BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia32_contig00000006
         (3078 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1777   0.0  
gb|AAX19931.1| viral replicase [Nandina mosaic virus]                1642   0.0  
dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1639   0.0  
dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1633   0.0  
dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1632   0.0  
dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1630   0.0  
gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1630   0.0  
dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1629   0.0  
dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1627   0.0  
emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1625   0.0  
dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1624   0.0  
dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica ...  1623   0.0  
gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1623   0.0  
gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1622   0.0  
gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]                 1621   0.0  
gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1617   0.0  
gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1616   0.0  
gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]                 1615   0.0  
gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica m...  1578   0.0  
ref|NP_620836.1| replicase [Plantago asiatica mosaic virus] >gi|...  1536   0.0  

>dbj|BAX03473.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 1777 bits (4603), Expect = 0.0
 Identities = 872/988 (88%), Positives = 913/988 (92%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVFSQLTDPSLKAVIQDEAYRTLK ELA TRHSNPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRTLKHELAHTRHSNPFAQSPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPK+NPVSFLFMKP+KLR+FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKDNPVSFLFMKPSKLRYFHRGPTHGDLFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+TV+SRLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETVLSRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYS+DGFMYIPGGHAGASYFHKYDQLEWLTVGHLTA NQPTITA
Sbjct: 181  EALYRLRSLYPQIYTLTYSDDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTANNQPTITA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QRLLRPLRSDIQ++LQFFRGRPSFV+LIKALDWQP+TLEFPVR+VNT+LRGPPGF N
Sbjct: 361  NLLQRLLRPLRSDIQKILQFFRGRPSFVRLIKALDWQPVTLEFPVRSVNTKLRGPPGFRN 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFTKPHPVNPDD DTMR+FREF           +ADSLEGSAEN   HTSLKVGH+DLST
Sbjct: 421  PFTKPHPVNPDDDDTMRSFREFTHTLDNSSPATVADSLEGSAENPTIHTSLKVGHSDLST 480

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
            EQLRALHELGN+RLGGPLLPKIT                  T  S +  Q +H D+APVN
Sbjct: 481  EQLRALHELGNSRLGGPLLPKITLNEQSREPCPDLPPEPRPTTTSTTQAQENHPDQAPVN 540

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
            S+P+TLPWV+WLPKLNALGFEALEIQ DPSTG+ IMPI DVR L KATLPEHW EP LSK
Sbjct: 541  SEPSTLPWVSWLPKLNALGFEALEIQIDPSTGDTIMPITDVRSLQKATLPEHWIEPSLSK 600

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +LTTLR LNR PTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQ MLT+NVT NL
Sbjct: 601  ILTTLRSLNRSPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQAMLTDNVTTNL 660

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQ++LRQNP+LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 661  AISVIHGAGGSGKSQALQSMLRQNPDLPMEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 720

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCSKSPVV+FDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP
Sbjct: 721  FVCSKSPVVVFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 780

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            ATTIF++LSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSL+KKA
Sbjct: 781  ATTIFTKLSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLIKKA 840

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 841  AFTDAGHKVSTYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VEDK+TTL DFKE L
Sbjct: 901  AFWEKLEATPYLKTFLSLVREDKIEEFAAPKDAPKPIAPPVTHFPVEDKSTTLDDFKEGL 960

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            +DKFDREIFTEAHGHTNCVQG+DPTTQL
Sbjct: 961  NDKFDREIFTEAHGHTNCVQGNDPTTQL 988


>gb|AAX19931.1| viral replicase [Nandina mosaic virus]
          Length = 1368

 Score = 1642 bits (4251), Expect = 0.0
 Identities = 816/988 (82%), Positives = 864/988 (87%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRH+NPFAQ+P+AADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHTNPFAQSPDAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR+FHRGPTHGDFFLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRYFHRGPTHGDFFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQDTV++RLENI T+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTVLNRLENISTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLT+GHL APNQPT+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTIGHLQAPNQPTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTT+ YVTVPDIFLPEKYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTDPYVTVPDIFLPEKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEF ASLDSHTCFEDVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFAASLDSHTCFEDVLSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QRLLRPLR+D+QR+L FFRGRPSFVKLIKALDWQPITLEFPVR VNTRLRGPPGF +
Sbjct: 361  NLLQRLLRPLRADMQRILHFFRGRPSFVKLIKALDWQPITLEFPVRRVNTRLRGPPGFLS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNPDDA+T  +FREF           + + LE S E+  +HTSLKV    LS 
Sbjct: 421  PFTRPQPVNPDDAETTESFREFIQPLNPSPTATVTEMLENSTESDVTHTSLKVVPQSLSP 480

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
            EQL ALHELGN+R GGP+LPK                    T  S+ L +  H    P  
Sbjct: 481  EQLSALHELGNSRCGGPMLPK---------------RSSNHTHTSSDLLRRRH----PRQ 521

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
                  P  +   K   +GFEALEIQTDPSTG+ IMPI D R+LP+A +P HW+ P   K
Sbjct: 522  QRSTNPPMGSLAAKAKRIGFEALEIQTDPSTGQPIMPITDTRELPRAIMPAHWDSPQFEK 581

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            ++ TLR LNRFPTPW PDRARARAFTSDVKNSRTGKALHRE+QTWKETQTMLT+N   + 
Sbjct: 582  IIATLRNLNRFPTPWSPDRARARAFTSDVKNSRTGKALHRESQTWKETQTMLTDNAEIHT 641

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQNP+LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 642  AISVIHGAGGSGKSQALQTLLRQNPDLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 701

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FV S+ PVVIFDDYGKLPQGYIEAFAMTHA+LEL+ILTGDPRQSTHHEANEEALISKL+P
Sbjct: 702  FVSSRGPVVIFDDYGKLPQGYIEAFAMTHANLELIILTGDPRQSTHHEANEEALISKLSP 761

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            ATT FSELSRYYINATHRNSKFLANKLG+YSSN CPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 762  ATTTFSELSRYYINATHRNSKFLANKLGIYSSNHCPLKVTYGFQPQPGLHLLVPSLVKKA 821

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDS HFVNSNAQSS
Sbjct: 822  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSNHFVNSNAQSS 881

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKIEEFS                 VE+ TT L DF+E L
Sbjct: 882  AFWEKLEATPYLKTFLSLVREDKIEEFSAPPDPPKSVMPPVTHFPVEECTTALDDFREEL 941

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIFTEAHGHTNCVQ DDPTTQL
Sbjct: 942  HDKFDREIFTEAHGHTNCVQTDDPTTQL 969


>dbj|BAX03478.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 1639 bits (4244), Expect = 0.0
 Identities = 804/988 (81%), Positives = 860/988 (87%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHTNPFAQSPEAADALEKLGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPV+FLFMKPAKLR+FHRGPTH D FLN HV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVAFLFMKPAKLRYFHRGPTHRDLFLNDHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T++SRLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETILSRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH+YDQLEWLTVGHL+A  QPT+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHRYDQLEWLTVGHLSAQGQPTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNY+TP +RTFTT + YVTVPDIFLPE+YNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYMTPPKRTFTTADQYVTVPDIFLPERYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QRLLRP+R+D+QR++QFF+G+PSFVKLIKALDWQPITLEFPVR+V T +RGPPGF +
Sbjct: 361  NLLQRLLRPIRADMQRIVQFFKGQPSFVKLIKALDWQPITLEFPVRSVKTHVRGPPGFQS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFTKPHPVN DD  T + F++F           +A +LE + E  A HT LK+    L+ 
Sbjct: 421  PFTKPHPVNTDDGQTSKDFQDFTLRGAGTTHHTVAAALEATTECEAGHTCLKIATEHLTE 480

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL ALH LGNTR GGPLLP  T                   +        +   E P N
Sbjct: 481  PQLLALHNLGNTRCGGPLLPPATTSAQVEEPCPDLPPAPRAAEGQTQTPPQEEQGEQPRN 540

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
             +P  LPWVAWLPKLNALGFEA EIQTDPSTG +IMPI D  DLP+ATLP HW +P L K
Sbjct: 541  VEPNELPWVAWLPKLNALGFEAREIQTDPSTGAMIMPITDTLDLPRATLPAHWEDPELQK 600

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +LTTLR LNRFPTPW PDRARARAFTSDVKNSRTGKALHRE+  WKETQT+LT+    +L
Sbjct: 601  ILTTLRSLNRFPTPWTPDRARARAFTSDVKNSRTGKALHRESLVWKETQTLLTDTADVDL 660

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQ+P LPIEVVLPTNELRLDWL+KLPHNPPEQFRTFERA
Sbjct: 661  AISVIHGAGGSGKSQALQTLLRQDPTLPIEVVLPTNELRLDWLRKLPHNPPEQFRTFERA 720

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCS+SPVVIFDDYGKLPQGY+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL P
Sbjct: 721  FVCSRSPVVIFDDYGKLPQGYLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLTP 780

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            AT +F++LSRYYINATHRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPSLMKKA
Sbjct: 781  ATAVFAQLSRYYINATHRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPSLMKKA 840

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 841  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKI EFS                 VE ++TTL DFKE L
Sbjct: 901  AFWEKLEATPYLKTFLSLVREDKIMEFSASDDSPAPVAPPTTHFPVEGRSTTLDDFKEEL 960

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIF EAHGHTNCVQ DD T QL
Sbjct: 961  DDKFDREIFNEAHGHTNCVQTDDTTIQL 988


>dbj|BAG12128.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1633 bits (4228), Expect = 0.0
 Identities = 814/988 (82%), Positives = 857/988 (86%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +  + L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEXTLAQQSETPDEHQSLSLKCSTLPE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIF  AHGHTNCVQ DDPTTQL
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQL 981


>dbj|BAG12123.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1632 bits (4227), Expect = 0.0
 Identities = 814/988 (82%), Positives = 857/988 (86%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +  + L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCSTLPE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIF  AHGHTNCVQ DDPTTQL
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQL 981


>dbj|BAG12133.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1630 bits (4221), Expect = 0.0
 Identities = 813/988 (82%), Positives = 856/988 (86%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +  + L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCSTLPE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL ALHELGN R G PLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGAPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +L+TLRGLNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRGLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKRVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIF  AHGHTNCVQ DDPTTQL
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQL 981


>gb|AMN10083.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1387

 Score = 1630 bits (4220), Expect = 0.0
 Identities = 807/988 (81%), Positives = 853/988 (86%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVFSQLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKA+ESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAVESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I+RL +IPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIINRLADIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH+YDQLEWLTVGHLTAP QPTITA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHRYDQLEWLTVGHLTAPGQPTITA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTP RRTF T++HYVTVP IFLPE YNCRTPISKT MMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPARRTFATSDHYVTVPQIFLPEDYNCRTPISKTTMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCF+DVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFQDVLSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QRLLRPLR+D QRVLQFF+GRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF N
Sbjct: 361  NLLQRLLRPLRADFQRVLQFFQGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKN 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNP+DADT R F++F           +  +LE +AE+   HT LKV    L  
Sbjct: 421  PFTQPQPVNPEDADTSRGFQDFTRATTPKLQPTVEATLEATAESSDHHTQLKVLCDTLPE 480

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
            +QL A+H LG+ R GGPLLP  T                  + AS +    +  D  P  
Sbjct: 481  KQLEAIHALGHLRCGGPLLPAPTQSCSPAEPCPDLPPSPVKSTASPASPDPNVLDAQPTT 540

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
              P TLPWVAWLPKLNALGFEALE+Q DPSTGE+IMPI D RDLP+ATLP HW    L  
Sbjct: 541  QAPETLPWVAWLPKLNALGFEALEVQHDPSTGEMIMPITDTRDLPRATLPPHWQGHDLES 600

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +LTTLR LNRFPTPW PDR RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTEN  A+L
Sbjct: 601  ILTTLRSLNRFPTPWSPDRTRARAFTSDVKNSRTGKALHRESQAWKETQTMLTENTQADL 660

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQNP LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 661  AISVIHGAGGSGKSQALQTLLRQNPSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 720

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FV S SPVVIFDDYGKLPQGY+EAFA+THA+LEL ILTGDPRQSTHHE+NEEALISKL P
Sbjct: 721  FVSSHSPVVIFDDYGKLPQGYLEAFALTHANLELAILTGDPRQSTHHESNEEALISKLPP 780

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            ATTI+S LSRYYINATHRNSK+LANKLGVYS+NSCPL VTYGFQP PGMHLLVPSL+KKA
Sbjct: 781  ATTIYSTLSRYYINATHRNSKYLANKLGVYSANSCPLNVTYGFQPLPGMHLLVPSLVKKA 840

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTD GHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 841  AFTDVGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 900

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKI EF                  VE+  TTL DFKE L
Sbjct: 901  AFWEKLEATPYLKTFLSLVREDKITEFQAPEDAPKPVTPPVTHFPVEEPATTLDDFKEEL 960

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIFT   GHTNCVQ DDPT QL
Sbjct: 961  HDKFDREIFTSDRGHTNCVQTDDPTIQL 988


>dbj|BAG12143.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1629 bits (4219), Expect = 0.0
 Identities = 813/988 (82%), Positives = 855/988 (86%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +    L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIF  AHGHTNCVQ DDPTTQL
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQL 981


>dbj|BAG12148.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1627 bits (4213), Expect = 0.0
 Identities = 812/988 (82%), Positives = 854/988 (86%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +    L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P + +
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMER 593

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQTMLTEN   NL
Sbjct: 594  ILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQTMLTENSQTNL 653

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 713

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            AT IFSELSRYYINATHRNSK LANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKLLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLVKKA 833

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIF  AHGHTNCVQ DDPTTQL
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQL 981


>emb|CEN56830.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1625 bits (4207), Expect = 0.0
 Identities = 808/989 (81%), Positives = 857/989 (86%), Gaps = 1/989 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAF-----CQAAAAVETILEQQAETPDEHQSLRLDCPTLSE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPV 1731
             QL ALHELGN R GGPLLP+                    T A+   +Q        P 
Sbjct: 476  HQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1732 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1911
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1912 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2091
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2092 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2271
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2272 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2451
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2452 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2631
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2632 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2811
            AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2812 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2991
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2992 LSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            L DKFDREIF +AHGHTNCVQ D+PTTQL
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQL 981


>dbj|BAG12153.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1624 bits (4206), Expect = 0.0
 Identities = 813/993 (81%), Positives = 854/993 (86%), Gaps = 5/993 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTTPGQITVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPD+FLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDVFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPL+S I ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLKSGITQLLNFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PF +P PVNPDDA+T ++F+ F              +LE  AE    H SL +    L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATITAEA-----ALEQQAETPDEHQSLSLKCPTLPE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLN-----QGDHTD 1719
             QL ALHELGNTR GGPLLPK                      A  S N     +   T 
Sbjct: 476  HQLWALHELGNTRCGGPLLPK-------GPAKLTTVEPCPDLPAENSANPEPPRKTTQTL 528

Query: 1720 EAPVNSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNE 1899
            + P   DP TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  
Sbjct: 529  DLPHPEDPTTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRAEGHAHWQG 588

Query: 1900 PGLSKVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTEN 2079
            P + ++++TLR  NR+PTPW PDR+RA+AFTSDVKNSRTGKALHRE+Q WKETQTML EN
Sbjct: 589  PDMERIISTLRSFNRYPTPWNPDRSRAKAFTSDVKNSRTGKALHRESQVWKETQTMLAEN 648

Query: 2080 VTANLAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFR 2259
               NLAISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDWLKKLPHNPPEQFR
Sbjct: 649  SQTNLAISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWLKKLPHNPPEQFR 708

Query: 2260 TFERAFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALI 2439
            TFERAFVCS+ PVVIFDDYGKLPQGY+EAFA+THASLELVILTGDPRQSTHHE+NEEALI
Sbjct: 709  TFERAFVCSRCPVVIFDDYGKLPQGYLEAFALTHASLELVILTGDPRQSTHHESNEEALI 768

Query: 2440 SKLAPATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPS 2619
            SKL PAT IFSELSRYYINATHRNSKFLANKLGVYSSN CPLKVTYGFQPQPG+HLLVPS
Sbjct: 769  SKLPPATAIFSELSRYYINATHRNSKFLANKLGVYSSNPCPLKVTYGFQPQPGLHLLVPS 828

Query: 2620 LMKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 2799
            L+KKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS
Sbjct: 829  LVKKAAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNS 888

Query: 2800 NAQSSAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGD 2979
            NAQSSAFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL D
Sbjct: 889  NAQSSAFWEKLEATPYLKTFLSLVREDKIEEFTATTAEAKPVAPPCTHFPVEDGTTTLDD 948

Query: 2980 FKESLSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            FKE L DKFDREIF   HGHTNCVQ DDPTTQL
Sbjct: 949  FKEELHDKFDREIFNPTHGHTNCVQTDDPTTQL 981


>dbj|BAG12138.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1623 bits (4204), Expect = 0.0
 Identities = 810/988 (81%), Positives = 854/988 (86%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQTPEAADALEALGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQTPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQDT+I RLENIPT+IAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQDTIIKRLENIPTSIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFH Y QLEWLTVGHLT P Q T+TA
Sbjct: 181  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHNYSQLEWLTVGHLTTPGQITVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPLRS + ++L FFRGRPSFVKLIKALDWQPITLEFPVR VNT LRG PGF +
Sbjct: 361  NLLQRMLRPLRSGLTQLLDFFRGRPSFVKLIKALDWQPITLEFPVRKVNTHLRGAPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PF +P PVNPDDA+T ++F+ F           +  +L   +E    H SL +    L  
Sbjct: 421  PFARPQPVNPDDAETTQSFQAFCQATAT-----VEATLAQQSETPDEHQSLSLKCPTLPE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL ALHELGN R GGPLLPK                           ++   + + P  
Sbjct: 476  HQLWALHELGNARCGGPLLPK--GPAKLTRAEPCPDLPAEPQAVPEPPHKTTQSSDLPHP 533

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
             DP+TLPWVAWLPKLNALGFEALEIQTDPSTGE+IMPI D R+LP+A    HW  P +++
Sbjct: 534  QDPSTLPWVAWLPKLNALGFEALEIQTDPSTGEMIMPITDTRELPRADGHAHWQGPDMAR 593

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +L+TLR LNR+PTPW PDRARA+AFTSDVKNSRTGKALHRE+Q WKETQ MLTEN   NL
Sbjct: 594  ILSTLRSLNRYPTPWNPDRARAKAFTSDVKNSRTGKALHRESQVWKETQAMLTENSQTNL 653

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQ P LPIEVVLPTNELRLDW KKLPHNPPEQFRTFERA
Sbjct: 654  AISVIHGAGGSGKSQALQTLLRQYPNLPIEVVLPTNELRLDWPKKLPHNPPEQFRTFERA 713

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 714  FVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHESNEEALISKLPP 773

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            AT IFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQP+PG+HLLVPSL+KKA
Sbjct: 774  ATAIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPRPGLHLLVPSLVKKA 833

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS
Sbjct: 834  AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 893

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKIEEF+                 VED TTTL DFKE L
Sbjct: 894  AFWEKLEATPYLKTFLSLVREDKIEEFTAIPAEAKHVAPPCTHFPVEDGTTTLDDFKEEL 953

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIF  AHGHTNCVQ DDPTTQL
Sbjct: 954  RDKFDREIFNPAHGHTNCVQTDDPTTQL 981


>gb|AMY62723.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1623 bits (4202), Expect = 0.0
 Identities = 804/989 (81%), Positives = 859/989 (86%), Gaps = 1/989 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PF +P PVNPDDA+T  +F+ F           +   LE SAE    H SL++    LS 
Sbjct: 421  PFARPQPVNPDDAETTHSFQAF-----CQATAAVGTILEQSAETPDEHQSLRLNCPTLSE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPV 1731
             QL ALHELGNTR GGPLLP+                    T A+   +Q      + P 
Sbjct: 476  HQLWALHELGNTRCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPDLPS 532

Query: 1732 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1911
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1912 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2091
            ++++TLR +NR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSINRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2092 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2271
            LA+SVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAVSVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2272 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2451
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHA+LELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHANLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2452 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2631
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGLHLLVPSLMKK 832

Query: 2632 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2811
            AAFTDAGHKVSTYAGCQGITAPRVQILLD+DTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKVSTYAGCQGITAPRVQILLDSDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2812 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2991
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2992 LSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            L DKFDREIF +AHG+TNCVQ D+PTTQL
Sbjct: 953  LQDKFDREIFNQAHGYTNCVQTDNPTTQL 981


>gb|AMY62703.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
 gb|AMY62708.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1622 bits (4201), Expect = 0.0
 Identities = 805/989 (81%), Positives = 855/989 (86%), Gaps = 1/989 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP  PT+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLPTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSSATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAF-----CQAAAAVETILEQQAETPDEHQSLRLDCPTLSE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPV 1731
             QL ALH LGN R GGPLLP+                    T A+   +Q        P 
Sbjct: 476  HQLWALHALGNARCGGPLLPQ---RPDTSTAVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1732 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1911
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1912 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2091
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2092 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2271
            +AISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  VAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2272 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2451
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2452 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2631
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2632 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2811
            AAFTDAGHK STYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKASTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2812 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2991
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2992 LSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            L DKFDREIF +AHGHTNCVQ D+PTTQL
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQL 981


>gb|ANY93292.1| RdRp [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1621 bits (4198), Expect = 0.0
 Identities = 806/989 (81%), Positives = 856/989 (86%), Gaps = 1/989 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I RLENIPT+IAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTSIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAF-----CQAAAAVETILEQQAETPDEHQSLRLDCPTLSE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPV 1731
             QL ALHELGN R GGPLLP+                    T A+   +Q        P 
Sbjct: 476  HQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1732 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1911
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1912 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2091
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2092 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2271
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2272 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2451
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2452 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2631
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2632 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2811
            AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2812 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2991
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2992 LSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            L DKFDREIF +AHGHTNCVQ D+PTTQL
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQL 981


>gb|AMY62718.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1617 bits (4187), Expect = 0.0
 Identities = 804/989 (81%), Positives = 853/989 (86%), Gaps = 1/989 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR VNT LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVNTLLRGPPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAF-----CQAAAAVETILEQQAETPDEHXSLRLDCPTLSE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPV 1731
             QL ALHELGN R GGPLLP+                    T A+   +Q        P 
Sbjct: 476  HQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1732 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1911
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1912 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2091
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2092 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2271
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2272 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2451
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2452 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2631
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSL KK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLXKK 832

Query: 2632 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2811
            AAFTDAGHK STYAGCQGITAPRVQILLDNDTTMC KEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKASTYAGCQGITAPRVQILLDNDTTMCXKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2812 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2991
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2992 LSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            L DKFDREIF +AHGHTNCVQ D+PTTQL
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQL 981


>gb|AMY62713.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1616 bits (4185), Expect = 0.0
 Identities = 804/989 (81%), Positives = 854/989 (86%), Gaps = 1/989 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINS P
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSXP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPPGF +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVDTLLRGPPGFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNPDDA+T  +F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHSFQAF-----CQAAAAVETILEQQAETPDEHQSLRLDCPTLSE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPV 1731
             QL ALHELGN R GGPLLP+                    T A+   +Q        P 
Sbjct: 476  HQLWALHELGNARCGGPLLPQ---RPDTSTVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1732 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1911
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW  P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQGPDME 592

Query: 1912 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2091
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2092 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2271
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2272 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2451
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2452 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2631
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2632 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2811
            AAFTDAGHK STYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKASTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2812 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2991
            SAFWEKLEATPYLKTFLSLVRED++ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDRVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2992 LSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            L DKFDREIF +AHGHTNCVQ D+PTTQL
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQL 981


>gb|AMD78101.1| RdRP [Plantago asiatica mosaic virus]
          Length = 1380

 Score = 1615 bits (4182), Expect = 0.0
 Identities = 803/989 (81%), Positives = 853/989 (86%), Gaps = 1/989 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVF+QLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALE LGINSHP
Sbjct: 1    MSNVRNVFAQLTDPSLKAVIQDEAYRHLKRELAQTRHNNPFAQSPEAADALEVLGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLR FHRGPTHGD FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRHFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I RLENIPTNIAF+GDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIIKRLENIPTNIAFIGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYRLRSL+PQIYTLTYSEDGFMYIPGGHAGASYFHKY QLEWLTVGHLTAP   T+TA
Sbjct: 181  EALYRLRSLHPQIYTLTYSEDGFMYIPGGHAGASYFHKYSQLEWLTVGHLTAPGLLTVTA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLP KYNCRTPISKTIMMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPAKYNCRTPISKTIMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSE TLLVNYFE TASLDSHTCFED+LSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSETTLLVNYFELTASLDSHTCFEDILSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QR+LRPL S   ++L FFRGRPSFVKLI+ALDWQPITLEFPVR V+T LRGPP F +
Sbjct: 361  NLLQRILRPLTSGATQILNFFRGRPSFVKLIQALDWQPITLEFPVRKVHTLLRGPPWFDS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNPDDA+T   F+ F           +   LE  AE    H SL++    LS 
Sbjct: 421  PFTRPQPVNPDDAETTHIFQAF-----CQAAAAVETILEQQAETPEEHQSLRLDCPTLSE 475

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQ-GDHTDEAPV 1731
             QL +LHELGN R GGPLLP+                    T A+   +Q        P 
Sbjct: 476  HQLWSLHELGNARCGGPLLPQ---RPDTATVVEPCPDLPPETHAAPEPSQRNTQAPNLPS 532

Query: 1732 NSDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLS 1911
              DP TLPWVAWLPKLNALGFEALEIQ DPSTG +IMPI D ++LP+A  P HW +P + 
Sbjct: 533  PQDPTTLPWVAWLPKLNALGFEALEIQNDPSTGNMIMPITDTKELPRAIGPAHWQDPDME 592

Query: 1912 KVLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTAN 2091
            ++++TLR LNR+PTPW PDR+RARAFTSDVKNSRTGKALHRE+Q WKETQTMLTE+   N
Sbjct: 593  QIISTLRSLNRYPTPWNPDRSRARAFTSDVKNSRTGKALHRESQVWKETQTMLTESTQTN 652

Query: 2092 LAISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFER 2271
            LAISVIHGAGGSGKSQALQTLLRQ+P LP+EVVLPTNELRLDWLKKLPHNPPEQFRTFER
Sbjct: 653  LAISVIHGAGGSGKSQALQTLLRQHPSLPVEVVLPTNELRLDWLKKLPHNPPEQFRTFER 712

Query: 2272 AFVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLA 2451
            AFVCS+ PVVIFDDYGKLPQGY+EAFAMTHASLELVILTGDPRQSTHHEANEEALISKL 
Sbjct: 713  AFVCSRCPVVIFDDYGKLPQGYLEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLP 772

Query: 2452 PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2631
            PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYG QPQPG+HLLVPSLMKK
Sbjct: 773  PATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGSQPQPGLHLLVPSLMKK 832

Query: 2632 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2811
            AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHF+NSNAQS
Sbjct: 833  AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFINSNAQS 892

Query: 2812 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2991
            SAFWEKLEATPYLKTFLSLVREDK+ EFS                 VED TTTL DF+E 
Sbjct: 893  SAFWEKLEATPYLKTFLSLVREDKVAEFSASPADPTPVAPPCTHFPVEDGTTTLDDFREE 952

Query: 2992 LSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            L DKFDREIF +AHGHTNCVQ D+PTTQL
Sbjct: 953  LQDKFDREIFNQAHGHTNCVQTDNPTTQL 981


>gb|AVL84357.1| RNA-dependent RNA polymerase [Plantago asiatica mosaic virus]
          Length = 1388

 Score = 1578 bits (4085), Expect = 0.0
 Identities = 782/989 (79%), Positives = 832/989 (84%), Gaps = 1/989 (0%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVFSQLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTH D FLNAHV
Sbjct: 61   YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHSDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+++RLENIPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIVNRLENIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            EALYR RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVG LT+P QPTITA
Sbjct: 181  EALYRPRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGRLTSPGQPTITA 240

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNYLTPERRTF T +HYVTVP IFLPE YNCRTPISKT MMQMF
Sbjct: 241  QRLETKGANHLFIFQRGNYLTPERRTFATNDHYVTVPHIFLPENYNCRTPISKTTMMQMF 300

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDVLSG
Sbjct: 301  FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDVLSG 360

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
            NL+QRLLRPLRSD QR+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T LRGPPGF +
Sbjct: 361  NLLQRLLRPLRSDFQRILQFFRGRPSFVKLIKALDWQPITLEFPVRDVCTTLRGPPGFKS 420

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            P T+P PVNP+DADT R+F++F           + ++L+ +AE L  HT LKV    LS 
Sbjct: 421  PLTRPQPVNPEDADTSRSFQDFTRTTAASPKPTVEETLDATAERLDHHTQLKVHCDTLSE 480

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL A+H LG+ R GGPLLP++T                   Q           D  P  
Sbjct: 481  RQLEAIHSLGHLRCGGPLLPELTPRHAPAEPCPDLPPSPTKGQTETPSPSTSGPDLQPTT 540

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
              P TLPWVAWLPKLNALGFEALE+Q DPSTGE+IMPI D R+LP+ATLP HW    L+ 
Sbjct: 541  QAPETLPWVAWLPKLNALGFEALEVQHDPSTGEMIMPITDTRELPRATLPAHWQGSNLTS 600

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +LTTLR LNRFPTPW PDR RARAFTSDVKNSRTGKALHRE+QTWKETQT+L EN    L
Sbjct: 601  ILTTLRSLNRFPTPWIPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTLLAENTQVEL 660

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            A+SVIHGAGGSGKSQALQTLLRQ+P LPIEV+LPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 661  ALSVIHGAGGSGKSQALQTLLRQDPSLPIEVILPTNELRLDWLKKLPHNPPEQFRTFERA 720

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FVCS+SPVVIFDDYGKLPQGY+EAFA+THA+LELVILTG P+              K +P
Sbjct: 721  FVCSQSPVVIFDDYGKLPQGYLEAFALTHANLELVILTGGPQAVHAPRVQRGGAHLKASP 780

Query: 2455 -ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKK 2631
                     SRYYINATHRNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKK
Sbjct: 781  RPQPSIQPFSRYYINATHRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKK 840

Query: 2632 AAFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 2811
            AAFTDAGHKVSTYAGCQGITAP+VQILLD+DTTMCTKEVLYTALSRAVDSIHFVNSNAQS
Sbjct: 841  AAFTDAGHKVSTYAGCQGITAPKVQILLDSDTTMCTKEVLYTALSRAVDSIHFVNSNAQS 900

Query: 2812 SAFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKES 2991
            SAFWEKLEATPYLKTFLSLVREDKI EF                  VE+  TTL DFKE 
Sbjct: 901  SAFWEKLEATPYLKTFLSLVREDKITEFQAPEGDPKPVAPPVTHFPVEEPATTLDDFKEE 960

Query: 2992 LSDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
            L DKFDREIFT   GHTNCVQ DDPTTQL
Sbjct: 961  LQDKFDREIFTNDRGHTNCVQTDDPTTQL 989


>ref|NP_620836.1| replicase [Plantago asiatica mosaic virus]
 sp|Q07518.1|RDRP_P1AMV RecName: Full=RNA replication protein; AltName: Full=156 kDa protein;
            AltName: Full=ORF1 protein; Includes: RecName:
            Full=RNA-directed RNA polymerase; Includes: RecName:
            Full=Helicase
 emb|CAA79761.1| 156K-protein [Plantago asiatica mosaic virus]
          Length = 1385

 Score = 1536 bits (3978), Expect = 0.0
 Identities = 771/988 (78%), Positives = 826/988 (83%)
 Frame = +1

Query: 115  MSNVRNVFSQLTDPSLKAVIQDEAYRTLKRELAQTRHSNPFAQTPEAADALEALGINSHP 294
            MSNVRNVFSQLTDPSLKAVIQDEAYR LKRELAQTRH+NPFAQ+PEAADALEALGINSHP
Sbjct: 1    MSNVRNVFSQLTDPSLKAVIQDEAYRVLKRELAQTRHTNPFAQSPEAADALEALGINSHP 60

Query: 295  YAITPHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDFFLNAHV 474
            YAIT HTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGD FLNAHV
Sbjct: 61   YAITSHTHAAAKAIESDLYEVVSHYLPKENPVSFLFMKPAKLRFFHRGPTHGDHFLNAHV 120

Query: 475  EPKDVPRYPQDTVISRLENIPTNIAFMGDTLHFLSPSFVTALFAHSPKLQTLYATLVLPP 654
            EPKDVPRYPQ+T+I+RL +IPT IAFMGDTLHFLSPSF+TALFAHSP+LQTLYATLVLPP
Sbjct: 121  EPKDVPRYPQETIINRLADIPTQIAFMGDTLHFLSPSFLTALFAHSPRLQTLYATLVLPP 180

Query: 655  EALYRLRSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPNQPTITA 834
            E     RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAP  PT+TA
Sbjct: 181  EPSTS-RSLYPQIYTLTYSEDGFMYIPGGHAGASYFHKYDQLEWLTVGHLTAPGCPTVTA 239

Query: 835  QRLETKGANHLFIFQRGNYLTPERRTFTTTEHYVTVPDIFLPEKYNCRTPISKTIMMQMF 1014
            QRLETKGANHLFIFQRGNY+TPERRTF T + YVTVP IFLPE YNCRTPISKT MMQMF
Sbjct: 240  QRLETKGANHLFIFQRGNYITPERRTFATNDQYVTVPHIFLPENYNCRTPISKTTMMQMF 299

Query: 1015 FYIKSVKEAKERDIWAKFRQLISTKELQHYQPSEITLLVNYFEFTASLDSHTCFEDVLSG 1194
            FYIKS KEA+      + +QLISTKELQHYQPSEITLLVNYFEFTA+LDSHTCFEDV   
Sbjct: 300  FYIKSGKEAQREGHLGQVQQLISTKELQHYQPSEITLLVNYFEFTATLDSHTCFEDV-PP 358

Query: 1195 NLIQRLLRPLRSDIQRVLQFFRGRPSFVKLIKALDWQPITLEFPVRTVNTRLRGPPGFHN 1374
             L  +        I R+LQFFRGRPSFVKLIKALDWQPITLEFPVR V T +RGPPGF N
Sbjct: 359  KLAPKTTPAPPLGISRILQFFRGRPSFVKLIKALDWQPITLEFPVRDVRTTVRGPPGFKN 418

Query: 1375 PFTKPHPVNPDDADTMRAFREFXXXXXXXXXXXIADSLEGSAENLASHTSLKVGHADLST 1554
            PFT+P PVNP+DAD    F++F           +   LE SAE+   HT LKV  + LS 
Sbjct: 419  PFTQPQPVNPEDADISSRFQDFSRATNSTPKPTVEAVLEASAESPDHHTQLKVLCSALSE 478

Query: 1555 EQLRALHELGNTRLGGPLLPKITXXXXXXXXXXXXXXXXXXTQASASLNQGDHTDEAPVN 1734
             QL A+H LG++R GGPLLP++T                  +QAS + +     D  P  
Sbjct: 479  GQLEAIHALGHSRCGGPLLPELTAKSTPVEQCPDLPPCPTKSQASPASSNPSGPDAQPTA 538

Query: 1735 SDPATLPWVAWLPKLNALGFEALEIQTDPSTGEVIMPIADVRDLPKATLPEHWNEPGLSK 1914
             +P TLPWVAWLPKLNALGFEALE+Q DPSTGE+IMPI D ++LP+ATLP HW    L +
Sbjct: 539  QNPETLPWVAWLPKLNALGFEALEVQHDPSTGEMIMPITDTQELPRATLPAHWQGHNLER 598

Query: 1915 VLTTLRGLNRFPTPWCPDRARARAFTSDVKNSRTGKALHRETQTWKETQTMLTENVTANL 2094
            +L+TLR LNRFPTPW PDR RARAFTSDVKNSRTGKALHRE+QTWKETQTMLTEN    L
Sbjct: 599  ILSTLRSLNRFPTPWSPDRTRARAFTSDVKNSRTGKALHRESQTWKETQTMLTENTQTEL 658

Query: 2095 AISVIHGAGGSGKSQALQTLLRQNPELPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 2274
            AISVIHGAGGSGKSQALQTLLRQ+  LPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA
Sbjct: 659  AISVIHGAGGSGKSQALQTLLRQDHSLPIEVVLPTNELRLDWLKKLPHNPPEQFRTFERA 718

Query: 2275 FVCSKSPVVIFDDYGKLPQGYIEAFAMTHASLELVILTGDPRQSTHHEANEEALISKLAP 2454
            FV S SPVVIFDDYGKLPQGY+EAFA+THA+LELVILTGDPRQSTHHE+NEEALISKL P
Sbjct: 719  FVSSHSPVVIFDDYGKLPQGYLEAFALTHANLELVILTGDPRQSTHHESNEEALISKLPP 778

Query: 2455 ATTIFSELSRYYINATHRNSKFLANKLGVYSSNSCPLKVTYGFQPQPGMHLLVPSLMKKA 2634
            ATTI+S  SRYYINAT RNSKFLANKLGVYS+NSCPL VTYGFQP PG+HLLVPSLMKKA
Sbjct: 779  ATTIYSAFSRYYINATLRNSKFLANKLGVYSANSCPLNVTYGFQPLPGLHLLVPSLMKKA 838

Query: 2635 AFTDAGHKVSTYAGCQGITAPRVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNSNAQSS 2814
            AFTDAGHKVS+YAGCQGITAP+VQILLDNDTTMCTKEVLYTALSRAVDSIHFVN+NAQSS
Sbjct: 839  AFTDAGHKVSSYAGCQGITAPKVQILLDNDTTMCTKEVLYTALSRAVDSIHFVNTNAQSS 898

Query: 2815 AFWEKLEATPYLKTFLSLVREDKIEEFSXXXXXXXXXXXXXXXXXVEDKTTTLGDFKESL 2994
            AFWEKLEATPYLKTFLSLVREDKI EF                  VE+  TTL DFKE L
Sbjct: 899  AFWEKLEATPYLKTFLSLVREDKITEFQAPADAPKPVTPPVTHFPVEEPATTLDDFKEEL 958

Query: 2995 SDKFDREIFTEAHGHTNCVQGDDPTTQL 3078
             DKFDREIFT   GHTNCVQ DDPTTQL
Sbjct: 959  RDKFDREIFTSDRGHTNCVQTDDPTTQL 986