BLASTX nr result

ID: Rehmannia31_contig00029062 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00029062
         (397 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454...    38   2e-06

>ref|XP_008391838.1| PREDICTED: uncharacterized protein LOC103454030 [Malus domestica]
          Length = 1374

 Score = 37.7 bits (86), Expect(3) = 2e-06
 Identities = 17/30 (56%), Positives = 20/30 (66%)
 Frame = +2

Query: 17  VGGPFTISQLKEAIKLHLPDIVFLSETKKK 106
           +GG  T+  L EA +LH PDIV L ETK K
Sbjct: 11  IGGDLTVDNLLEANRLHTPDIVILLETKNK 40



 Score = 36.6 bits (83), Expect(3) = 2e-06
 Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
 Frame = +1

Query: 163 VDPIGKSGGLLILWSVNIVVSEIICSNFCVE--VCFEIKGSLDKCWAIF-VYASTDGGER 333
           V P G SGGL + W     V+ +   NF +E  +  EI   L+K W +F +YASTD  +R
Sbjct: 59  VXPHGLSGGLCVFWKDGSQVTLLKSENFVIEMKIWDEI---LNKQWRLFAIYASTDEKKR 115

Query: 334 RLQ 342
           + Q
Sbjct: 116 KDQ 118



 Score = 23.9 bits (50), Expect(3) = 2e-06
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 3  WNCRGLGGPL 32
          WNC+G+GG L
Sbjct: 6  WNCQGIGGDL 15


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