CLI A S A+ R 
Sbjct: 935  LMPKGFQKKARHSVSNEMSRVSITFRKHVRRLNGSPIAIREENYKNTCLIDAFSKAMKRS 994

Query: 3116 KQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRI 3295
            KQ IIAKL++VN PFWSR+LS+GNGGSIEDCQ+ACEAL + VDL V+GKC+V+G+G  RI
Sbjct: 995  KQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKCVVLGKGAFRI 1054

Query: 3296 SLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI-CAGVNYIQFAADY 3472
            S+AL+NNHFS +   + M+RTFVSHL +KGN+NVLEG+D ML  D+  AGVN IQFAA++
Sbjct: 1055 SMALKNNHFSVINAAQLMERTFVSHLLEKGNVNVLEGIDEMLSGDVGAAGVNKIQFAANF 1114

Query: 3473 ENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKSRQL 3652
            E AR LANSFLNMTTGICLG+ LD GEKYF H+L++R KQIG DVT +CGFAGSGKSR+L
Sbjct: 1115 EFARILANSFLNMTTGICLGKALDNGEKYFLHILKDRVKQIGVDVTMVCGFAGSGKSRKL 1174

Query: 3653 QSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDE 3832
            QSWLHS+KKGNFCVVSPR NLAADW+FKLELEPNE+RKV+TFE FIK DK KLDLI++DE
Sbjct: 1175 QSWLHSKKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSKLDLIVIDE 1234

Query: 3833 LTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDI 4012
            LTLFPNGYLDLLVYEL + N HC++ILLFDPLQARYHN+MDE IL FEHD DRL+GGQ I
Sbjct: 1235 LTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVDRLVGGQSI 1294

Query: 4013 QYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVES 4192
            +YIYS+HRMSR+FNRFFDVPCFNQA+ T EQ+LWIFDD+YSI SIC DR EPCDVLLVES
Sbjct: 1295 EYIYSTHRMSRYFNRFFDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQEPCDVLLVES 1354

Query: 4193 DLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTF 4372
            DLEKKAFSPI+NVMTFGESQGLTFNHVCI            RWMVALTR++TR S CSTF
Sbjct: 1355 DLEKKAFSPIMNVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRSRTRFSLCSTF 1414

Query: 4373 LGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERLEGD 4552
            LGG++EFKV++ ESL+TSILQ E ITF+RLN+M+KCNL+R EK+NGC DEVDREERLEGD
Sbjct: 1415 LGGVEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRREKENGCRDEVDREERLEGD 1474

Query: 4553 PFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRE 4732
            PFLKPFIFLGQR++K            P CQTHLYITEPNFGLCYNFDFIREKEQREYRE
Sbjct: 1475 PFLKPFIFLGQRVEKDENEVEEVKIREPTCQTHLYITEPNFGLCYNFDFIREKEQREYRE 1534

Query: 4733 NMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 4912
            +MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN
Sbjct: 1535 DMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 1594

Query: 4913 YQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSD 5092
            YQRLS+AHLVGGLLY NFK+KMGLEF+FDQ LLEES+NAFEKKKLEKSCGTIKSHSIRSD
Sbjct: 1595 YQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSCGTIKSHSIRSD 1654

Query: 5093 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 5272
            IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP
Sbjct: 1655 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 1714

Query: 5273 EEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKV 5452
            EEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQ++
Sbjct: 1715 EEIYIHSNKNFDDLNVWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQQI 1774

Query: 5453 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDM 5632
            IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRGQPIAFAGDDM
Sbjct: 1775 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPIAFAGDDM 1834

Query: 5633 CALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 5812
            CALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPELVYNRFQVAIEE
Sbjct: 1835 CALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 1894

Query: 5813 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYI 5992
            GKVLECLENYAIEVSYAYSLSERLYEVLKSERQ+QYHQAVVRFIVTHIDKLKTKVRDL++
Sbjct: 1895 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHIDKLKTKVRDLFL 1954

Query: 5993 EQSSDEDI 6016
            EQSSDEDI
Sbjct: 1955 EQSSDEDI 1962


>gb|ACF94738.1| putative replicase polyprotein [Citrus leaf blotch virus]
          Length = 1962

 Score = 3201 bits (8300), Expect = 0.0
 Identities = 1550/1988 (77%), Positives = 1726/1988 (86%), Gaps = 3/1988 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDAIYNAAAQTI+SHSEFRNKHFAYSLNSYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENH+LFD+LP VVNTS+L+MCSIKESKVLVFK IRDK RR 
Sbjct: 61   IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120

Query: 419  VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNFIKSISGKE 598
            V +L   +SL   HTSFINRL+ASKD+SRYTEEADAFF S   G ELFS NFIKS+  KE
Sbjct: 121  VSDLNALNSLNNSHTSFINRLVASKDVSRYTEEADAFFQSKKGGPELFSRNFIKSLENKE 180

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGRL 778
            AVFFHDEVHHWTKAQMFSFLK TKV+RFIFTVVYPPE+L+KFANSQNPK+YDFKVDKGRL
Sbjct: 181  AVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKGRL 240

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
            FFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKSIYAHHLFE+S GELVTDSK
Sbjct: 241  FFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTDSK 300

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
            LFFSDY SIDMSKIFLDRFRSYEVFPI+IEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD
Sbjct: 301  LFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 360

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FPQWKKKNTF
Sbjct: 361  DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKNTF 420

Query: 1319 EFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDDGC 1498
            EFLFSLGTLVV++ER+VCFEHVLEEWGFEVV+TDENAYLDPLSIFAINENFNE+RVDDG 
Sbjct: 421  EFLFSLGTLVVDVERKVCFEHVLEEWGFEVVITDENAYLDPLSIFAINENFNEDRVDDGY 480

Query: 1499 LERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEFD- 1675
            LER+RLPFWN +DYDLKR+R N YDIL ++  EER+  S   GP+KMLQIEWYGIKEF  
Sbjct: 481  LERIRLPFWNLNDYDLKRKRVNAYDILSYRFEEERKIESAQKGPNKMLQIEWYGIKEFKV 540

Query: 1676 DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXSR 1855
            DPFI N+I++FTL EAL+GK++D +KYS SKQA  L   L+F+C               R
Sbjct: 541  DPFISNSITEFTLLEALLGKRIDPKKYSYSKQACTLSNYLTFLCAEGLDGFNLEEHLERR 600

Query: 1856 LQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHSF 2035
            L+ AGHD+ +DE                  E+EL+  +       I  L+D       SF
Sbjct: 601  LKAAGHDTSDDE------------------EEELTSVEQTGP---IKILADP-----LSF 634

Query: 2036 DNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPMDGNC 2215
             N+  E+  +          +F  +     FEI+Y DIF P++C NTHG EIPTP DGNC
Sbjct: 635  MNECLEEIPIETEPSLEERGQFSTDYHSEKFEINYNDIFNPHNCMNTHGDEIPTPSDGNC 694

Query: 2216 FFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFCVFRE 2395
            FFSAF   FE    + LR+DF++WL  F+GG++  L   IRPDG++MEAELIYLFCVFR 
Sbjct: 695  FFSAFTETFEVERPDTLRSDFSDWLMEFNGGSYASLAEMIRPDGIFMEAELIYLFCVFRG 754

Query: 2396 VTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPCGYDE 2575
            VTL++HDR+ + E V+ +H GFEEGH+V +G HF+GIETY V+T   +P L D+PCG+ E
Sbjct: 755  VTLIIHDRTHKKENVYAVHRGFEEGHMVHRGNHFVGIETYNVSTLTSDPLLGDIPCGFSE 814

Query: 2576 RLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICDQGDE 2755
             +TKF FRP+HFNC+QFRGRK AF+TKVDADYGHNGMVYPHNSWVPSLDEII+IC QGD+
Sbjct: 815  EITKFHFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLDEIIQICGQGDD 874

Query: 2756 FNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFF 2935
            FNCALINFY+++SSLGFH+DNE+VYNDDPILTVCT GEG  +IE K++ +SF+MTAGSFF
Sbjct: 875  FNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGTFTIEFKDQVTSFLMTAGSFF 934

Query: 2936 LMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRD 3115
            LMPKG+QK+ARHSV N  PRVS+TFRKHVRRL+GSPIAIR++NY+N CLI A S A+ R 
Sbjct: 935  LMPKGFQKKARHSVSNGMPRVSITFRKHVRRLNGSPIAIREENYKNTCLIDAFSKAMKRS 994

Query: 3116 KQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRI 3295
            KQ IIAKL++VN PFWSR+LS+GNGGSIEDCQ+ACEAL + VDL V GK +V+G+G  RI
Sbjct: 995  KQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVSGKYVVLGKGAFRI 1054

Query: 3296 SLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI-CAGVNYIQFAADY 3472
            S+AL++NHFS +   + M+RTFVSHL +KGN+NVLEG D ML  D+  AGVN IQFAA++
Sbjct: 1055 SMALKDNHFSVINNAQLMERTFVSHLLEKGNVNVLEGFDEMLSGDVGAAGVNKIQFAANF 1114

Query: 3473 ENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKSRQL 3652
            E AR LANSFLNMTTGICLG+ LD GEKYF H+L++R KQIG DVT +CGFAGSGKSR+L
Sbjct: 1115 EFARILANSFLNMTTGICLGKALDNGEKYFLHILKDRVKQIGIDVTMVCGFAGSGKSRKL 1174

Query: 3653 QSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDE 3832
            QSWLHSRKKGNFCVVSPR NLAADW+FKLELEPNE+RKV+TFE FIK DK KLDLI++DE
Sbjct: 1175 QSWLHSRKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSKLDLIVIDE 1234

Query: 3833 LTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDI 4012
            LTLFPNGYLDLLVYEL + N HC++ILLFDPLQAR+HN+MDE IL FEHD DRL+GGQ I
Sbjct: 1235 LTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARHHNKMDESILTFEHDVDRLVGGQSI 1294

Query: 4013 QYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVES 4192
            +YIYS+HRMSR+FNRFFDVPCFNQA+ T EQ+LWIFDD+YSI SIC DR EPCDVLLVES
Sbjct: 1295 EYIYSTHRMSRYFNRFFDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQEPCDVLLVES 1354

Query: 4193 DLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTF 4372
            DLEKKAFSPI+NVMTFGESQGLTFNHVCI            RWMVALTR++TR S CSTF
Sbjct: 1355 DLEKKAFSPIMNVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRSRTRFSLCSTF 1414

Query: 4373 LGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERLEGD 4552
            LGGI+EFKV++ ESL+TSILQ E ITF+RLN+M+KCNL+R EK+NGC DEVDREERLEGD
Sbjct: 1415 LGGIEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRREKENGCRDEVDREERLEGD 1474

Query: 4553 PFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRE 4732
            PFLKPFIFLGQRI+K            P CQTHLYITEPNFGLCYNFDFIREKEQREYRE
Sbjct: 1475 PFLKPFIFLGQRIEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDFIREKEQREYRE 1534

Query: 4733 NMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 4912
            +MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN
Sbjct: 1535 DMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 1594

Query: 4913 YQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSD 5092
            YQRLS+AHLVGGLLY NFK+KMGLEF+FDQ LLEES+NAFEKKKLEKSCGTIKSHSIRSD
Sbjct: 1595 YQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSCGTIKSHSIRSD 1654

Query: 5093 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 5272
            IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP
Sbjct: 1655 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 1714

Query: 5273 EEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKV 5452
            EEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFE+HLMKDAHFP+K+
Sbjct: 1715 EEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEIHLMKDAHFPRKI 1774

Query: 5453 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDM 5632
            IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRGQPIAFAGDDM
Sbjct: 1775 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPIAFAGDDM 1834

Query: 5633 CALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 5812
            CALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPELVYNRFQVAIEE
Sbjct: 1835 CALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 1894

Query: 5813 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYI 5992
            GKVLECLENYAIEVSYAYSLSERLYEVLKSERQ+QYHQAVVRFIVTHIDKLKTKVRDL++
Sbjct: 1895 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHIDKLKTKVRDLFL 1954

Query: 5993 EQSSDEDI 6016
            EQSSDEDI
Sbjct: 1955 EQSSDEDI 1962


>gb|ACF94740.1| putative replicase polyprotein [Citrus leaf blotch virus]
          Length = 1962

 Score = 3190 bits (8272), Expect = 0.0
 Identities = 1549/1988 (77%), Positives = 1720/1988 (86%), Gaps = 3/1988 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MALMSNKTAIESILGNF+KKHVDAIYNAAAQTI+SHSEFRNKHFAYSLNSYQKKIASKVG
Sbjct: 1    MALMSNKTAIESILGNFEKKHVDAIYNAAAQTILSHSEFRNKHFAYSLNSYQKKIASKVG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRR- 418
            IELYPNGY+PHSHPLSKIFENH+LFD+LP VVNTS+L+MCSIKESKVLVFK IRDK RR 
Sbjct: 61   IELYPNGYLPHSHPLSKIFENHLLFDVLPGVVNTSRLVMCSIKESKVLVFKGIRDKSRRQ 120

Query: 419  VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNFIKSISGKE 598
            V +L   +SL   HTSFINRL+ASKD+SRYTEEADAFF S     ELFS NFIKS+  KE
Sbjct: 121  VSDLNALNSLDNSHTSFINRLVASKDVSRYTEEADAFFQSKKGSPELFSRNFIKSLENKE 180

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGRL 778
            AVFFHDEVHHWTKAQMFSFLK TKV+RFIFTVVYPPE+L+KFANSQNPK+YDFKVDKGRL
Sbjct: 181  AVFFHDEVHHWTKAQMFSFLKSTKVKRFIFTVVYPPEILKKFANSQNPKVYDFKVDKGRL 240

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
            FFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKSIYAHHLFE+S GELVTDSK
Sbjct: 241  FFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSIYAHHLFEISIGELVTDSK 300

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
            LFFSDY SIDMSKIFLDRFRSYEVFPI+IEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD
Sbjct: 301  LFFSDYNSIDMSKIFLDRFRSYEVFPISIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 360

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FPQWKKKNTF
Sbjct: 361  DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFEKLTDMALSSLPNSIARIFPQWKKKNTF 420

Query: 1319 EFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFNEERVDDGC 1498
            EFLFSLGTLVV++ER+VCFEHVLEEWGFEVV+TDENAYLDPLSIFAINENFNE R DDG 
Sbjct: 421  EFLFSLGTLVVDVERKVCFEHVLEEWGFEVVITDENAYLDPLSIFAINENFNEGRADDGY 480

Query: 1499 LERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEWYGIKEFD- 1675
            LER+RLPFWN +DYDLKRRR N Y+IL ++  EER   S   GP+KMLQIEW+GIKEF  
Sbjct: 481  LERIRLPFWNLNDYDLKRRRVNVYNILSYRFEEERRIESAQKGPNKMLQIEWHGIKEFKV 540

Query: 1676 DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXXXXXXXXSR 1855
            DPFI N+I++FTL EAL+GK++D +KYS SKQA  L   L+F+C               R
Sbjct: 541  DPFISNSITEFTLLEALLGKRIDPKKYSYSKQACTLSNYLTFLCAEGLDGFNLEEHLERR 600

Query: 1856 LQLAGHDSIEDEGDRLREEIEDFDDEVDRAEKELSKAKNQRMALFIPTLSDADGSMVHSF 2035
            L+ AGHD  +DE                  E+EL+ A+    A  I  L+D  G M    
Sbjct: 601  LKAAGHDISDDE------------------EEELTSAEQ---AGPIKILADPLGFM---- 635

Query: 2036 DNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGKEIPTPMDGNC 2215
              +  E+  +          +F  +     FEI+Y DIF P++C NTHG EIPTP DGNC
Sbjct: 636  -KECLEEIPIETEPSLEERGQFSTDYHSERFEINYNDIFNPHNCMNTHGDEIPTPSDGNC 694

Query: 2216 FFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAELIYLFCVFRE 2395
            FFSAF   FE    + LR+DF++WL  F+GG++  L   IRPDGV+MEAELIYLFCVFR 
Sbjct: 695  FFSAFTETFEVERPDTLRSDFSDWLMEFNGGSYASLAEMIRPDGVFMEAELIYLFCVFRG 754

Query: 2396 VTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPDLSDLPCGYDE 2575
            VTL++HDR+ E E V+ +H GFEEGH+V +G HF+GIETY ++T   +P L D+PCG+ E
Sbjct: 755  VTLIIHDRTHEKENVYAVHRGFEEGHMVHRGNHFVGIETYNISTLTSDPLLGDIPCGFSE 814

Query: 2576 RLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDEIIKICDQGDE 2755
             +TKF FRP+HFNC+QFRGRK AF+TKVDADYGHNGMVYPHNSWVPSLDEII+IC QGD+
Sbjct: 815  EITKFRFRPDHFNCAQFRGRKAAFITKVDADYGHNGMVYPHNSWVPSLDEIIQICGQGDD 874

Query: 2756 FNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFF 2935
            FNCALINFY+++SSLGFH+DNE+VYNDDPILTVCT GEG  +IE K + +SF+MTAGSFF
Sbjct: 875  FNCALINFYEANSSLGFHRDNERVYNDDPILTVCTFGEGTFTIEFKGQVTSFLMTAGSFF 934

Query: 2936 LMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRD 3115
            LMPKG+QK+ARHSV N   RVS+TFRKHVRRL+GSPIAIR++NY+N  LI A S A+ R 
Sbjct: 935  LMPKGFQKKARHSVSNEMSRVSITFRKHVRRLNGSPIAIREENYKNTRLIDAFSKAMKRS 994

Query: 3116 KQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRI 3295
            KQ IIAKL++VN PFWSR+LS+GNGGSIEDCQ+ACEAL + VDL V+GKC+V+G+G  RI
Sbjct: 995  KQAIIAKLKTVNSPFWSRYLSEGNGGSIEDCQSACEALDVTVDLNVNGKCVVLGKGAFRI 1054

Query: 3296 SLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI-CAGVNYIQFAADY 3472
            S+AL+NNHFS +   + M+RTFVSHL +KG++NVLEG D +L  D+  AGVN IQFAA++
Sbjct: 1055 SMALKNNHFSVINAAQLMERTFVSHLLEKGDINVLEGFDEILSGDVGAAGVNKIQFAANF 1114

Query: 3473 ENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICGFAGSGKSRQL 3652
            E AR LANSFLNMTTGICLG+ LD GEKYF H+L++R KQIG DVT +CGFAGSGKSR+L
Sbjct: 1115 EFARILANSFLNMTTGICLGKALDNGEKYFLHILKDRVKQIGIDVTVVCGFAGSGKSRKL 1174

Query: 3653 QSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDE 3832
            QSWLHSRKKGNFCVVSPR NLAADW+FKLELEPNE+RKV+TFE FIK DK KLDLI++DE
Sbjct: 1175 QSWLHSRKKGNFCVVSPRTNLAADWAFKLELEPNEQRKVSTFEKFIKTDKSKLDLIVIDE 1234

Query: 3833 LTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDI 4012
            LTLFPNGYLDLLVYEL + N HC++ILLFDPLQARYHN+MDE IL FEHD DRL+GGQ I
Sbjct: 1235 LTLFPNGYLDLLVYELADVNRHCQIILLFDPLQARYHNKMDESILTFEHDVDRLVGGQSI 1294

Query: 4013 QYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVES 4192
            +YIYS+HRMSR+FNRFFDVPCFNQA+ T EQ+LWIFDD+YSI SIC DR EPCDVLLVES
Sbjct: 1295 EYIYSTHRMSRYFNRFFDVPCFNQADRTEEQRLWIFDDVYSIPSICSDRQEPCDVLLVES 1354

Query: 4193 DLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTF 4372
            DLEKKAFSPI+NVMTFGESQGLTFNHVCI            RWMVALTR++TR S CSTF
Sbjct: 1355 DLEKKAFSPIMNVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRSRTRFSLCSTF 1414

Query: 4373 LGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREERLEGD 4552
            LGGI+EFKV++ ESL+TSILQ E ITF+RLN+M+KCNL+R EK+NGC DEVDREERLEGD
Sbjct: 1415 LGGIEEFKVKRKESLITSILQGEKITFNRLNLMLKCNLIRREKENGCRDEVDREERLEGD 1474

Query: 4553 PFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRE 4732
            PFLKPFIFLGQRI+K            P CQTHLYITEPNFGLCYNFDFIREKEQREYRE
Sbjct: 1475 PFLKPFIFLGQRIEKDEDEVEEVKIREPTCQTHLYITEPNFGLCYNFDFIREKEQREYRE 1534

Query: 4733 NMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 4912
            +MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN
Sbjct: 1535 DMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRKRLVFREEEEN 1594

Query: 4913 YQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSD 5092
            YQRLS+AHLVGGLLY NFK+KMGLEF+FDQ LLEES+NAFEKKKLEKSCGTIKSHSIRSD
Sbjct: 1595 YQRLSRAHLVGGLLYTNFKKKMGLEFTFDQGLLEESINAFEKKKLEKSCGTIKSHSIRSD 1654

Query: 5093 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 5272
            IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP
Sbjct: 1655 IDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLP 1714

Query: 5273 EEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKV 5452
            EEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQK+
Sbjct: 1715 EEIYIHSNKNFDDLNAWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKI 1774

Query: 5453 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDM 5632
            IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRGQPIAFAGDDM
Sbjct: 1775 IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRGQPIAFAGDDM 1834

Query: 5633 CALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEE 5812
            CALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPEL YNRFQVAIEE
Sbjct: 1835 CALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELAYNRFQVAIEE 1894

Query: 5813 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYI 5992
            GKVLECLENYAIEVSYAYSLSERLYEVLKSERQ+QYHQAVVRFIVTHIDKLKTKVRDL++
Sbjct: 1895 GKVLECLENYAIEVSYAYSLSERLYEVLKSERQVQYHQAVVRFIVTHIDKLKTKVRDLFL 1954

Query: 5993 EQSSDEDI 6016
            EQSSDEDI
Sbjct: 1955 EQSSDEDI 1962


>gb|AMH87249.1| replicase polyprotein [Citrus leaf blotch virus]
          Length = 1979

 Score = 3184 bits (8256), Expect = 0.0
 Identities = 1546/1998 (77%), Positives = 1725/1998 (86%), Gaps = 13/1998 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHV--------DAIYNAAAQTIISHSEFRNKHFAYSLNSYQ 217
            MALMSNKTAIESILGNF+KKHV        DAIYNAAAQTI+SHSEFRNKHFAYSLNSYQ
Sbjct: 1    MALMSNKTAIESILGNFEKKHVRSSSFQQDDAIYNAAAQTILSHSEFRNKHFAYSLNSYQ 60

Query: 218  KKIASKVGIELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKN 397
            KK+ASKVGIELYPNGY+PHSHPLSKIFENH+LFD+LPSVVNTS+L+MCSIKESKVLVFKN
Sbjct: 61   KKVASKVGIELYPNGYLPHSHPLSKIFENHLLFDVLPSVVNTSRLVMCSIKESKVLVFKN 120

Query: 398  IRDKKRR-VFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNGSGSELFSNNF 574
            IRD+ R+   ++    SL  DHT+FINRL+ASKDISRY+EEADAFF S     ELFS NF
Sbjct: 121  IRDRSRKGTSDISTLDSLKNDHTTFINRLVASKDISRYSEEADAFFQSKRDSPELFSKNF 180

Query: 575  IKSISGKEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYD 754
            IKS+  KE++FFHDEVHHWTKAQMFSFLK TKV+RFIFT+VYPPE+L+KFANSQNPKIYD
Sbjct: 181  IKSLQNKESIFFHDEVHHWTKAQMFSFLKSTKVKRFIFTLVYPPEILKKFANSQNPKIYD 240

Query: 755  FKVDKGRLFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSA 934
            FKVDKGRLFFFPDGVKTEAYEQKLNMEWLFSASHL+SGD  WTVTRHKS+YAHHLFE+S 
Sbjct: 241  FKVDKGRLFFFPDGVKTEAYEQKLNMEWLFSASHLRSGDCVWTVTRHKSVYAHHLFEISV 300

Query: 935  GELVTDSKLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLA 1114
            GELVTDSK+FFSDY SIDMSKIFLDRFRSY+VFPI+IEHLYKVYSYLLCLKKPDLESGLA
Sbjct: 301  GELVTDSKIFFSDYSSIDMSKIFLDRFRSYDVFPISIEHLYKVYSYLLCLKKPDLESGLA 360

Query: 1115 KLRQIIGDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFP 1294
            KLRQIIGDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFF KLTDMALS +PN +AR+FP
Sbjct: 361  KLRQIIGDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFQKLTDMALSSLPNGIARIFP 420

Query: 1295 QWKKKNTFEFLFSLGTLVVEIERRVCFEHVLEEWGFEVVVTDENAYLDPLSIFAINENFN 1474
            QWKKKNTFEFLFSLGTLVV+IER+VC+EHVLE+WGFEVV+TDENAYLDPLSIFAINENFN
Sbjct: 421  QWKKKNTFEFLFSLGTLVVDIERKVCYEHVLEKWGFEVVITDENAYLDPLSIFAINENFN 480

Query: 1475 EERVDDGCLERVRLPFWNSSDYDLKRRRANKYDILCHQLNEERESGSKGMGPHKMLQIEW 1654
            E+RVDDG LERVRLPFWN SDYDLKRRR N YDIL  +  E+R+  S   GP+KMLQIEW
Sbjct: 481  EDRVDDGFLERVRLPFWNLSDYDLKRRRMNAYDILSSRFEEDRKIESMQKGPNKMLQIEW 540

Query: 1655 YGIKEFD-DPFICNAISKFTLFEALVGKKVDRRKYSCSKQADVLHKCLSFICXXXXXXXX 1831
            YGIKEF+ DPFI N+I+KFTLFEALVGK+V+ RKYS SKQA  L   L+F+C        
Sbjct: 541  YGIKEFEVDPFISNSITKFTLFEALVGKRVNPRKYSYSKQACTLSNYLTFLCAEGLDGFN 600

Query: 1832 XXXXXXSRLQLAGHDSIEDEGDRLREEIEDFDDEVDRAE--KELSKAKNQRMALFIPTLS 2005
                   RL+L GHD+ +D            D+E D  E  + +S        L    L 
Sbjct: 601  MEEHLERRLKLIGHDTPDDA-----------DEEPDGIEHTESISPFFVDPSDLLRECLE 649

Query: 2006 DADGSMVHSFDNDTCEQANVANNCEGIIADEFGVEVERRGFEIDYKDIFRPYDCPNTHGK 2185
            +     VH        + NV    E +I     ++   + FEI+Y D+F+P++C N HG 
Sbjct: 650  ETSTEHVHEVS-----EVNVPPEREELIIP---IDHCPKKFEINYGDMFKPHNCMNMHGD 701

Query: 2186 EIPTPMDGNCFFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFRELGLKIRPDGVYMEAE 2365
            EIPTP DGNCFFSAF   FE  +  +LR+DF+NWL  FDGG+F EL  +I PDGVYMEAE
Sbjct: 702  EIPTPSDGNCFFSAFAETFEVDNPGELRSDFSNWLMVFDGGSFAELAKRIEPDGVYMEAE 761

Query: 2366 LIYLFCVFREVTLVLHDRSCETEKVFVIHAGFEEGHIVQKGEHFLGIETYIVNTSLPEPD 2545
            LIYLFCVFREVTLV+HDRS E E V+ IH+GFEEGH+V +G+HF+GIETY V  +  +P 
Sbjct: 762  LIYLFCVFREVTLVIHDRSQEKENVYAIHSGFEEGHMVHRGDHFVGIETYRVEDTFSDPL 821

Query: 2546 LSDLPCGYDERLTKFLFRPEHFNCSQFRGRKGAFLTKVDADYGHNGMVYPHNSWVPSLDE 2725
            LSDLPCG+ E LTKF F+P+HFNC+QFRGRK AFLTKVDADYGHNGM+YPHNSWVP LDE
Sbjct: 822  LSDLPCGFSEELTKFHFQPDHFNCAQFRGRKAAFLTKVDADYGHNGMIYPHNSWVPPLDE 881

Query: 2726 IIKICDQGDEFNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKERTS 2905
            II++C+QG +FNCALINFY+ +SSLGFH+DNE+VYNDDPILTVCT GEGI++IE K++T 
Sbjct: 882  IIQLCNQGSDFNCALINFYEPNSSLGFHRDNEQVYNDDPILTVCTSGEGIIAIEFKDQTV 941

Query: 2906 SFIMTAGSFFLMPKGYQKRARHSVRNTSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLI 3085
            SF+MT G+FFLMPKG+QK+ARHSV N   RVS+TFRKH+RRL+GSPIAI+++NYRN CLI
Sbjct: 942  SFLMTTGTFFLMPKGFQKKARHSVSNKVSRVSITFRKHIRRLNGSPIAIKEENYRNTCLI 1001

Query: 3086 SALSNALNRDKQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKC 3265
             A S ++ R KQ IIA+L++ N PFWSR+LS+GNGG+IEDCQ+ACEAL + VDL VDG+C
Sbjct: 1002 DAFSKSMKRSKQAIIARLKAANSPFWSRYLSEGNGGTIEDCQSACEALDVTVDLNVDGRC 1061

Query: 3266 IVMGEGGLRISLALQNNHFSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDICA-G 3442
            +V+G G LRI++AL+ NHFS ++  + M+RTFVSHL+ KGN+NVLEGL  ML  ++ A G
Sbjct: 1062 LVLGRGALRITMALKENHFSVIQAAQLMERTFVSHLSMKGNINVLEGLHEMLDSNVGATG 1121

Query: 3443 VNYIQFAADYENARTLANSFLNMTTGICLGRVLDGGEKYFTHMLEERPKQIGFDVTAICG 3622
            VN IQF A++E ARTLANSFLNMTTGICLGR LD GEKYF H+L ++ +QIGF+VT +CG
Sbjct: 1122 VNKIQFTANFEYARTLANSFLNMTTGICLGRALDNGEKYFRHILTDQVRQIGFEVTMVCG 1181

Query: 3623 FAGSGKSRQLQSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDK 3802
            FAGSGKSRQLQSWLHSRKKGNFCVVSPR NLAADWSFKLELEPNE+RKV+TFE FIK DK
Sbjct: 1182 FAGSGKSRQLQSWLHSRKKGNFCVVSPRTNLAADWSFKLELEPNEQRKVSTFEKFIKTDK 1241

Query: 3803 CKLDLIILDELTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHD 3982
             KLDLI++DELTLFPNGYLDLLVYEL   N +C+++LLFDPLQARYHN+MDE IL FEHD
Sbjct: 1242 SKLDLIVIDELTLFPNGYLDLLVYELTNVNRYCQIVLLFDPLQARYHNKMDESILTFEHD 1301

Query: 3983 TDRLIGGQDIQYIYSSHRMSRFFNRFFDVPCFNQAETTAEQKLWIFDDIYSIMSICIDRD 4162
             DRLIGGQ+I YIYS+HRMS++FNRFFDVPCFNQA    EQKLWIFDD+YSI SIC+DR 
Sbjct: 1302 VDRLIGGQNINYIYSTHRMSKYFNRFFDVPCFNQANRVEEQKLWIFDDVYSIPSICLDRQ 1361

Query: 4163 EPCDVLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRA 4342
            EPCDVLLVESDLEKKAFSPI+NVMTFGESQGLTFNH CI            RWMVA+TR+
Sbjct: 1362 EPCDVLLVESDLEKKAFSPIMNVMTFGESQGLTFNHACILLSESSAASNEFRWMVAITRS 1421

Query: 4343 KTRISFCSTFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDE 4522
            + R S CSTFLGGI+EFKVR+ ESL+TSILQ E ITF RLN+M+KCNL+RNEKKNGCSDE
Sbjct: 1422 RNRFSLCSTFLGGIEEFKVRRKESLITSILQGEKITFARLNLMLKCNLIRNEKKNGCSDE 1481

Query: 4523 VDREERLEGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFI 4702
            VDREERLEGDPFLKPFIFLGQRI+             P CQTHLYITEPNFGLCYNFDFI
Sbjct: 1482 VDREERLEGDPFLKPFIFLGQRIETHEEKKDEIEVREPTCQTHLYITEPNFGLCYNFDFI 1541

Query: 4703 REKEQREYRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRK 4882
            REKEQREYRE+MLVTNQFCDSYDK HINGKRETPGP+RFKAIYPKHSADDDMTFWMAVRK
Sbjct: 1542 REKEQREYREDMLVTNQFCDSYDKVHINGKRETPGPLRFKAIYPKHSADDDMTFWMAVRK 1601

Query: 4883 RLVFREEEENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCG 5062
            RLVFREEEENYQRLS+AHLVGGLLY NFK+KMGLEFSFDQ LLEES+NAFEKKKLEKSCG
Sbjct: 1602 RLVFREEEENYQRLSRAHLVGGLLYANFKKKMGLEFSFDQGLLEESINAFEKKKLEKSCG 1661

Query: 5063 TIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRY 5242
            TIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRY
Sbjct: 1662 TIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRY 1721

Query: 5243 LETQIRNQLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHL 5422
            LE QIR+QLPEEIYIHSNKNFDDLN WVKKFFQRDICVESDYEAFDASQDEYILSFE+HL
Sbjct: 1722 LEAQIRSQLPEEIYIHSNKNFDDLNNWVKKFFQRDICVESDYEAFDASQDEYILSFEIHL 1781

Query: 5423 MKDAHFPQKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRG 5602
            MKDA FPQ +IDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFT+CRYEWRRG
Sbjct: 1782 MKDAKFPQAIIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTMCRYEWRRG 1841

Query: 5603 QPIAFAGDDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELV 5782
            QPIAFAGDDMCALNNL + HDFDDLFEL+SLKAKVERTE+PMFCGWRLTPYGIVKEPELV
Sbjct: 1842 QPIAFAGDDMCALNNLAVCHDFDDLFELISLKAKVERTETPMFCGWRLTPYGIVKEPELV 1901

Query: 5783 YNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDK 5962
            YNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDK
Sbjct: 1902 YNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDK 1961

Query: 5963 LKTKVRDLYIEQSSDEDI 6016
            LKTKVRDL++EQSSDEDI
Sbjct: 1962 LKTKVRDLFLEQSSDEDI 1979


>gb|AFA43556.1| replicase polyprotein, partial [Citrus leaf blotch virus]
          Length = 614

 Score = 1137 bits (2941), Expect = 0.0
 Identities = 551/614 (89%), Positives = 576/614 (93%)
 Frame = +2

Query: 4175 VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRI 4354
            VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCI            RWMVALTRAKTR 
Sbjct: 1    VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRAKTRF 60

Query: 4355 SFCSTFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDRE 4534
            SFCST LGGID+FK++KGESLVTSILQ E ITF+RLNMMVKCNL++ EKKNGCSDEVDRE
Sbjct: 61   SFCSTCLGGIDDFKIKKGESLVTSILQGEKITFERLNMMVKCNLIKQEKKNGCSDEVDRE 120

Query: 4535 ERLEGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKE 4714
            ERLEGDPFLKPFIFLGQRI K            PRCQTHLYITEPNFGLCYNFDFIREKE
Sbjct: 121  ERLEGDPFLKPFIFLGQRIPKDQEKIEEVEIEEPRCQTHLYITEPNFGLCYNFDFIREKE 180

Query: 4715 QREYRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVF 4894
            QREYRE+MLVTNQFCDSYDK HINGKRETPGPMRFKAIYPKHSADDDMTFWMAV+KRL+F
Sbjct: 181  QREYREDMLVTNQFCDSYDKVHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVKKRLIF 240

Query: 4895 REEEENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKS 5074
            REEEENYQRLS+AHLVGGLLY+NFK K+GLEF+FDQ LLE+S+NAFE+KKLEKS GTIKS
Sbjct: 241  REEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLLEDSINAFERKKLEKSRGTIKS 300

Query: 5075 HSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQ 5254
            HSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQ
Sbjct: 301  HSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQ 360

Query: 5255 IRNQLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDA 5434
            IRNQLPEEIY+HSNKNFDDLN+WVKKFFQRDI VESDYEAFDASQDEYILSFE+HLMKDA
Sbjct: 361  IRNQLPEEIYVHSNKNFDDLNQWVKKFFQRDIFVESDYEAFDASQDEYILSFEIHLMKDA 420

Query: 5435 HFPQKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIA 5614
            +FPQ VIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIA
Sbjct: 421  NFPQTVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIA 480

Query: 5615 FAGDDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRF 5794
            FAGDDMCALNNLP+ H FDDLFEL+SLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRF
Sbjct: 481  FAGDDMCALNNLPVCHAFDDLFELMSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRF 540

Query: 5795 QVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTK 5974
            QVAIEEGKV+ECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTK
Sbjct: 541  QVAIEEGKVMECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTK 600

Query: 5975 VRDLYIEQSSDEDI 6016
            VRDL++EQSSDEDI
Sbjct: 601  VRDLFLEQSSDEDI 614


>gb|AFA43558.1| replicase polyprotein, partial [Citrus leaf blotch virus]
          Length = 614

 Score = 1133 bits (2931), Expect = 0.0
 Identities = 549/614 (89%), Positives = 575/614 (93%)
 Frame = +2

Query: 4175 VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRI 4354
            VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCI            RWMVALTRAKTR 
Sbjct: 1    VLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCILLSESSAASNEFRWMVALTRAKTRF 60

Query: 4355 SFCSTFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDRE 4534
            SFCST LGGID+FK++KGESLVTSILQ E ITF+RLNMMVKCNL++ EKKNGCSDEVDRE
Sbjct: 61   SFCSTCLGGIDDFKIKKGESLVTSILQGEKITFERLNMMVKCNLIKQEKKNGCSDEVDRE 120

Query: 4535 ERLEGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKE 4714
            ERLEGDPFLKPFIFLGQRI K            PRCQTHLYITEPNFGLCYNFDFIREKE
Sbjct: 121  ERLEGDPFLKPFIFLGQRIPKDQEKIEEVEIEEPRCQTHLYITEPNFGLCYNFDFIREKE 180

Query: 4715 QREYRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVF 4894
            QREYRE+MLVTNQFCDSYDK HINGKRETPGPMRFKAIYPKHSADDDMTFWMAV+KRL+F
Sbjct: 181  QREYREDMLVTNQFCDSYDKVHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVKKRLIF 240

Query: 4895 REEEENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKS 5074
            REEEENYQRLS+AHLVGGLLY+NFK K+GLEF+FDQ LLE+S+NAFE+KKLEKS GTI+S
Sbjct: 241  REEEENYQRLSRAHLVGGLLYRNFKNKLGLEFTFDQGLLEDSINAFERKKLEKSRGTIRS 300

Query: 5075 HSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQ 5254
            HSIRSDIDWALNDVFLFMKSQL TKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQ
Sbjct: 301  HSIRSDIDWALNDVFLFMKSQLFTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQ 360

Query: 5255 IRNQLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDA 5434
            IRNQLPEEIY+HSNKNFDDLN+WVKKFFQRDICVESDYEAFDASQDEYILSFE+HLMKDA
Sbjct: 361  IRNQLPEEIYVHSNKNFDDLNQWVKKFFQRDICVESDYEAFDASQDEYILSFEIHLMKDA 420

Query: 5435 HFPQKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIA 5614
            +FPQ VIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIA
Sbjct: 421  NFPQTVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIA 480

Query: 5615 FAGDDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRF 5794
            FAGDDMCALNNLP+ H FDDLFEL+SLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRF
Sbjct: 481  FAGDDMCALNNLPVCHAFDDLFELMSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRF 540

Query: 5795 QVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTK 5974
            QVAIEEGKV+ECLENYAIEVSYAYSLSE LYEVLKSERQIQYHQAVVRFIVTHIDKLKTK
Sbjct: 541  QVAIEEGKVMECLENYAIEVSYAYSLSEGLYEVLKSERQIQYHQAVVRFIVTHIDKLKTK 600

Query: 5975 VRDLYIEQSSDEDI 6016
            VRDL++EQSSDEDI
Sbjct: 601  VRDLFLEQSSDEDI 614


>gb|AUZ97243.1| replicase [Actinidia seed-borne latent virus]
          Length = 2002

 Score =  997 bits (2578), Expect = 0.0
 Identities = 569/1318 (43%), Positives = 783/1318 (59%), Gaps = 53/1318 (4%)
 Frame = +2

Query: 2204 DGNCFFSAFLTAFECPDSEDLRTDFANWLAFFDGGNFR---ELGLKIRPDGVYMEAELIY 2374
            DGNCF+ A        + E   T      +      FR   ++  ++  DGVY   EL+ 
Sbjct: 701  DGNCFYRALRLCLGHGEHEYNVTREKLHKSALSSTFFRLEDDILHELITDGVYTSDELVK 760

Query: 2375 LFCVFREVTLVLHDRS--------------CETEKVFVIHAGFEEGHIVQKGEHFLGIET 2512
                   + L +  ++               E E V V+H   E  H     +  L    
Sbjct: 761  FIVNLANIELRISTQNQLNHFSSYKPLIAKYENEPVCVVHMHLENEHF----DAVLYAHD 816

Query: 2513 YIVNTSLPEPDLSDLPCGYDERLTKFLFRPEHFNCSQFRGRKGAF-LTKVDADYGHNGMV 2689
                    E  + +L  G  E L K  F  +++  ++ +GRK  F +  +D DYGH+ + 
Sbjct: 817  EDGYDQEEEGGVIELKRGNFEDLEKLNF--QNYKPTKLKGRKAFFFVNNLDIDYGHDKVR 874

Query: 2690 YPHNSWVPSLDEIIKIC--DQGDEFNCALINFYDSDSSLGFHKDNEKVYNDDPILTVCTE 2863
            Y  N     L +I  IC  D  + +N  L+  ++   ++  H+D+E  Y+D+ IL++  +
Sbjct: 875  YKSN-----LYDIESICPKDLYNGYNACLVQIFEEGGNIPMHRDDEICYDDESILSINLK 929

Query: 2864 GEGILSIELKERTSSFIMTAGSFFLMPKGYQKRARHSVRN-TSPRVSVTFRKHVRRLDGS 3040
            G    S      T    M   S+ +M   +QK+ +HSV+N +S R++VTFR+H+RR++  
Sbjct: 930  GSATFSYSDGNVTKDIRMMESSYIVMDGPFQKKFKHSVKNCSSGRINVTFRRHIRRMNME 989

Query: 3041 PIA-IRKD--NYRNICLISALSNALNRDKQVIIAKLRSVNGPFWSRFLSDGNGGSIEDCQ 3211
            P+  I K+    +N C+I A+++   R   V++  L   +  FW  +  + NGG+I D  
Sbjct: 990  PLVDINKEIKAMKNRCMIDAIADNEGRSIPVVMNALLKKDRIFWDEWRKNDNGGTISDLI 1049

Query: 3212 AACEALGIVVDL-YVDGKCIVMGEGGLRISLALQNNHFSAVEGHRSMQRTFVSHLAKKGN 3388
             A   L    ++  +DG   +  +G L  +  L++ HF   +  +  +   ++ L ++  
Sbjct: 1050 KAANDLAFSFEVDTMDGVKTLNNKGPL-FTFELKDGHFRKSKIEKIGK--VMTELERREM 1106

Query: 3389 LNVLEGLDAMLQKDICA---GVNYIQFAADYENARTLANSFLNMTTGICLGRVLDGGEKY 3559
                EG       ++ +   G N + F  D E    + +SF N  TGI L  +   GE  
Sbjct: 1107 KRETEGSFGDKVVELVSNSPGFNKLTFEVDVEYVMKIVHSFKNRMTGIALSDIYSNGESI 1166

Query: 3560 FTHMLEE-----------RPKQIG----------FDVTAICGFAGSGKSRQLQSWLHSRK 3676
            F  ++EE           + K+ G           ++  + G  GSGKS  LQS+L    
Sbjct: 1167 FGEVIEEISRINKSSCSDKKKKDGSYESEHMTRKIELNCVIGLGGSGKSNSLQSFLKKNV 1226

Query: 3677 KGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIILDELTLFPNGY 3856
            KG F V+SPR NLA+DW  K+   PN   KV TFE+ ++ +   +++II+DELTLFPNGY
Sbjct: 1227 KGKFLVISPRLNLASDWISKVGCNPN---KVRTFETALRTNLKSIEVIIVDELTLFPNGY 1283

Query: 3857 LDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGGQDIQYIYSSHR 4036
            LDLL+  L +     K++ +FD  Q+RYH+  D  IL   HD DR++  ++I Y++ S+R
Sbjct: 1284 LDLLMCMLGKEVKRKKIVCIFDIYQSRYHSESDTNILGQVHDVDRIVKNKEISYLHQSYR 1343

Query: 4037 -MSRFFNRFF-DVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDVLLVESDLEKKA 4210
             +S FF+ FF DV    + E   E +  ++D       I  ++    D +LV S  EK A
Sbjct: 1344 FISNFFDSFFKDVTINKKVEEKFEVR--VYDCHLKAQIIEEEKGRKIDAILVASRDEKNA 1401

Query: 4211 FSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTFLGGIDE 4390
             S  + VMTFGESQGL+FN V I            RWMVALTRA+  I F   + GG+  
Sbjct: 1402 LSGKVEVMTFGESQGLSFNRVAIVLSENSEKQDEYRWMVALTRARISICFIVIYRGGLSV 1461

Query: 4391 FKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKK--NGCSDEVDREERLEGDPFLK 4564
            F    G  L+ + ++ +  +  RL MM     +  +K+   G SDEVDREERLEGDPFLK
Sbjct: 1462 FLQNCGNKLIGAFIKGQECSLRRLRMMSVAKEITFKKEMIGGKSDEVDREERLEGDPFLK 1521

Query: 4565 PFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRENMLV 4744
            PFIFLG RI              P+ ++H+ I + NF L  NFD IR KE REYR     
Sbjct: 1522 PFIFLGMRINSEEPEMCEVEIVEPKGKSHICIAQENFALSRNFDLIRSKELREYRFREST 1581

Query: 4745 TNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEENYQRL 4924
            TNQFCD+Y++      + T GP+RF++IYP+H ++DD+TFWMAV KRL F  E +   +L
Sbjct: 1582 TNQFCDNYERVGTGASKHTAGPLRFESIYPRHQSNDDLTFWMAVHKRLKFSNEAKERAKL 1641

Query: 4925 SKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSDIDWA 5104
             ++ +VG LLY N K+K+ L FS D  LL + +N FE KKL KS  TI +HSIRSD+DW 
Sbjct: 1642 KESSMVGQLLYYNLKEKLNLSFSHDPGLLSQCINDFEVKKLSKSKATIANHSIRSDMDWP 1701

Query: 5105 LNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLPEEIY 5284
            +N +FLFMKSQLCTKYEKQ+ DAKAGQTLACFQH++LV+FAP+CRY+E  IR++LP+EIY
Sbjct: 1702 MNQIFLFMKSQLCTKYEKQYCDAKAGQTLACFQHMVLVKFAPYCRYMEAMIRSRLPDEIY 1761

Query: 5285 IHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKVIDAY 5464
            IHSNKNF++LN WV K F+ + CVESDYEAFDASQDEYI+SFE+ +M+D   P   I+ Y
Sbjct: 1762 IHSNKNFNELNDWVVKHFKGETCVESDYEAFDASQDEYIVSFEIAMMEDMGMPNWFINDY 1821

Query: 5465 IDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDMCALN 5644
            IDLKC LGCKLGHF+IMRFTGEFCTFLFNTLANMAFT CRY+WR+GQPIAFAGDDMC+L+
Sbjct: 1822 IDLKCTLGCKLGHFAIMRFTGEFCTFLFNTLANMAFTFCRYDWRKGQPIAFAGDDMCSLS 1881

Query: 5645 NLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEEGKVL 5824
            NL + + FD +FE LSL+AKV RTE+PMFCGWRL+ YGIVKEPELV+NRF +A E G V 
Sbjct: 1882 NLEVSNKFDSIFEKLSLQAKVIRTETPMFCGWRLSKYGIVKEPELVFNRFMIAKERGNVD 1941

Query: 5825 ECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYIEQ 5998
            ECLENYAIEVSYAYSL ERL+EVLKSE QI+YHQ VVRFI+  ++K+KTKV+DL+ +Q
Sbjct: 1942 ECLENYAIEVSYAYSLGERLFEVLKSEEQIEYHQCVVRFIIQRLEKIKTKVKDLFSDQ 1999



 Score =  335 bits (860), Expect = 1e-88
 Identities = 174/441 (39%), Positives = 264/441 (59%), Gaps = 5/441 (1%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MA ++ +T  ES      K     + N+  + +    +    HFAY L+S +K+  + +G
Sbjct: 1    MASIAVRTPYESFFAANSKDDQRLLLNSGLEFVKRELDAVGVHFAYQLSSQKKEALTSMG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRRV 421
            + L+P  ++ HSHP  K  ENH+L ++LP ++   K I  SIK             KR++
Sbjct: 61   VSLHPVPFLSHSHPFCKTVENHMLLNVLPDLMGNGKWIFSSIK-------------KRKI 107

Query: 422  FNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAF-FSSNGSGSE-LFSNNFIKSISGK 595
              +  +  +   +  F+N++I +KD +RY  +       +N S  E +F N++I++    
Sbjct: 108  DTITKKRGVQASNVDFVNKVICAKDFTRYDFDPKVHDVRTNMSSREFIFPNSYIRACHNN 167

Query: 596  EAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVD--K 769
            + +F HDE+HHW+   M  FL  +  +  I +VVYPPELLR     QNP +Y F+VD  K
Sbjct: 168  K-IFIHDEIHHWSADDMIYFLNNSNPKMLICSVVYPPELLRGIKQPQNPSLYSFEVDEKK 226

Query: 770  GRLFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVT 949
             +LFFFPD  K+EAYEQ L ++WLF A+++ +G   +TV   KS Y+HH+F+++ GE VT
Sbjct: 227  QKLFFFPDNCKSEAYEQPLRLDWLFEAAYIDTGVKRYTVKLIKSAYSHHMFQITPGEYVT 286

Query: 950  DSKLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQI 1129
            +S+ FF+D+ +ID+S +  +RFR Y+  PI   HL KVYSYLLCLKKPD+ESGLAKLRQ+
Sbjct: 287  ESRRFFNDFDTIDLSIMHENRFRYYDYIPIKKTHLQKVYSYLLCLKKPDVESGLAKLRQM 346

Query: 1130 IGDDVEIKEFLFFEQFCKRLIER-QTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKK 1306
              DD + +   FF +FCK +IE+ +  W L+G S+     D  +  +P  +AR F +W+ 
Sbjct: 347  FDDDQDCRVVEFFSKFCKDIIEKHKNKWELYGFSWLETAKDSFIKSLPIQIARCFKRWEF 406

Query: 1307 KNTFEFLFSLGTLVVEIERRV 1369
            KN F+FLF+L TL V +  RV
Sbjct: 407  KNIFDFLFNLQTLSVSVNTRV 427


>gb|AKN08994.1| replicase [Caucasus prunus virus]
          Length = 1986

 Score =  991 bits (2563), Expect = 0.0
 Identities = 584/1328 (43%), Positives = 764/1328 (57%), Gaps = 62/1328 (4%)
 Frame = +2

Query: 2204 DGNCFFSAFLTAFE-----------------------CPDSEDLRT-----DFANWLAFF 2299
            DGNCF  A LT+ +                         DSE+ +       F  W+  F
Sbjct: 693  DGNCFMRALLTSIKGDDRTYPGSRSRLLNLSRQIGVNLTDSEEAQILREGEQFDEWMIMF 752

Query: 2300 DGGNFRELGLKIRPDGVYMEAELIYLFCVFREVTLVLHDRSCETEKVFVIHAGFEEGHIV 2479
               N   L LKI    V +   L            +++    + +++ ++H         
Sbjct: 753  TV-NVMNLSLKIFQGDVSIPRTLS---------PKLVNTHGNDAKEIAILH--------- 793

Query: 2480 QKGEHFLGIETYIVNTS--------LPEPDLSD------LPCGYD--ERLTKFLFRPEHF 2611
             +G HFLG+     + S         P    SD         G++  E L K +     F
Sbjct: 794  -RGNHFLGLLKKCTSESGAHDFDGNQPVEASSDNHFDETFETGFNDFEELRKVVGSISMF 852

Query: 2612 NCSQFRGRKGAFLTKVDA-DYGHNGMVYPHNSWVPSLDEIIKICDQGDEFNCALINFYDS 2788
              +  + R   F ++  + DYGHN + Y HN W   +D+++    + D +N  LI  Y  
Sbjct: 853  KKTPLKNRDAFFFSESKSIDYGHNRIKYAHNHW-NGVDQLLPSSLRND-YNAMLIQVYKE 910

Query: 2789 DSSLGFHKDNEKVYNDDPILTVCTEGEGILSIELKE-RTSSFIMTAGSFFLMPKGYQKRA 2965
              S+G H+DNEKVY++D IL++   G+ +  IE K  +  SF M  G +FLM + +Q + 
Sbjct: 911  GGSIGMHRDNEKVYDNDSILSINLNGDALFQIEAKSSKRYSFRMKDGDYFLMKRDFQAKF 970

Query: 2966 RHSVRN-TSPRVSVTFRKHVRRLDGSPIAIRKDNYRNICLISALSNALNRDKQVIIAKLR 3142
            RH V+  T  R++VTFRKHVR     PI +    ++NICL+ +LS    R    I+  L 
Sbjct: 971  RHGVQGATEGRINVTFRKHVRNSRNEPIYLGISKFKNICLMRSLSILEKRPLYDILLALI 1030

Query: 3143 SVNGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRISLALQNNHF 3322
              N  +W+ FL  G GG++ D   A E L    +LY++ K I  G  G    L L ++HF
Sbjct: 1031 KKNKNYWTSFLEFGVGGTLADLNQAAEDLSFRFELYMNEKWIAGGNRGPIYRLNLSDDHF 1090

Query: 3323 SAVEGHRSM-------QRTFVSHLAKKGNLNVLEGLDAMLQKDICAGVNYIQFAADYENA 3481
            S    HR +       Q  F    +K+ N +  +  D     D    VN   F    + A
Sbjct: 1091 SV---HRELSGNVEDTQLNFSKAKSKQSNFSSSDD-DNSFDLDSIEHVNKSLFEPLNDAA 1146

Query: 3482 RTLANSFLNMTTGICLGRVLDGGEKYFTHML-----EERPKQIGFDVTAICGFAGSGKSR 3646
              L  SFLN TTG  L         +   +      +  P+++ F     CGFAGSGKS 
Sbjct: 1147 ELLRQSFLNRTTGKILSDAFGENGAHLRRIRIVKSDDPFPEEVYFS----CGFAGSGKSL 1202

Query: 3647 QLQSWLHSRKKGNFCVVSPRANLAADWSFKLELEPNEKRKVATFESFIKMDKCKLDLIIL 3826
             LQS L S  K  F V+ PR  L  DW  K++   +   KV TFE  +  +  +++LI++
Sbjct: 1203 SLQSKLKSNFKLKFLVICPRVELKEDWERKVKCSSH---KVCTFEVALLQNLSRVELIVI 1259

Query: 3827 DELTLFPNGYLDLLVYELH-EFNAHCKVILLFDPLQARYHNRMDELILKFEHDTDRLIGG 4003
            DEL LFP GYLDL++++L  E N   KV+LLFDPLQARYH+  DE  L   H+ DR+  G
Sbjct: 1260 DELGLFPRGYLDLMIFKLRTEKNFKGKVMLLFDPLQARYHSDSDERFLHEIHECDRITSG 1319

Query: 4004 QDIQYIYSSHRMSR-FFNRFF-DVPCFNQAETTAEQKLWIFDDIYSIMSICIDRDEPCDV 4177
              I Y++ S R+S+ FF  FF D+   N      E  L  FD+     +    R  P D+
Sbjct: 1320 AKINYLFESWRLSKKFFGNFFVDIELRNSGSVNYE--LDFFDNHIVAANEAKKRGFPIDL 1377

Query: 4178 LLVESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRIS 4357
            +LV S  EK +F+  +NV+TFGE+QGLT  H CI            RW+VALTRAK +IS
Sbjct: 1378 ILVASRDEKNSFAGKVNVLTFGEAQGLTVKHSCIVLSEYAEKQDDYRWVVALTRAKEKIS 1437

Query: 4358 FCSTFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMVKCNLVRNEKKNGCSDEVDREE 4537
            F ++   G+  F        + + L     T +R+N MV C LV   +  G  DEVDRE+
Sbjct: 1438 FITSHRSGLTGFMSSMIGRPIHAFLTGLPFTSNRMNWMVNCELVECHRATGGRDEVDRED 1497

Query: 4538 RLEGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQ 4717
            RLEGDPFLKPF+FLGQRI              P+ + HL I++ N+ L  NFD IR KE 
Sbjct: 1498 RLEGDPFLKPFVFLGQRINSEEYEIIEPEVIEPKGRVHLCISQENYALARNFDLIRAKEY 1557

Query: 4718 REYRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFR 4897
            RE +   L TNQFC  Y++    G R    P+RF++I+P+H +DDD+TFWMAV+KRL F 
Sbjct: 1558 REAKLMGLETNQFCHDYNRVGAQGSRHVASPLRFESIFPRHRSDDDLTFWMAVKKRLRFS 1617

Query: 4898 EEEENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSH 5077
            EE     +L  ++ VG LLYQN K+K+ L FS+DQ LL+E +N FE KKL KS  T+ +H
Sbjct: 1618 EEFLERAKLKDSYSVGNLLYQNLKEKLSLSFSWDQGLLDECLNDFETKKLLKSKATLANH 1677

Query: 5078 SIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQI 5257
            SIRSDIDW+++ +FLFMKSQLCTKYEKQ+VDAKAGQTLACF HL+L +FAP+CRY+E  +
Sbjct: 1678 SIRSDIDWSMDKIFLFMKSQLCTKYEKQYVDAKAGQTLACFSHLVLAKFAPYCRYMEKML 1737

Query: 5258 RNQLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAH 5437
            R  L EEIYIHSNKNF+DLN WV KFF+    VESDYEAFDASQD Y+L+FEV +M+D  
Sbjct: 1738 RRNLKEEIYIHSNKNFNDLNDWVVKFFEEGEKVESDYEAFDASQDHYVLAFEVCVMEDMG 1797

Query: 5438 FPQKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAF 5617
             P   I+ YIDLKC LGCKLGHF+IMRFTGEF TFLFNTLANMAFT  RYE     PIAF
Sbjct: 1798 LPNWFINDYIDLKCTLGCKLGHFAIMRFTGEFSTFLFNTLANMAFTFARYECDHKTPIAF 1857

Query: 5618 AGDDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQ 5797
            AGDDMC L    +   F+D+   LSLKAKV RTE PMFCGW L+ YGIVKEPELV+NRF 
Sbjct: 1858 AGDDMCMLKACKVSDKFEDVLSKLSLKAKVIRTEMPMFCGWNLSRYGIVKEPELVFNRFM 1917

Query: 5798 VAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKV 5977
            VA + G + ECLENYAIEVSYAYSL E+LYEVLK E Q++YHQAVVRFIV  +DKLKTKV
Sbjct: 1918 VAKKRGNIDECLENYAIEVSYAYSLGEKLYEVLKREEQVEYHQAVVRFIVQRLDKLKTKV 1977

Query: 5978 RDLYIEQS 6001
            +DL+ +Q+
Sbjct: 1978 KDLFSDQN 1985



 Score =  321 bits (822), Expect = 4e-84
 Identities = 169/439 (38%), Positives = 255/439 (58%), Gaps = 3/439 (0%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVG 241
            MA ++ +T +E      DK    +I  +    +    + +  HFAY +N  +K+  + +G
Sbjct: 1    MASVTVRTPMEKFFAANDKNDQRSILTSGVNFVKKFCDDKGIHFAYYVNDRKKEALTNLG 60

Query: 242  IELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRRV 421
            + L+P  ++ HSHP  K  ENH+L ++LP+++     +  S+K++KV            V
Sbjct: 61   VTLHPIPFLTHSHPFCKTLENHLLINVLPNLLGNGHWVFTSVKKAKV----------NSV 110

Query: 422  FNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFFSSNG--SGSELFSNNFIKSISGK 595
              L   +  V ++   +NR I +KD  RY  E  +        S   LF  NFI+S+  K
Sbjct: 111  IKL---AGGVSNNVDIVNRCICAKDFGRYDFEPGSVDQKINILSKDHLFPKNFIRSVR-K 166

Query: 596  EAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKGR 775
            + +F HDEVHHW+   M  FL+ T     + +VV+PPELL      QN  +Y F+VD  +
Sbjct: 167  KKIFIHDEVHHWSHLNMIQFLEETATPLLLCSVVFPPELLGGIKTPQNSALYGFQVDGDK 226

Query: 776  LFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDS 955
            LFFFPDG ++E YEQ  N+ WLF AS++ +   T+TV    S YAHHLF++S GE +TDS
Sbjct: 227  LFFFPDGSRSEMYEQPSNLNWLFEASYIHTSAGTYTVKMVGSFYAHHLFQISKGEKITDS 286

Query: 956  KLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIG 1135
              FF+D+ +IDMS I  +RF+ Y++ PI   H+ K+Y+YLLCLKKPD+ES +AKLRQ++ 
Sbjct: 287  VRFFADFNTIDMSVIHKERFKYYDLIPIKKSHIEKIYTYLLCLKKPDVESAIAKLRQLME 346

Query: 1136 DDVEIKEFLFFEQFCKRLI-ERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKN 1312
            D+ + +   FF  F K+LI + + +  LFG SF  K  D  +  +PN +A  F +W   N
Sbjct: 347  DEQDCRVVEFFCTFAKKLITDTKGAINLFGDSFLQKAKDSFIMALPNSIASCFDRWHGLN 406

Query: 1313 TFEFLFSLGTLVVEIERRV 1369
             F FLF+L T+ V++E +V
Sbjct: 407  IFHFLFTLDTIRVKVETKV 425


>gb|AQQ73540.1| replicase [Apricot vein clearing associated virus]
          Length = 2022

 Score =  976 bits (2523), Expect = 0.0
 Identities = 581/1359 (42%), Positives = 783/1359 (57%), Gaps = 68/1359 (5%)
 Frame = +2

Query: 2141 KDIFRPYDCPNTHG--KEIPTPMDGNCFFSAFL-TAFECPDSEDLRTDFANWLAFFDGGN 2311
            ++ +RP  C       + I    DG CFF   L T+       +L   F N++   D   
Sbjct: 697  ENTYRPVTCSKIGNSFQIIQASADGRCFFHTLLSTSLFRGSVNNLVNTFCNFIKNLDE-- 754

Query: 2312 FRELGLKIRPDGVYMEAELIYLFCVFREVTLVLHDRSCETEKVFVIHAGFEEGHIVQKGE 2491
              E   +++ +G Y E  +I LF     + +  H  S +   +    +G      ++   
Sbjct: 755  -HEAARQVQ-EGAYPEGWMINLFLANYGIRMCCHQHSADGVTIET-GSGPISFCSLKMEN 811

Query: 2492 HFLGIETYIVNTSLPEPDL---SDLPCGYDERLTKFLFRPEHFNCSQFRGRKGAFLTKV- 2659
            HF  +       S     L   +  P G        +   +      FRGR   F  +  
Sbjct: 812  HFDYLRCLSSGVSKEHTGLLGKTTYPSG------PIINALQGLKPKSFRGRSSFFFARSN 865

Query: 2660 DADYGHNGMVYPHNSWVPSLDEIIKICDQGDEFNCALINFYDSDSSLGFHKDNEKVYNDD 2839
            + DYGHNG  Y   +W   LD+ I        FN  L+  YD  S +GFHKDNE+ Y   
Sbjct: 866  EIDYGHNGFKYRTENWFAELDDFIP---SDLIFNACLVQVYDKGSKIGFHKDNEQCYAGY 922

Query: 2840 PILTVCTEGEGILSIELKERTSSFIMTAGSFFLMPKGYQKRARHSVRNTSP-RVSVTFRK 3016
            PILTV     G+   E  +   +F +T G   L+   Y K+ RH V + S  R+S+TFR+
Sbjct: 923  PILTV---NFGLALFEF-DSGEAFNLTDGDTILLSGDYLKKKRHRVTSLSDNRISLTFRR 978

Query: 3017 HVRRLDGSPIAIRKDNYR---NICLISALSNALNRDKQVIIAKLRSVNGPFWSRFLSDGN 3187
            HV R++ SP+    ++ +   N C+I A++ AL +    +  K+ +         + D  
Sbjct: 979  HVCRMNKSPLEFFSNDGKLGKNKCIIHAVAMALGQTSNTVANKIVAQRPDLLQCLVDD-- 1036

Query: 3188 GGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRISL---ALQNNHFSAVEGHRSMQRT 3358
               + D Q   E + ++++L+     IV  + G  + L    L  + FS ++ H  +   
Sbjct: 1037 --EMLDKQTT-ETICVIMNLHAT---IVNEDEGETMELNPEGLIKSSFSVLDEHMMV--- 1087

Query: 3359 FVSHLAKKGNLNVLEGLDAMLQKDI------------CAGVNYIQFAADYENARTLANSF 3502
                L+   N    +G+D  +  D+            C  +  IQ+ AD+E A  L NSF
Sbjct: 1088 ----LSDVPNCRSKKGIDICMSPDLANSNCAANYEVTCQNLQVIQYQADHERAIKLMNSF 1143

Query: 3503 LNMTTGICLGRVLDGGEKYFTHM--LEERPKQIGFDVTAICGFAGSGKS-------RQLQ 3655
            L  TTG  L  ++  G ++FT M  + ER      +++ + GFAGSGKS       +++ 
Sbjct: 1144 LAGTTGAVLNELVFKGSRFFTFMDSVNERKSDFVEELSFVPGFAGSGKSLGLLNEVKRIS 1203

Query: 3656 SWLHSRK------KGN----------------FCVVSPRANLAADWSFKLELEPNEKRKV 3769
              +H  K      KGN                 C++SPR NLA DW  KL     E   V
Sbjct: 1204 REVHLAKEKKRMGKGNGKGHEKKERNRGNLKSMCIISPRRNLADDWETKLGPSALEHCSV 1263

Query: 3770 ATFESFIKMDKCKLDLIILDELTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNR 3949
             TFE F K    K+ LI++DELTLFPNGY+DLL++ +   + +CK+IL+FDPLQARY + 
Sbjct: 1264 TTFEIFFKASISKIKLIVVDELTLFPNGYIDLLIFRIRTESPNCKLILIFDPLQARYDSA 1323

Query: 3950 MDELILKFEHDTDRLIGGQDIQYIYSSHRMS--RFFNRFFDVPCFNQAETTAEQ------ 4105
             D  IL  EHD D ++G  ++ Y+Y S R      FN F D+   N+ +  + +      
Sbjct: 1324 QDRAILGSEHDVDLILGDSEVDYMYQSKRFESEELFNLFEDLKKKNEVDAESREMGKGAK 1383

Query: 4106 -KLWIFDDIYSIMSICIDRDEPCDVLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCIX 4282
             +  ++ ++ ++     ++  P DVLLV S  E   F+  I  MTFGESQGLT +H  I 
Sbjct: 1384 FRPRMYTNLLTMKVEEENQGNPIDVLLVGSFDEAGLFASSIKTMTFGESQGLTVDHAAIL 1443

Query: 4283 XXXXXXXXXXXRWMVALTRAKTRISFCSTFLGGIDEFKVRKGESLVTSILQSEMITFDRL 4462
                       RW+VALTRA+ +++F    L G++ F       LV +++   ++T  RL
Sbjct: 1444 LSENSALSDDHRWLVALTRARKKVTFLCLHLSGLNGFLSTMENRLVAAVINKGLVTKKRL 1503

Query: 4463 NMMV--KCNLVRNEKKNGCSDEVDREERLEGDPFLKPFIFLGQRIKKRXXXXXXXXXXXP 4636
            + MV  K N V+ +   G  DEVDRE+RLEGD FLK  IFLGQR +              
Sbjct: 1504 SSMVRAKLNYVKFKGLAG-KDEVDREDRLEGDLFLKGVIFLGQRCEIMEPEIVEPVMAKE 1562

Query: 4637 RCQTHLYITEPNFGLCYNFDFIREKEQREYRENMLVTNQFCDSYDKAHINGKRETPGPMR 4816
              +TH ++ + NF  CYNFD IR KE RE+R    VTNQF D+Y+      K+ T GP+R
Sbjct: 1563 DMKTHFFVCQENFAQCYNFDNIRAKELREFRIGYRVTNQFIDNYEIVQHGQKKHTAGPLR 1622

Query: 4817 FKAIYPKHSADDDMTFWMAVRKRLVFREEEENYQRLSKAHLVGGLLYQNFKQKMGLEFSF 4996
            F+AIYP+H ADDD+TF MAV KRL F  E +  ++L +AH  G +L+ N  QK+GL F++
Sbjct: 1623 FEAIYPRHCADDDVTFLMAVHKRLRFSNEMKEREKLERAHGTGSILFHNLIQKLGLNFTW 1682

Query: 4997 DQSLLEESVNAFEKKKLEKSCGTIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAK 5176
            D  L EE VN FE KKLEKS   + +HSIRSD DW+ N VFLFMKSQLCTKYEKQ+VDAK
Sbjct: 1683 DNQLFEECVNDFECKKLEKSKAVLANHSIRSDNDWSPNWVFLFMKSQLCTKYEKQYVDAK 1742

Query: 5177 AGQTLACFQHLILVQFAPWCRYLETQIRNQLPEEIYIHSNKNFDDLNKWVKKFFQRDICV 5356
            AGQTLACFQH+ILV FAP+CRY+E Q+R QLP EIYIHSNKNF+DLN+WVKK+   D+CV
Sbjct: 1743 AGQTLACFQHMILVTFAPYCRYMEKQLRAQLPGEIYIHSNKNFNDLNEWVKKYAGDDLCV 1802

Query: 5357 ESDYEAFDASQDEYILSFEVHLMKDAHFPQKVIDAYIDLKCKLGCKLGHFSIMRFTGEFC 5536
            ESDYEAFDASQD+YILSFE+ +M+  H P+++I AYIDLK  LGCKLGHF+IMRFTGEF 
Sbjct: 1803 ESDYEAFDASQDQYILSFELFMMRHMHIPEQIIQAYIDLKVNLGCKLGHFAIMRFTGEFS 1862

Query: 5537 TFLFNTLANMAFTLCRYEWRRGQPIAFAGDDMCALNNLPLRHDFDDLFELLSLKAKVERT 5716
            TFLFNTLANMAFT+CRYEW  G PIAFAGDDMCAL NL +   F+++FE +SLKAK + T
Sbjct: 1863 TFLFNTLANMAFTMCRYEWNSGDPIAFAGDDMCALKNLKVTDQFNNVFEKISLKAKTQIT 1922

Query: 5717 ESPMFCGWRLTPYGIVKEPELVYNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVL 5896
            E PMFCGWRL+ +GIVKEPELVYNRF VA+E G V +CLENYAIEVSYAYSL ERL+++L
Sbjct: 1923 EVPMFCGWRLSKFGIVKEPELVYNRFMVALERGNVKDCLENYAIEVSYAYSLGERLFDIL 1982

Query: 5897 KSERQIQYHQAVVRFIVTHIDKLKTKVRDLYIEQSSDED 6013
            K E Q++YHQAVVRFIV H+  L+TKV+DL+ EQ SDED
Sbjct: 1983 KREEQLEYHQAVVRFIVKHLGDLRTKVKDLFAEQ-SDED 2020



 Score =  303 bits (776), Expect = 1e-78
 Identities = 163/437 (37%), Positives = 245/437 (56%), Gaps = 3/437 (0%)
 Frame = +2

Query: 68   LMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVGIE 247
            +++ K+  E    N +      I ++A +++    +    HFAY +++  K+  S +G+ 
Sbjct: 4    ILNYKSPSEKFFSNLEMAKKTEIISSAYKSLKQQLDLNGGHFAYEVSASLKEKLSSLGVP 63

Query: 248  LYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKKRRVFN 427
            L+P  Y+ HSHP SK+ ENHIL ++LP  + T   +  SIK SKV   +++  K ++   
Sbjct: 64   LHPTPYLAHSHPFSKMLENHILLNVLPGHI-TGSWVFSSIKPSKV---ESLATKGKKSV- 118

Query: 428  LEDQSSLVPDHTSFINRLIASKDISRYTEEADAFF--SSNGSGSELFSNNFIKSISGKEA 601
                          INRL+ +KD  RY  + D+    S +    ++    FI+++ G+  
Sbjct: 119  -----------LKTINRLLCAKDFGRYDVDTDSSVIRSISREAPDILPEPFIRAVKGRN- 166

Query: 602  VFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKG-RL 778
            V  HDEVHHWT   M  FL R +  RF+F+VVYP ELL     SQNPK+Y F+  K  ++
Sbjct: 167  VMIHDEVHHWTLDDMLGFLDRARPNRFVFSVVYPVELLAGILESQNPKMYKFQDSKSDKI 226

Query: 779  FFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDSK 958
             FFPDG  +E YEQ+ N+ WLF ASH ++    WTV R  S Y+HHLFEV  G   TD  
Sbjct: 227  VFFPDGKASEGYEQRANLRWLFCASHFRTSGSIWTVKRIYSAYSHHLFEVVPGNYFTDEI 286

Query: 959  LFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIGD 1138
             FF+D+ +ID+  IF  RF   +  PI+ + + +VYSYL+CLKKPD++S +AKL+Q++GD
Sbjct: 287  RFFNDFETIDLQCIFKSRFLCRDFVPISKDLVERVYSYLICLKKPDMQSAMAKLKQLMGD 346

Query: 1139 DVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNTF 1318
            D++++  +FF     R++     + LF  S  NK     L   P+ +   F  WK  N F
Sbjct: 347  DLDVRVQVFFRSLVHRILNESECFSLFDVSIVNKWKKKFLDFAPDWLLHGFMTWKSGNFF 406

Query: 1319 EFLFSLGTLVVEIERRV 1369
            +FL SL  L VE+   +
Sbjct: 407  DFLMSLKILQVEVPTEI 423


>ref|YP_008997790.1| replication-associated polyprotein [Apricot vein clearing associated
            virus]
 emb|CDF66416.2| replication-associated polyprotein [Apricot vein clearing associated
            virus]
          Length = 1679

 Score =  964 bits (2493), Expect = 0.0
 Identities = 547/1193 (45%), Positives = 724/1193 (60%), Gaps = 64/1193 (5%)
 Frame = +2

Query: 2624 FRGRKGAFLTKV-DADYGHNGMVYPHNSWVPSLDEIIKICDQGDEFNCALINFYDSDSSL 2800
            FRGR   F  +  + DYGHNG  Y   +W   LD+ I        FN  L+  YD  S +
Sbjct: 511  FRGRSSFFFARSNEIDYGHNGFKYRTENWFAELDDFIP---SDLIFNACLVQVYDKGSKI 567

Query: 2801 GFHKDNEKVYNDDPILTVCTEGEGILSIELKERTSSFIMTAGSFFLMPKGYQKRARHSVR 2980
            GFHKDNE+ Y   PILTV     G+   E  +   +F +T G   L+   Y ++ RH V 
Sbjct: 568  GFHKDNEQCYAGYPILTV---NFGLALFEF-DSGEAFNLTDGDTILLSGDYLRKKRHRVT 623

Query: 2981 NTSP-RVSVTFRKHVRRLDGSPIAIRKDNYR---NICLISALSNALNRDKQVIIAKLRSV 3148
            + S  R+S+TFR+HV R++ SP+    +N +   N C+I A++ AL +    +  K+ + 
Sbjct: 624  SLSDSRISLTFRRHVCRMNKSPLEFFSNNGKLGKNKCIIHAVAMALGQTSNTVANKIVAQ 683

Query: 3149 NGPFWSRFLSDGNGGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRISL---ALQNNH 3319
                    + D     + D Q   E + ++++L+     IV  + G  + L    L  + 
Sbjct: 684  RPDLLQCLVDD----EMLDKQTT-ETICVIMNLHAT---IVNEDEGETMELNPEGLIKSS 735

Query: 3320 FSAVEGHRSMQRTFVSHLAKKGNLNVLEGLDAMLQKDI------------CAGVNYIQFA 3463
            FS ++ H  +     +  +KKG       +D  +  D+            C  +  IQ+ 
Sbjct: 736  FSVLDEHMMVLSDIPNCRSKKG-------IDICMSPDLANSNCAANYEVTCQNLQVIQYQ 788

Query: 3464 ADYENARTLANSFLNMTTGICLGRVLDGGEKYFTHM--LEERPKQIGFDVTAICGFAGSG 3637
            AD+E A  L NSFL  TTG  L  ++  G ++FT M  + ER      +++ + GFAGSG
Sbjct: 789  ADHERAIKLMNSFLAGTTGAVLNELVFKGSRFFTFMDSVNERKSDFVEELSFVPGFAGSG 848

Query: 3638 KS-------RQLQSWLH-------------------SRKKGNF---CVVSPRANLAADWS 3730
            KS       +++   +H                    R +GN    C++SPR NLA DW 
Sbjct: 849  KSLGLLNEVKRISREIHLAKEKKGMGKGSGKGHEKKERNRGNLKSMCIISPRRNLADDWE 908

Query: 3731 FKLELEPNEKRKVATFESFIKMDKCKLDLIILDELTLFPNGYLDLLVYELHEFNAHCKVI 3910
             KL     E   V TFE   K    K+ LI++DELTLFPNGY+DLL++ +   +  CK+I
Sbjct: 909  TKLGPSALEHCSVTTFEVLFKASISKIKLIVVDELTLFPNGYIDLLIFRIRTESPDCKLI 968

Query: 3911 LLFDPLQARYHNRMDELILKFEHDTDRLIGGQDIQYIYSSHRMS--RFFNRFFDVPCFNQ 4084
            L+FDPLQARY +  D  IL  EHD D ++G  ++ Y+Y S R      FN F D+    +
Sbjct: 969  LIFDPLQARYDSAQDRAILGSEHDVDLILGDSEVDYMYQSKRFESEELFNLFEDL---KK 1025

Query: 4085 AETTAEQKLW---------IFDDIYSIMSICIDRDEPCDVLLVESDLEKKAFSPIINVMT 4237
             E  AE +           ++ ++ ++     ++  P DVLLV S  E   F+  I  MT
Sbjct: 1026 NEVDAESRETGKGAKFRPRMYTNLLTMKVEEENQGNPIDVLLVGSFDEAGLFASSIKTMT 1085

Query: 4238 FGESQGLTFNHVCIXXXXXXXXXXXXRWMVALTRAKTRISFCSTFLGGIDEFKVRKGESL 4417
            FGESQGLT +H  I            RW+VALTRA+ +++F    L G++ F       L
Sbjct: 1086 FGESQGLTVDHAAILLSENSALSDDHRWLVALTRARKKVTFLCLHLSGLNGFLSTMENRL 1145

Query: 4418 VTSILQSEMITFDRLNMMV--KCNLVRNEKKNGCSDEVDREERLEGDPFLKPFIFLGQRI 4591
            V +++   ++T  RL+ MV  K N V+ +   G  DEVDRE+RLEGD FLK  IFLGQR 
Sbjct: 1146 VAAVINKGLVTKKRLSSMVRAKLNYVKFKGLAG-KDEVDREDRLEGDLFLKGVIFLGQRC 1204

Query: 4592 KKRXXXXXXXXXXXPRCQTHLYITEPNFGLCYNFDFIREKEQREYRENMLVTNQFCDSYD 4771
            +                +TH ++ + NF  CYNFD IR KE RE+R    VTNQF D+Y+
Sbjct: 1205 EIMEPEIVEPVMAKEDMKTHFFVCQENFAQCYNFDNIRAKELREFRIGHRVTNQFIDNYE 1264

Query: 4772 KAHINGKRETPGPMRFKAIYPKHSADDDMTFWMAVRKRLVFREEEENYQRLSKAHLVGGL 4951
                  K+ T GP+RF+AIYP+H ADDD+TF MAV KRL F  E +  ++L +AH  G +
Sbjct: 1265 IVQHVQKKHTAGPLRFEAIYPRHCADDDVTFLMAVHKRLRFSNEMKEREKLERAHGTGSI 1324

Query: 4952 LYQNFKQKMGLEFSFDQSLLEESVNAFEKKKLEKSCGTIKSHSIRSDIDWALNDVFLFMK 5131
            L+ N  QK+GL F++D  L EE VN FE KKLEKS   + +HSIRSD DW+ N VFLFMK
Sbjct: 1325 LFHNLIQKLGLNFTWDNQLFEECVNDFECKKLEKSKAVLANHSIRSDNDWSPNWVFLFMK 1384

Query: 5132 SQLCTKYEKQFVDAKAGQTLACFQHLILVQFAPWCRYLETQIRNQLPEEIYIHSNKNFDD 5311
            SQLCTKYEKQ+VDAKAGQTLACFQH+ILV FAP+CRY+E Q+R QLP EIYIHSNKNF+D
Sbjct: 1385 SQLCTKYEKQYVDAKAGQTLACFQHMILVTFAPYCRYMEKQLRAQLPGEIYIHSNKNFND 1444

Query: 5312 LNKWVKKFFQRDICVESDYEAFDASQDEYILSFEVHLMKDAHFPQKVIDAYIDLKCKLGC 5491
            LN+WVKK    D+CVESDYEAFDASQD+YILSFE+ +M+  H P+++I AYIDLK  LGC
Sbjct: 1445 LNEWVKKHAGDDLCVESDYEAFDASQDQYILSFELFMMRHMHIPEQIIQAYIDLKVNLGC 1504

Query: 5492 KLGHFSIMRFTGEFCTFLFNTLANMAFTLCRYEWRRGQPIAFAGDDMCALNNLPLRHDFD 5671
            KLGHF+IMRFTGEF TFLFNTLANMAFT+CRYEW  G PIAFAGDDMCAL NL +   F+
Sbjct: 1505 KLGHFAIMRFTGEFSTFLFNTLANMAFTMCRYEWNSGDPIAFAGDDMCALKNLKVTDQFN 1564

Query: 5672 DLFELLSLKAKVERTESPMFCGWRLTPYGIVKEPELVYNRFQVAIEEGKVLECLENYAIE 5851
            ++FE +SLKAK + TE PMFCGWRL+ +GIVKEPELVYNRF VA+E G V +CLENYAIE
Sbjct: 1565 NVFEKISLKAKTQITEVPMFCGWRLSRFGIVKEPELVYNRFMVALERGNVKDCLENYAIE 1624

Query: 5852 VSYAYSLSERLYEVLKSERQIQYHQAVVRFIVTHIDKLKTKVRDLYIEQSSDE 6010
            VSYAYSL ERL+++LK E Q++YHQAVVRFIV H+  L+TKV+DL+ EQS+++
Sbjct: 1625 VSYAYSLGERLFDILKREEQLEYHQAVVRFIVKHLGNLRTKVKDLFAEQSNED 1677



 Score =  288 bits (736), Expect = 3e-74
 Identities = 166/432 (38%), Positives = 241/432 (55%), Gaps = 6/432 (1%)
 Frame = +2

Query: 62   MALMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASK-- 235
            MAL+  +T   ++LG+F +KHV+ IYN   +        R   F       QKK+AS   
Sbjct: 1    MALLY-RTPQVNLLGSFPQKHVEIIYNLQFERFKKICICRFCIFLTHSEKNQKKVASIRG 59

Query: 236  -VGIELYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDKK 412
             +G+ L+P  Y+ HSHP SK+ ENHIL ++LP  + T   +  SIK SKV   +++  K 
Sbjct: 60   WLGVPLHPTPYLAHSHPFSKMLENHILLNVLPGHI-TGSWVFSSIKPSKV---ESLATKG 115

Query: 413  RRVFNLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFF--SSNGSGSELFSNNFIKSI 586
            ++                 INRL+ +KD  RY  + D+    S +    ++    F++++
Sbjct: 116  KKSV------------LKTINRLLCAKDFGRYDVDTDSSVIRSISREAPDILPEPFVRAV 163

Query: 587  SGKEAVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVD 766
             G+  V  HDEVHHWT   M  FL R +  RF+F+VVYP ELL     SQNPK+Y F+  
Sbjct: 164  KGRN-VMIHDEVHHWTLDDMLGFLDRARPNRFVFSVVYPVELLAGILESQNPKMYKFQDS 222

Query: 767  KG-RLFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGEL 943
            K  ++ FFPDG  +E YEQ+ N+ WLF ASH ++    WTV R  S Y+HHLFEV  G  
Sbjct: 223  KSDKIVFFPDGRASEGYEQRANLRWLFCASHFRTSGSIWTVKRIYSAYSHHLFEVVPGNY 282

Query: 944  VTDSKLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLR 1123
             TD   FF+D+ +ID+  IF  RF   +  PI+ + + +VYSYL+CLKKPD++S +AKL+
Sbjct: 283  FTDEIRFFNDFETIDLQCIFKSRFLCRDFVPISKDLVERVYSYLICLKKPDMQSAMAKLK 342

Query: 1124 QIIGDDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWK 1303
            Q++GDD++++  +FF     R++     + LF  S  NK     L   P+ +   F  WK
Sbjct: 343  QLMGDDLDVRVQVFFRSLVHRILNESECFSLFDVSIVNKWKKKFLDFAPDWLLNGFMTWK 402

Query: 1304 KKNTFEFLFSLG 1339
              N   F+  LG
Sbjct: 403  SGN---FIKKLG 411


>gb|AKN09002.1| replicase [Apricot vein clearing associated virus]
          Length = 2021

 Score =  972 bits (2512), Expect = 0.0
 Identities = 582/1353 (43%), Positives = 786/1353 (58%), Gaps = 62/1353 (4%)
 Frame = +2

Query: 2141 KDIFRPYDCPNTHG--KEIPTPMDGNCFFSAFL-TAFECPDSEDLRTDFANWLAFFDGGN 2311
            ++ +RP  C       + I    DG CFF   L T+       +L   F N   F    N
Sbjct: 697  ENTYRPVTCSKIGNSFQIIRASADGRCFFHTLLSTSLFGGSVNNLVNTFCN---FIKNLN 753

Query: 2312 FRELGLKIRPDGVYMEAELIYLFCVFREVTLVLHDRSCETEKVFVIHAGFEEGHIVQKGE 2491
              E   +++ +G Y E  +I LF     + +  H  S +   +    +G      ++   
Sbjct: 754  EHEAARQVQ-EGAYPEGWMINLFLANYGIRMCCHQHSADGVTIET-GSGPISFCSLKMEN 811

Query: 2492 HFLGIETYIVNTSLPEPDL---SDLPCGYDERLTKFLFRPEHFNCSQFRGRKGAFLTKV- 2659
            HF  +       S     L   +  P G        +   +      FRGR   F  +  
Sbjct: 812  HFDYLRCLSSGVSKEHTGLLGKTTYPSG------PIINALQGLKPKSFRGRSSFFFARSN 865

Query: 2660 DADYGHNGMVYPHNSWVPSLDEIIKICDQGDEFNCALINFYDSDSSLGFHKDNEKVYNDD 2839
            + DYGHNG  Y   +W   LD+ I        FN  L+  YD  S +GFHKDNE+ Y   
Sbjct: 866  EIDYGHNGFKYRTENWFAELDDFIP---SDLIFNACLVQVYDKGSKIGFHKDNEQCYAGY 922

Query: 2840 PILTVCTEGEGILSIELKERTSSFIMTAGSFFLMPKGYQKRARHSVRNTSP-RVSVTFRK 3016
            PILTV     G+   E  +   +F +T G   L+   Y K+ RH V + S  R+S+TFR+
Sbjct: 923  PILTV---NFGLALFEF-DSGEAFNLTDGDTILLSGDYLKKKRHRVTSLSDNRISLTFRR 978

Query: 3017 HVRRLDGSPIAIRKDNYR---NICLISALSNALNRDKQVIIAKLRSVNGPFWSRFLSDGN 3187
            HV R++ SP+    ++ +   N C+I A++ AL +    +  K+ +         + D  
Sbjct: 979  HVCRMNKSPLEFFSNDGKLGKNKCIIHAVAMALGQTSNTVANKIVAQRPDLLQCLVDD-- 1036

Query: 3188 GGSIEDCQAACEALGIVVDLYVDGKCIVMGEGGLRISL---ALQNNHFSAVEGHRSMQRT 3358
               + D Q   EA+ ++++L+     IV  + G  + L    L  + FS ++ H  +   
Sbjct: 1037 --EMLDKQTT-EAICVIMNLHAT---IVNEDEGETMELNPEGLIKSSFSVLDEHMMVLSD 1090

Query: 3359 FVSHLAKKGNLNVLEGLD------AMLQKDICAGVNYIQFAADYENARTLANSFLNMTTG 3520
              + ++KKG +++    D      A+  +  C  +  IQ+ AD+E A  L NSFL  TTG
Sbjct: 1091 VPNCMSKKG-IDICMSPDLANSNCAVNYEVTCQNLQVIQYQADHERAIKLMNSFLAGTTG 1149

Query: 3521 ICLGRVLDGGEKYFTHM--LEERPKQIGFDVTAICGFAGSGKS-------RQLQSWLH-- 3667
              L  ++  G ++FT M  + ER      +++ + GFAGSGKS       +++   +H  
Sbjct: 1150 AVLNELVFKGSRFFTFMDSVNERKSDFVEELSFVPGFAGSGKSLGLLNEVKRISREIHLA 1209

Query: 3668 -----------------SRKKGNF---CVVSPRANLAADWSFKLELEPNEKRKVATFESF 3787
                              R +GN    C++SPR NLA DW  KL     E   V TFE F
Sbjct: 1210 KEKKRMGKGDGKGHEKKERNRGNLKSMCIISPRRNLADDWETKLGPSALEHCSVTTFEVF 1269

Query: 3788 IKMDKCKLDLIILDELTLFPNGYLDLLVYELHEFNAHCKVILLFDPLQARYHNRMDELIL 3967
             K    K+ LI++DELTLFPNGY+DLL++ +   + +CK+IL+FDPLQARY +  D  IL
Sbjct: 1270 FKASISKIKLIVVDELTLFPNGYIDLLIFRIRTESPNCKLILIFDPLQARYDSAQDRAIL 1329

Query: 3968 KFEHDTDRLIGGQDIQYIYSSHRMS--RFFNRFFDVPCFNQAETTAEQ-------KLWIF 4120
              EHD D ++G  ++ Y+Y S R      FN F D+   N+ +  +++       +  ++
Sbjct: 1330 GSEHDVDLILGDSEVDYMYQSKRFESEELFNLFEDLKR-NEVDAESQETGKGAKFRPRMY 1388

Query: 4121 DDIYSIMSICIDRDEPCDVLLVESDLEKKAFSPIINVMTFGESQGLTFNHVCIXXXXXXX 4300
             ++ ++     ++  P DVLLV S  E   F+  I  MTFGESQGLT +H  I       
Sbjct: 1389 TNLLTMKVEEENQGNPIDVLLVGSFDEAGLFASSIKTMTFGESQGLTVDHAAILLSENSA 1448

Query: 4301 XXXXXRWMVALTRAKTRISFCSTFLGGIDEFKVRKGESLVTSILQSEMITFDRLNMMV-- 4474
                 RW+VALTRA+ +++F    L G++ F       LV +++   +IT  RL+ MV  
Sbjct: 1449 LSDDHRWLVALTRARKKVTFLCLHLSGLNGFLSTMENRLVAAVINKGLITKKRLSSMVRA 1508

Query: 4475 KCNLVRNEKKNGCSDEVDREERLEGDPFLKPFIFLGQRIKKRXXXXXXXXXXXPRCQTHL 4654
            K N V+ +   G  DEVDRE+RLEGD FLK  IFLGQR +                +TH 
Sbjct: 1509 KLNYVKFKGLAG-KDEVDREDRLEGDLFLKGVIFLGQRCEIMEPEIVEPVIAKEDMKTHF 1567

Query: 4655 YITEPNFGLCYNFDFIREKEQREYRENMLVTNQFCDSYDKAHINGKRETPGPMRFKAIYP 4834
            ++ + NF  CYNFD IR KE RE+R    VTNQF D+Y+      K+ T GP+RF+AIYP
Sbjct: 1568 FVCQENFAQCYNFDNIRAKELREFRIGHRVTNQFIDNYEIVQHGQKKHTAGPLRFEAIYP 1627

Query: 4835 KHSADDDMTFWMAVRKRLVFREEEENYQRLSKAHLVGGLLYQNFKQKMGLEFSFDQSLLE 5014
            +H ADDD+TF MAV KRL F  E +  ++L +AH  G +L+ N  QK+GL F++D  L E
Sbjct: 1628 RHCADDDVTFLMAVHKRLRFSNEMKEREKLERAHGTGSILFHNLIQKLGLNFTWDNQLFE 1687

Query: 5015 ESVNAFEKKKLEKSCGTIKSHSIRSDIDWALNDVFLFMKSQLCTKYEKQFVDAKAGQTLA 5194
            E VN FE KKLEKS   + +HSIRSD DW+ N VFLFMKSQLCTKYEKQ+VDAKAGQTLA
Sbjct: 1688 ECVNDFECKKLEKSKAVLANHSIRSDNDWSPNWVFLFMKSQLCTKYEKQYVDAKAGQTLA 1747

Query: 5195 CFQHLILVQFAPWCRYLETQIRNQLPEEIYIHSNKNFDDLNKWVKKFFQRDICVESDYEA 5374
            CFQH+ILV FAP+CRY+E Q+R QLP EIYIHSNKNF+DLN+WVKK+   D+CVESDYEA
Sbjct: 1748 CFQHMILVTFAPYCRYMEKQLRAQLPGEIYIHSNKNFNDLNEWVKKYAGDDLCVESDYEA 1807

Query: 5375 FDASQDEYILSFEVHLMKDAHFPQKVIDAYIDLKCKLGCKLGHFSIMRFTGEFCTFLFNT 5554
            FDASQD+YILSFE+ +M+  H P+++I AYIDLK  LGCKLGHF+IMRFTGEF TFLFNT
Sbjct: 1808 FDASQDQYILSFELFMMRHMHIPEQIIQAYIDLKVNLGCKLGHFAIMRFTGEFSTFLFNT 1867

Query: 5555 LANMAFTLCRYEWRRGQPIAFAGDDMCALNNLPLRHDFDDLFELLSLKAKVERTESPMFC 5734
            LANMAFT+ RYEW  G PIAFAGDDMCAL NL +   F+++FE +SLKAK + TE PMFC
Sbjct: 1868 LANMAFTMRRYEWNSGDPIAFAGDDMCALKNLKVTDQFNNVFEKISLKAKTQITEVPMFC 1927

Query: 5735 GWRLTPYGIVKEPELVYNRFQVAIEEGKVLECLENYAIEVSYAYSLSERLYEVLKSERQI 5914
            GWRL+ +GIVKEPELVYNRF VA+E G V +CLENYAIEVSYAYSL ERL+++LK E Q+
Sbjct: 1928 GWRLSKFGIVKEPELVYNRFMVALERGNVKDCLENYAIEVSYAYSLGERLFDILKREEQL 1987

Query: 5915 QYHQAVVRFIVTHIDKLKTKVRDLYIEQSSDED 6013
            +YHQAVVRFIV H+  L+TKV+DL+ EQ SDED
Sbjct: 1988 EYHQAVVRFIVKHLGDLRTKVKDLFAEQ-SDED 2019



 Score =  303 bits (775), Expect = 1e-78
 Identities = 164/438 (37%), Positives = 246/438 (56%), Gaps = 4/438 (0%)
 Frame = +2

Query: 68   LMSNKTAIESILGNFDKKHVDAIYNAAAQTIISHSEFRNKHFAYSLNSYQKKIASKVGIE 247
            +++ K+  E    N +      I ++A +++    +    HFAY +++  K+  S +G+ 
Sbjct: 4    ILNYKSPSEKFFSNLEMAKKTEIISSAYKSLKQQLDLNGGHFAYEVSASLKEKLSSLGVP 63

Query: 248  LYPNGYVPHSHPLSKIFENHILFDILPSVVNTSKLIMCSIKESKVLVFKNIRDK-KRRVF 424
            L+P  Y+ HSHP SK+ ENHIL ++LP  + T   +  SIK SKV   +++  K K+ V 
Sbjct: 64   LHPTPYLAHSHPFSKMLENHILLNVLPGHI-TGSWVFSSIKPSKV---ESLATKGKKSVL 119

Query: 425  NLEDQSSLVPDHTSFINRLIASKDISRYTEEADAFF--SSNGSGSELFSNNFIKSISGKE 598
                           +NRL+ +KD  RY  + D+    S +    ++    FI+++ G+ 
Sbjct: 120  RT-------------VNRLLCAKDFGRYDVDTDSSVIRSISREAPDILPEPFIRAVKGRN 166

Query: 599  AVFFHDEVHHWTKAQMFSFLKRTKVRRFIFTVVYPPELLRKFANSQNPKIYDFKVDKG-R 775
             V  HDEVHHWT   M  FL R +  RF+F+VVYP ELL     SQNPK+Y F+  K  +
Sbjct: 167  -VMIHDEVHHWTLDDMLGFLDRARPNRFVFSVVYPVELLAGIPESQNPKMYKFQDSKSDK 225

Query: 776  LFFFPDGVKTEAYEQKLNMEWLFSASHLKSGDHTWTVTRHKSIYAHHLFEVSAGELVTDS 955
            + FFPDG  +E YEQ+ N+ WLF ASH ++    WTV R  S Y+HHLFEV  G   TD 
Sbjct: 226  IVFFPDGKASEGYEQRANLRWLFCASHFRTSGSIWTVKRIYSAYSHHLFEVVPGNYFTDE 285

Query: 956  KLFFSDYGSIDMSKIFLDRFRSYEVFPIAIEHLYKVYSYLLCLKKPDLESGLAKLRQIIG 1135
              FF+D+ +ID+  IF  RF   +  PI+ + + +VYSYL+CLKKPD++S +AKL+Q++G
Sbjct: 286  IRFFNDFETIDLQCIFKSRFLCRDFVPISKDLVERVYSYLICLKKPDMQSAMAKLKQLMG 345

Query: 1136 DDVEIKEFLFFEQFCKRLIERQTSWGLFGHSFFNKLTDMALSGMPNVVARMFPQWKKKNT 1315
            DD++++  +FF     R++     + LF  S  NK     L   P+ +   F  WK  N 
Sbjct: 346  DDLDVRVQVFFRSLVHRILNESECFSLFDVSIVNKWKKKFLDFAPDWLLHGFMTWKSGNF 405

Query: 1316 FEFLFSLGTLVVEIERRV 1369
            F+FL SL  L VE+   +
Sbjct: 406  FDFLMSLKILQVEVPTEI 423