BLASTX nr result
ID: Rehmannia31_contig00029751
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Rehmannia31_contig00029751
(396 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_011071203.1| probable pre-mRNA-splicing factor ATP-depend... 87 4e-17
gb|PIN24636.1| DEAH-box RNA helicase [Handroanthus impetiginosus] 85 1e-16
gb|EYU42108.1| hypothetical protein MIMGU_mgv1a023664mg [Erythra... 75 4e-13
ref|XP_012831691.1| PREDICTED: LOW QUALITY PROTEIN: putative pre... 75 4e-13
ref|XP_022846525.1| probable pre-mRNA-splicing factor ATP-depend... 68 2e-10
ref|XP_022846526.1| probable pre-mRNA-splicing factor ATP-depend... 63 6e-09
ref|XP_022846524.1| probable pre-mRNA-splicing factor ATP-depend... 63 6e-09
ref|XP_019077453.1| PREDICTED: probable pre-mRNA-splicing factor... 60 7e-08
ref|XP_019077446.1| PREDICTED: probable pre-mRNA-splicing factor... 60 8e-08
ref|XP_010655421.1| PREDICTED: probable pre-mRNA-splicing factor... 60 8e-08
ref|XP_002266642.1| PREDICTED: probable pre-mRNA-splicing factor... 60 8e-08
emb|CBI27579.3| unnamed protein product, partial [Vitis vinifera] 60 8e-08
ref|XP_015957988.1| probable pre-mRNA-splicing factor ATP-depend... 60 1e-07
ref|XP_016191106.1| probable pre-mRNA-splicing factor ATP-depend... 59 1e-07
ref|XP_007158704.1| hypothetical protein PHAVU_002G175400g [Phas... 58 5e-07
ref|XP_024193659.1| probable pre-mRNA-splicing factor ATP-depend... 57 7e-07
ref|XP_003524885.1| PREDICTED: putative pre-mRNA-splicing factor... 57 9e-07
gb|KHN34807.1| ATP-dependent RNA helicase dhx8 [Glycine soja] 57 9e-07
ref|XP_011041544.1| PREDICTED: putative pre-mRNA-splicing factor... 57 1e-06
ref|XP_002314547.1| RNA helicase family protein [Populus trichoc... 57 1e-06
>ref|XP_011071203.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
[Sesamum indicum]
Length = 701
Score = 86.7 bits (213), Expect = 4e-17
Identities = 38/57 (66%), Positives = 52/57 (91%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGKAN 171
+N+ KLSGG ++SHE+++T+N+NLPKDDA V +P+DD+ESR++AARERFLARS KAN
Sbjct: 644 INVRKLSGGGSQSHEEIQTENLNLPKDDAGVPQPLDDRESRILAARERFLARSRKAN 700
>gb|PIN24636.1| DEAH-box RNA helicase [Handroanthus impetiginosus]
Length = 705
Score = 85.1 bits (209), Expect = 1e-16
Identities = 38/54 (70%), Positives = 49/54 (90%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSG 162
+NIAKLSGG ++SHEKV+ +N+NLPKDDA+V PVDD+ES+++AARERFLAR G
Sbjct: 649 INIAKLSGGISQSHEKVQKENINLPKDDANVADPVDDRESKILAARERFLARRG 702
>gb|EYU42108.1| hypothetical protein MIMGU_mgv1a023664mg [Erythranthe guttata]
Length = 654
Score = 75.1 bits (183), Expect = 4e-13
Identities = 38/59 (64%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDD--ADVTRPVDDQESRVIAARERFLARSGKAN 171
LNI+KLSGGT S EKVE++ ++LPKDD AD + +DD+ESR++AARERFLARS KA+
Sbjct: 595 LNISKLSGGTRLSDEKVESETLDLPKDDNNADAAQALDDRESRILAARERFLARSAKAS 653
>ref|XP_012831691.1| PREDICTED: LOW QUALITY PROTEIN: putative pre-mRNA-splicing factor
ATP-dependent RNA helicase PRP1 [Erythranthe guttata]
Length = 702
Score = 75.1 bits (183), Expect = 4e-13
Identities = 38/59 (64%), Positives = 49/59 (83%), Gaps = 2/59 (3%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDD--ADVTRPVDDQESRVIAARERFLARSGKAN 171
LNI+KLSGGT S EKVE++ ++LPKDD AD + +DD+ESR++AARERFLARS KA+
Sbjct: 643 LNISKLSGGTRLSDEKVESETLDLPKDDNNADAAQALDDRESRILAARERFLARSAKAS 701
>ref|XP_022846525.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
isoform X2 [Olea europaea var. sylvestris]
Length = 699
Score = 67.8 bits (164), Expect = 2e-10
Identities = 28/55 (50%), Positives = 43/55 (78%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LN++KLSGGT++SHE+ + +N +LP +D+ T+P DD R++AARER+L+R K
Sbjct: 644 LNVSKLSGGTSKSHEQTQVENSHLPNEDSFTTQPPDDHNERILAARERYLSRKAK 698
>ref|XP_022846526.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
isoform X3 [Olea europaea var. sylvestris]
Length = 623
Score = 63.2 bits (152), Expect = 6e-09
Identities = 28/56 (50%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 LNIAKLS-GGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LN++KLS GGT++SHE+ + +N +LP +D+ T+P DD R++AARER+L+R K
Sbjct: 567 LNVSKLSSGGTSKSHEQTQVENSHLPNEDSFTTQPPDDHNERILAARERYLSRKAK 622
>ref|XP_022846524.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
isoform X1 [Olea europaea var. sylvestris]
Length = 700
Score = 63.2 bits (152), Expect = 6e-09
Identities = 28/56 (50%), Positives = 43/56 (76%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 LNIAKLS-GGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LN++KLS GGT++SHE+ + +N +LP +D+ T+P DD R++AARER+L+R K
Sbjct: 644 LNVSKLSSGGTSKSHEQTQVENSHLPNEDSFTTQPPDDHNERILAARERYLSRKAK 699
>ref|XP_019077453.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH4 isoform X6 [Vitis vinifera]
Length = 561
Score = 60.1 bits (144), Expect = 7e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LNI KLSGG+N+ ++ E ++ + PK DV RP +D ESR+ AAR+RF+AR K
Sbjct: 506 LNINKLSGGSNQVEDRTEEKSSDSPKKSVDVARPPNDAESRIQAARDRFMARKAK 560
>ref|XP_019077446.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH4 isoform X3 [Vitis vinifera]
Length = 639
Score = 60.1 bits (144), Expect = 8e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LNI KLSGG+N+ ++ E ++ + PK DV RP +D ESR+ AAR+RF+AR K
Sbjct: 584 LNINKLSGGSNQVEDRTEEKSSDSPKKSVDVARPPNDAESRIQAARDRFMARKAK 638
>ref|XP_010655421.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH4 isoform X2 [Vitis vinifera]
Length = 671
Score = 60.1 bits (144), Expect = 8e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LNI KLSGG+N+ ++ E ++ + PK DV RP +D ESR+ AAR+RF+AR K
Sbjct: 616 LNINKLSGGSNQVEDRTEEKSSDSPKKSVDVARPPNDAESRIQAARDRFMARKAK 670
>ref|XP_002266642.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH4 isoform X1 [Vitis vinifera]
ref|XP_010655417.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
helicase DEAH4 isoform X1 [Vitis vinifera]
Length = 700
Score = 60.1 bits (144), Expect = 8e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LNI KLSGG+N+ ++ E ++ + PK DV RP +D ESR+ AAR+RF+AR K
Sbjct: 645 LNINKLSGGSNQVEDRTEEKSSDSPKKSVDVARPPNDAESRIQAARDRFMARKAK 699
>emb|CBI27579.3| unnamed protein product, partial [Vitis vinifera]
Length = 704
Score = 60.1 bits (144), Expect = 8e-08
Identities = 28/55 (50%), Positives = 39/55 (70%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LNI KLSGG+N+ ++ E ++ + PK DV RP +D ESR+ AAR+RF+AR K
Sbjct: 649 LNINKLSGGSNQVEDRTEEKSSDSPKKSVDVARPPNDAESRIQAARDRFMARKAK 703
>ref|XP_015957988.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
[Arachis duranensis]
ref|XP_020995170.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
[Arachis duranensis]
Length = 695
Score = 59.7 bits (143), Expect = 1e-07
Identities = 31/55 (56%), Positives = 38/55 (69%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
L++ KLSGGT E+ E +LPK + +VT VDD ESR+ AARERFLAR GK
Sbjct: 640 LDVYKLSGGTGPVEEENERNVPDLPKKNVEVTAGVDDSESRIQAARERFLARKGK 694
>ref|XP_016191106.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
[Arachis ipaensis]
ref|XP_020975665.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
[Arachis ipaensis]
Length = 699
Score = 59.3 bits (142), Expect = 1e-07
Identities = 31/55 (56%), Positives = 37/55 (67%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
L++ KLSGGT E+ E +LPK +VT VDD ESR+ AARERFLAR GK
Sbjct: 644 LDVYKLSGGTGPVEEETERNVPDLPKKIVEVTAGVDDSESRIQAARERFLARKGK 698
>ref|XP_007158704.1| hypothetical protein PHAVU_002G175400g [Phaseolus vulgaris]
gb|ESW30698.1| hypothetical protein PHAVU_002G175400g [Phaseolus vulgaris]
Length = 696
Score = 57.8 bits (138), Expect = 5e-07
Identities = 29/55 (52%), Positives = 37/55 (67%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
L++ KLSGG + E+ E +LPK D +V DD+ESR+ AARERFLAR GK
Sbjct: 641 LDVYKLSGGIHHVEEEPEKNLPDLPKKDVEVASTADDRESRIQAARERFLARKGK 695
>ref|XP_024193659.1| probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4
[Rosa chinensis]
gb|PRQ39962.1| putative RNA helicase [Rosa chinensis]
Length = 699
Score = 57.4 bits (137), Expect = 7e-07
Identities = 33/55 (60%), Positives = 37/55 (67%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LNI KLSGG+ E E +LPK DA VT DDQES++ AARERFLAR GK
Sbjct: 645 LNINKLSGGSGHIEEHAEGNISDLPKKDA-VTAVPDDQESKIQAARERFLARKGK 698
>ref|XP_003524885.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 [Glycine max]
gb|KRH58750.1| hypothetical protein GLYMA_05G146100 [Glycine max]
Length = 696
Score = 57.0 bits (136), Expect = 9e-07
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
L++ KLSGG + E+ E + + PK D +V DD+ESR+ AARERFLAR GK
Sbjct: 641 LDVYKLSGGVHHVEEEPEKKLPDFPKKDVEVASTADDRESRIQAARERFLARKGK 695
>gb|KHN34807.1| ATP-dependent RNA helicase dhx8 [Glycine soja]
Length = 700
Score = 57.0 bits (136), Expect = 9e-07
Identities = 28/55 (50%), Positives = 37/55 (67%)
Frame = +1
Query: 1 LNIAKLSGGTNESHEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
L++ KLSGG + E+ E + + PK D +V DD+ESR+ AARERFLAR GK
Sbjct: 645 LDVYKLSGGVHHVEEEPEKKLPDFPKKDVEVASTADDRESRIQAARERFLARKGK 699
>ref|XP_011041544.1| PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP1 isoform X4 [Populus euphratica]
Length = 566
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 LNIAKLSGGTNES-HEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LNI KLSGG+ S E+ ET+ +LPK + VT DD+ESR+ AAR+RFLAR GK
Sbjct: 510 LNIDKLSGGSGHSIREESETKVSSLPKKEEAVTGVPDDRESRIQAARDRFLARKGK 565
>ref|XP_002314547.1| RNA helicase family protein [Populus trichocarpa]
gb|PNT14939.1| hypothetical protein POPTR_010G057200v3 [Populus trichocarpa]
Length = 699
Score = 56.6 bits (135), Expect = 1e-06
Identities = 32/56 (57%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +1
Query: 1 LNIAKLSGGTNES-HEKVETQNVNLPKDDADVTRPVDDQESRVIAARERFLARSGK 165
LNI KLSGG+ S E+ ET+ +LPK + VT DD+ESR+ AAR+RFLAR GK
Sbjct: 643 LNIDKLSGGSGHSIREESETKVSSLPKKEEAVTGVPDDRESRIQAARDRFLARKGK 698