BLASTX nr result

ID: Rehmannia31_contig00028670 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00028670
         (579 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PPS10666.1| hypothetical protein GOBAR_AA09977 [Gossypium bar...    57   3e-06
gb|PPE01735.1| hypothetical protein GOBAR_DD01235 [Gossypium bar...    57   3e-06

>gb|PPS10666.1| hypothetical protein GOBAR_AA09977 [Gossypium barbadense]
          Length = 300

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 121 IFEQLLLDWLIQYTTIRYELGRQPANTKLSSNKTVRRVRV 2
           I E L+ D  ++  T RYELGRQPANTKLSSNKTVRR+RV
Sbjct: 45  IMEGLMFDLFLEGGTERYELGRQPANTKLSSNKTVRRIRV 84


>gb|PPE01735.1| hypothetical protein GOBAR_DD01235 [Gossypium barbadense]
          Length = 304

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/40 (70%), Positives = 32/40 (80%)
 Frame = -3

Query: 121 IFEQLLLDWLIQYTTIRYELGRQPANTKLSSNKTVRRVRV 2
           I E L+ D  ++  T RYELGRQPANTKLSSNKTVRR+RV
Sbjct: 95  IMEGLMFDLFLEGGTERYELGRQPANTKLSSNKTVRRIRV 134


Top