BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00030241
         (752 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_019074267.1| PREDICTED: uncharacterized protein LOC109122...   175   4e-49
ref|XP_024020247.1| uncharacterized protein LOC112091288 [Morus ...   171   2e-47
gb|PNX78102.1| retrovirus-related Pol polyprotein from transposo...   172   9e-47
gb|PNX61633.1| putative copia-type protein, partial [Trifolium p...   166   2e-46
emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]   175   2e-46
gb|PNX57823.1| retrovirus-related Pol polyprotein from transposo...   161   4e-46
ref|XP_019054242.1| PREDICTED: uncharacterized protein LOC109115...   167   7e-46
gb|PNY10826.1| putative copia-type protein [Trifolium pratense]       162   1e-45
gb|PNX77250.1| retrovirus-related Pol polyprotein from transposo...   168   1e-45
ref|XP_015889218.1| PREDICTED: uncharacterized mitochondrial pro...   162   2e-45
gb|KZV54184.1| hypothetical protein F511_36903 [Dorcoceras hygro...   169   2e-45
emb|CAN78448.1| hypothetical protein VITISV_026811 [Vitis vinifera]   166   4e-45
gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifo...   166   7e-45
ref|XP_015389233.1| PREDICTED: uncharacterized mitochondrial pro...   160   9e-45
ref|XP_017186356.1| PREDICTED: uncharacterized mitochondrial pro...   160   9e-45
ref|XP_016718619.1| PREDICTED: uncharacterized mitochondrial pro...   159   2e-44
gb|PNX92906.1| retrovirus-related Pol polyprotein from transposo...   170   2e-44
gb|PNY18109.1| retrovirus-related Pol polyprotein from transposo...   169   2e-44
gb|PNX68797.1| putative copia-type protein, partial [Trifolium p...   158   3e-44
gb|PON78095.1| LOW QUALITY PROTEIN: hypothetical protein TorRG33...   157   3e-44

>ref|XP_019074267.1| PREDICTED: uncharacterized protein LOC109122243 [Vitis vinifera]
          Length = 392

 Score =  175 bits (444), Expect = 4e-49
 Identities = 86/148 (58%), Positives = 112/148 (75%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSG CVFLG++LVSWSSKK  T SRSSTEAEYRSLA +T +++WLQSL+ ELQ     
Sbjct: 248 RSTSGHCVFLGKSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTM 307

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
           +P++W DN   +SL+ N V HSRTKH+ELD++F+REKVM + + V HVP+ DQV D+ TK
Sbjct: 308 VPVIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERKLVVNHVPTEDQVADVFTK 367

Query: 432 PLSGQFFVRLRNKLGVIPKGSIELRGAE 515
           PLS +FF +LR KL V    S++L+  +
Sbjct: 368 PLSFRFFDKLREKLTV---ASLDLKNGD 392


>ref|XP_024020247.1| uncharacterized protein LOC112091288 [Morus notabilis]
          Length = 395

 Score =  171 bits (433), Expect = 2e-47
 Identities = 81/147 (55%), Positives = 110/147 (74%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           +STSG CV+LG N+VSW SKK  T+SR +TEAEYRSLA+V   + WL SL+KEL++  + 
Sbjct: 245 KSTSGYCVYLGSNIVSWCSKKQHTISRLTTEAEYRSLANVVAKVTWLLSLLKELKVDIQT 304

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
            P+VW DN   + LA N V H+RTKH+ELD++F+REKV++K+I V+HVP++DQ  D+LTK
Sbjct: 305 RPVVWCDNLSTVQLAANPVLHARTKHVELDLYFVREKVIHKVIDVKHVPAIDQAADVLTK 364

Query: 432 PLSGQFFVRLRNKLGVIPKGSIELRGA 512
           P+S   F  LR+KL V    ++ LRGA
Sbjct: 365 PISSSKFPALRHKLKVESLSTLSLRGA 391


>gb|PNX78102.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 535

 Score =  172 bits (436), Expect = 9e-47
 Identities = 84/136 (61%), Positives = 109/136 (80%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSGSC++ G NLVSWSSKK P V+RSSTEAEYRS+A+ T D++W+QSL+ ELQI P  
Sbjct: 392 RSTSGSCIYFGSNLVSWSSKKQPLVARSSTEAEYRSMANTTADLLWIQSLLVELQI-PCH 450

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
           IP +  DN  A+SLA+N V HSRTKH+ELDIHF+REKV++K +++ HVP++DQ+ D LTK
Sbjct: 451 IPTLLCDNLSAVSLAHNPVLHSRTKHIELDIHFVREKVLSKKLNILHVPAVDQLADPLTK 510

Query: 432 PLSGQFFVRLRNKLGV 479
           PLS   +  +R+KL V
Sbjct: 511 PLSPNNYADIRSKLKV 526


>gb|PNX61633.1| putative copia-type protein, partial [Trifolium pratense]
          Length = 292

 Score =  166 bits (419), Expect = 2e-46
 Identities = 80/136 (58%), Positives = 104/136 (76%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSGSC++ G NL+SW S K P V+RSSTEAEYRS+A+ T D+IW+QSL+ ELQ+ P  
Sbjct: 149 RSTSGSCIYFGTNLISWGSXKQPLVARSSTEAEYRSMANTTADLIWIQSLLHELQV-PFH 207

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
            P +  DN  A+SLA+N + HSRTKH+ELDIHF+REKV++K +S+ HVP+ DQ+ D LTK
Sbjct: 208 TPTLLCDNLSAVSLAHNPILHSRTKHIELDIHFVREKVLSKQLSILHVPATDQLADPLTK 267

Query: 432 PLSGQFFVRLRNKLGV 479
           PLS   +  +R KL V
Sbjct: 268 PLSPANYGSIRTKLKV 283


>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score =  175 bits (444), Expect = 2e-46
 Identities = 86/148 (58%), Positives = 112/148 (75%)
 Frame = +3

Query: 72   RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
            RSTSG CVFLG++LVSWSSKK  T SRSSTEAEYRSLA +T +++WLQSL+ ELQ     
Sbjct: 1118 RSTSGHCVFLGKSLVSWSSKKQHTTSRSSTEAEYRSLASLTSEMLWLQSLLSELQTKMTM 1177

Query: 252  IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
            +P++W DN   +SL+ N V HSRTKH+ELD++F+REKVM + + V HVP+ DQV D+ TK
Sbjct: 1178 VPVIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERKLVVNHVPTEDQVADVFTK 1237

Query: 432  PLSGQFFVRLRNKLGVIPKGSIELRGAE 515
            PLS +FF +LR KL V    S++L+  +
Sbjct: 1238 PLSFRFFDKLREKLTV---ASLDLKNGD 1262


>gb|PNX57823.1| retrovirus-related Pol polyprotein from transposon TNT 1-94,
           partial [Trifolium pratense]
          Length = 190

 Score =  161 bits (408), Expect = 4e-46
 Identities = 75/133 (56%), Positives = 103/133 (77%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSGSC++ G NLVSW SKK   V+RSSTEAEYRS+A+ T +++W+QSL+ ELQ+ P  
Sbjct: 59  RSTSGSCIYFGSNLVSWGSKKQALVARSSTEAEYRSMANTTAELLWIQSLLHELQV-PYH 117

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
            P +  DN  A+SLA+N + H+RTKH+ELDIHF+REKV++K + V H+P++DQ+ D LTK
Sbjct: 118 TPTLLCDNLSAVSLAHNPILHARTKHIELDIHFVREKVLSKQLQVLHIPAIDQLADPLTK 177

Query: 432 PLSGQFFVRLRNK 470
           PLS   +  +R+K
Sbjct: 178 PLSPANYATIRSK 190


>ref|XP_019054242.1| PREDICTED: uncharacterized protein LOC109115063 [Nelumbo nucifera]
          Length = 411

 Score =  167 bits (423), Expect = 7e-46
 Identities = 83/163 (50%), Positives = 112/163 (68%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RST+G CV+LGENLVSWSSKK  T+SRSSTEAEYR +AH   ++ W+QSL++E+ +   +
Sbjct: 245 RSTTGFCVYLGENLVSWSSKKQHTISRSSTEAEYRGMAHAVAEVAWIQSLLREMNVTLRK 304

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
           +P++  DN  +I L+ N + HSRTKH+ELDIHF+REKV+ K + V HV S +QV D LTK
Sbjct: 305 VPLLLCDNLNSILLSANSILHSRTKHMELDIHFVREKVIRKELEVEHVTSTEQVADGLTK 364

Query: 432 PLSGQFFVRLRNKLGVIPKGSIELRGAENIDNMAGTLGSRLVK 560
           P+S   F  L+N+LGV        RG      + G + + LVK
Sbjct: 365 PVSSLRFELLKNRLGVRDLQKCAERGRTREVQITGGMLTELVK 407


>gb|PNY10826.1| putative copia-type protein [Trifolium pratense]
          Length = 245

 Score =  162 bits (410), Expect = 1e-45
 Identities = 79/136 (58%), Positives = 103/136 (75%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSGSC++ G NLV+W SKK P V+RSSTEAEYRS+A+ T ++IW+QSL+ ELQ+ P  
Sbjct: 104 RSTSGSCIYFGPNLVAWGSKKQPLVARSSTEAEYRSMANTTAELIWIQSLLHELQV-PYH 162

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
            P +  DN  A+SL++N V HSRTKH+ELD+HF+REKV+ K + V HVP+ DQ+ D LTK
Sbjct: 163 TPTLLCDNLSAVSLSHNPVLHSRTKHIELDLHFVREKVLAKHLHVLHVPATDQLADPLTK 222

Query: 432 PLSGQFFVRLRNKLGV 479
           PLS   +  +R KL V
Sbjct: 223 PLSPTNYATIRTKLKV 238


>gb|PNX77250.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Trifolium pratense]
          Length = 499

 Score =  168 bits (426), Expect = 1e-45
 Identities = 80/138 (57%), Positives = 106/138 (76%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSGSC++ G NLVSW SKK P V+RSSTEAEYRS+A+ T +++W+QSL++ELQ+ P  
Sbjct: 356 RSTSGSCIYFGSNLVSWGSKKQPLVARSSTEAEYRSMANTTAELLWIQSLLQELQV-PYH 414

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
           IP +  DN   +SLA+N + H+RTKH+ELDIHF+REKV++K + V HVP+ DQ+ D LTK
Sbjct: 415 IPTJLCDNISXVSLAHNPILHARTKHIELDIHFVREKVLSKQLQVLHVPTTDQLADPLTK 474

Query: 432 PLSGQFFVRLRNKLGVIP 485
           PLS   +  +R KL V P
Sbjct: 475 PLSPANYAVIRTKLKVFP 492


>ref|XP_015889218.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Ziziphus jujuba]
          Length = 249

 Score =  162 bits (409), Expect = 2e-45
 Identities = 76/137 (55%), Positives = 104/137 (75%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSG  +FLG NL+SW SKK   V+RSSTEAEYR+LAH+T ++ WLQ+L+KEL++    
Sbjct: 111 RSTSGYGIFLGPNLISWRSKKQQVVARSSTEAEYRALAHITSELCWLQNLIKELELQLP- 169

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
           IPIVW D+  A +LA N V H RTKH+E+D+HF+R+KV+ K + +R+VP+ DQ+ D+ TK
Sbjct: 170 IPIVWTDSLSAAALAENPVLHQRTKHIEIDMHFVRDKVLEKSLQIRYVPTRDQIADVFTK 229

Query: 432 PLSGQFFVRLRNKLGVI 482
            L    F+ L+NKLGV+
Sbjct: 230 SLGTSRFLYLKNKLGVV 246


>gb|KZV54184.1| hypothetical protein F511_36903 [Dorcoceras hygrometricum]
          Length = 544

 Score =  169 bits (427), Expect = 2e-45
 Identities = 82/146 (56%), Positives = 109/146 (74%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RS SG C FLG + +SWSSKK   VSRSSTEAEYRSLA+ T +++W++SL+ ELQ+    
Sbjct: 342 RSVSGFCWFLGGSPISWSSKKQSVVSRSSTEAEYRSLANATAELLWIRSLLTELQVSVPS 401

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
           IP++W DN   I+L+ N V H+RTKH+ELD+HF+REK+++ ++SVRHVPS DQ  DILTK
Sbjct: 402 IPLLWCDNLSTIALSANPVLHARTKHIELDLHFVREKILSNVLSVRHVPSFDQTADILTK 461

Query: 432 PLSGQFFVRLRNKLGVIPKGSIELRG 509
            LS   F+RLR+KL +     + LRG
Sbjct: 462 ALSAPSFLRLRSKLNMDCHPMMCLRG 487


>emb|CAN78448.1| hypothetical protein VITISV_026811 [Vitis vinifera]
          Length = 447

 Score =  166 bits (420), Expect = 4e-45
 Identities = 81/148 (54%), Positives = 111/148 (75%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSG CV LG++LVSWSSKK  T+S+SS EAEYRSLA +T +++WLQSL+ +LQ     
Sbjct: 303 RSTSGHCVCLGKSLVSWSSKKQHTISKSSIEAEYRSLASLTSEMLWLQSLLSKLQTKMTM 362

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
           +P++W DN   +SL+ N V HSRTKH+ELD++F+REKVM + + V HVP+ +QV D+ TK
Sbjct: 363 VPVIWCDNISTVSLSANPVLHSRTKHMELDLYFVREKVMERKLVVNHVPTENQVADVFTK 422

Query: 432 PLSGQFFVRLRNKLGVIPKGSIELRGAE 515
           PLS +FF +LR KL V    S++L+  +
Sbjct: 423 PLSFRFFDKLREKLTVT---SLDLKNGD 447


>gb|PNX88215.1| hypothetical protein L195_g044317, partial [Trifolium pratense]
          Length = 476

 Score =  166 bits (420), Expect = 7e-45
 Identities = 81/138 (58%), Positives = 106/138 (76%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSGSC+F G+NLVSW SKK   V+RSSTEAEYRS+A+ T +++W+QSL++ELQ+ P  
Sbjct: 335 RSTSGSCIFFGQNLVSWGSKKQQLVARSSTEAEYRSMANTTAELLWIQSLLQELQV-PFH 393

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
            P +  DN  A+SLA+N + HSRTKH+ELDIHF+REKV++K + V HVP+ DQ+ D LTK
Sbjct: 394 TPTLLCDNISAVSLAHNPILHSRTKHIELDIHFVREKVLSKHLHVLHVPASDQLADPLTK 453

Query: 432 PLSGQFFVRLRNKLGVIP 485
           PLS   +  +R KL V P
Sbjct: 454 PLSPSNYATIRVKLKVFP 471


>ref|XP_015389233.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Citrus sinensis]
          Length = 261

 Score =  160 bits (405), Expect = 9e-45
 Identities = 85/146 (58%), Positives = 104/146 (71%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           +S +G  V++G NLVSW SKK   VSRSSTEAEYR+LA  T + +W+Q+L+ EL+I    
Sbjct: 111 KSVAGYAVYIGSNLVSWCSKKQLVVSRSSTEAEYRALAQATSEAVWIQALLDELKIKLAA 170

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
            PI+W DNQ AI+LA N V H++TKH+ELDIHFIREKV  K I V+ VPS DQ  DILTK
Sbjct: 171 APIMWCDNQGAIALAYNPVYHAKTKHVELDIHFIREKVAAKKIVVQFVPSEDQTADILTK 230

Query: 432 PLSGQFFVRLRNKLGVIPKGSIELRG 509
           PL+   F  LR+KL V P G   LRG
Sbjct: 231 PLTFDQFHYLRSKLNVHP-GKFSLRG 255


>ref|XP_017186356.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Malus domestica]
          Length = 263

 Score =  160 bits (405), Expect = 9e-45
 Identities = 80/150 (53%), Positives = 107/150 (71%), Gaps = 2/150 (1%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSG C+FLG NL+SWS+KK PTV+RSSTEAEYRSLAH   +I W+  + K+L +H  +
Sbjct: 108 RSTSGYCIFLGSNLISWSAKKQPTVARSSTEAEYRSLAHTAAEITWICKVFKDLGLHLPQ 167

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
           +P +W DN  AISLA+N V H+RTKH+ELD H+IRE V+  ++ V++V S DQ+ DI TK
Sbjct: 168 VPSLWCDNLSAISLASNPVXHARTKHIELDYHYIRELVLANLLKVQYVCSHDQLADIHTK 227

Query: 432 PLSGQFFVRLRNKLGVIP--KGSIELRGAE 515
            LS   F+ L++KL + P       LRG +
Sbjct: 228 SLSKSRFLYLQSKLALGPFDASKFSLRGCK 257


>ref|XP_016718619.1| PREDICTED: uncharacterized mitochondrial protein AtMg00810-like
           [Gossypium hirsutum]
          Length = 244

 Score =  159 bits (402), Expect = 2e-44
 Identities = 79/144 (54%), Positives = 102/144 (70%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSG CVF G N +SWSS+K   VSRS+ EAEYRSLAHVT +I W++SL+ EL I    
Sbjct: 101 RSTSGFCVFFGGNPISWSSRKQKVVSRSTAEAEYRSLAHVTAEIAWIRSLLTELGIEVRS 160

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
             +VW D+  AI++ANN V HS+ KH+ELD+ F+REKV+N ++ V HV   +QV D+LTK
Sbjct: 161 KSLVWCDSSAAIAVANNPVMHSKFKHVELDLFFVREKVVNGLLQVGHVSGQEQVADVLTK 220

Query: 432 PLSGQFFVRLRNKLGVIPKGSIEL 503
           PLS   F + R KL VIP  S ++
Sbjct: 221 PLSAGQFEKFRKKLRVIPMESRDI 244


>gb|PNX92906.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1196

 Score =  170 bits (430), Expect = 2e-44
 Identities = 82/138 (59%), Positives = 105/138 (76%)
 Frame = +3

Query: 72   RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
            RSTSGSC+F G NLVSW SKK P V+RSSTEAEYRS+A+ T D++W+QSL+ E+ + P  
Sbjct: 1055 RSTSGSCIFFGSNLVSWGSKKQPLVARSSTEAEYRSMANTTADLMWIQSLLNEIHV-PYH 1113

Query: 252  IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
             P +  DN  A+SLA+N V HSRTKH+ELDIHF+REKV+ K + V HVP++DQ+ D LTK
Sbjct: 1114 TPTLLCDNLSAVSLAHNPVLHSRTKHIELDIHFVREKVLAKKLHVLHVPAIDQLADPLTK 1173

Query: 432  PLSGQFFVRLRNKLGVIP 485
            PLS   +  +R+KL V P
Sbjct: 1174 PLSPSNYATIRSKLKVFP 1191


>gb|PNY18109.1| retrovirus-related Pol polyprotein from transposon TNT 1-94
            [Trifolium pratense]
          Length = 1239

 Score =  169 bits (429), Expect = 2e-44
 Identities = 84/140 (60%), Positives = 108/140 (77%)
 Frame = +3

Query: 72   RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
            RSTSGSC++ G NLVSW SKK P V+RSSTEAEYRS+A+ T D++W+QSL++ELQ+ P  
Sbjct: 1101 RSTSGSCIYFGPNLVSWGSKKQPLVARSSTEAEYRSMANTTADLLWIQSLLRELQV-PFL 1159

Query: 252  IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
             P +  DN  A+SLA+N V HS+TKHLELDIHF+REKV++K ++V H+P+  Q+ D LTK
Sbjct: 1160 TPTLLCDNLSAVSLAHNPVLHSKTKHLELDIHFVREKVISKKLNVLHIPAGYQLADPLTK 1219

Query: 432  PLSGQFFVRLRNKLGVIPKG 491
            PLS   F  LR+KL V P G
Sbjct: 1220 PLSPASFASLRSKLKVFPLG 1239


>gb|PNX68797.1| putative copia-type protein, partial [Trifolium pratense]
          Length = 229

 Score =  158 bits (399), Expect = 3e-44
 Identities = 75/123 (60%), Positives = 99/123 (80%)
 Frame = +3

Query: 72  RSTSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPER 251
           RSTSGSC+F G NL+SW SKK   V+RSSTEAEYRS+A+ T +++W+QSL++ELQ+ P  
Sbjct: 104 RSTSGSCIFFGSNLISWGSKKQQLVARSSTEAEYRSMANTTAELLWIQSLLQELQV-PFX 162

Query: 252 IPIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTK 431
            P +  DN  A+SLA+N + HSRTKH+ELDIHF+REKV++K ++V HVP+ DQ+ D LTK
Sbjct: 163 TPTLLCDNISAVSLAHNPILHSRTKHIELDIHFVREKVLSKHLNVLHVPASDQLADPLTK 222

Query: 432 PLS 440
           PLS
Sbjct: 223 PLS 225


>gb|PON78095.1| LOW QUALITY PROTEIN: hypothetical protein TorRG33x02_239320 [Trema
           orientalis]
          Length = 206

 Score =  157 bits (397), Expect = 3e-44
 Identities = 76/155 (49%), Positives = 106/155 (68%)
 Frame = +3

Query: 75  STSGSCVFLGENLVSWSSKKLPTVSRSSTEAEYRSLAHVTCDIIWLQSLMKELQIHPERI 254
           STS   V+LG +L+SW S+K  TVSRSSTEAEYRSLA++  +I WLQSL+ EL++    +
Sbjct: 52  STSAYYVYLGPDLISWHSRKQHTVSRSSTEAEYRSLANIVAEITWLQSLLIELEVQQPSV 111

Query: 255 PIVWVDNQRAISLANNHVQHSRTKHLELDIHFIREKVMNKMISVRHVPSLDQVVDILTKP 434
           P++W DN   + L+ N +QH++TKH+E+D++F+REK M K I VR++ S DQV D+LTK 
Sbjct: 112 PVIWCDNLGTVLLSANPIQHAQTKHIEMDLYFVREKAMKKEIEVRYIHSQDQVADVLTKA 171

Query: 435 LSGQFFVRLRNKLGVIPKGSIELRGAENIDNMAGT 539
           +    F  LR KL V    ++ LRG    DN  G+
Sbjct: 172 VFSSLFPILRTKLRVEDCSTLSLRGHVRTDNKLGS 206