BLASTX nr result

ID: Rehmannia31_contig00024488 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00024488
         (725 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN02175.1| hypothetical protein CDL12_25320 [Handroanthus im...    79   5e-15
ref|XP_022899269.1| putative RING-H2 finger protein ATL21A [Olea...    66   6e-09
ref|XP_022871454.1| putative RING-H2 finger protein ATL69 [Olea ...    64   1e-08
gb|PIN13893.1| Anaphase-promoting complex (APC), subunit 11 [Han...    65   2e-08
ref|XP_020553385.1| RING-H2 finger protein ATL20-like isoform X2...    59   3e-06
ref|XP_011093099.2| RING-H2 finger protein ATL20-like isoform X1...    59   3e-06

>gb|PIN02175.1| hypothetical protein CDL12_25320 [Handroanthus impetiginosus]
          Length = 113

 Score = 78.6 bits (192), Expect = 5e-15
 Identities = 48/95 (50%), Positives = 57/95 (60%)
 Frame = -1

Query: 287 CCIQKVDNFTRQRENAIARQSITAQTRIISTILSTARLSPPNGYATTGLDDSKIKSCSEL 108
           CCIQ  DNF  +RE  +  QS  +Q  I +T  S      PN     GLD S + SCSEL
Sbjct: 14  CCIQTFDNF--RREGTVTNQSTISQATIFNTETS------PN----IGLDHSILNSCSEL 61

Query: 107 VILDLNENGSISGICENYSCPICLEGYCDKEKVRR 3
           V+LD+NE+  I G+ EN  C ICLEGY  KEKVRR
Sbjct: 62  VVLDINED-QILGLGENICCSICLEGYKAKEKVRR 95


>ref|XP_022899269.1| putative RING-H2 finger protein ATL21A [Olea europaea var.
           sylvestris]
          Length = 386

 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 6/135 (4%)
 Frame = -1

Query: 392 GAGGWRLKVMTKFFAFLLMIPAIAILVMVLFVWITCCIQKVDNFTRQRENAIARQSITAQ 213
           G  G R K ++KF A  + +P I I+    F  +  C+Q + N  R +       +    
Sbjct: 210 GTDGSRSK-LSKFLALAISMPGIVIIST--FCCLASCMQ-LFNLVRDKFGLFGTGAPPQA 265

Query: 212 TRIISTILSTARLSPPNGYATT------GLDDSKIKSCSELVILDLNENGSISGICENYS 51
               S +   A + P +    T      GLDDSKIKSC+ELV+  LNE  SISG  E+ +
Sbjct: 266 NMFPSIVPPQATMFPGDAPPQTTSSVPIGLDDSKIKSCTELVV--LNEGQSISG-SESNA 322

Query: 50  CPICLEGYCDKEKVR 6
           CPICLEGY  +E VR
Sbjct: 323 CPICLEGYRPEETVR 337


>ref|XP_022871454.1| putative RING-H2 finger protein ATL69 [Olea europaea var.
           sylvestris]
          Length = 193

 Score = 63.5 bits (153), Expect = 1e-08
 Identities = 49/127 (38%), Positives = 70/127 (55%), Gaps = 4/127 (3%)
 Frame = -1

Query: 371 KVMTKFFAFLLMIPAIAILVMVLFVWITCCIQKVDNFTRQRENAIARQSITAQTRI---- 204
           +++T   + L ++  + +++++L  W+     +V    R   NA A  + TA   +    
Sbjct: 40  RLITYLKSPLFILSFLLLVLLLLPCWVRLIKMRV---RRNEANASADHNSTATAALSQST 96

Query: 203 ISTILSTARLSPPNGYATTGLDDSKIKSCSELVILDLNENGSISGICENYSCPICLEGYC 24
           I TIL    L P  G    GLDDSKIKS +ELV+++  EN SISG   N SC ICLE Y 
Sbjct: 97  IPTILPQPMLQP--GPVILGLDDSKIKSYTELVVVE--ENQSISG-KGNSSCVICLEAYN 151

Query: 23  DKEKVRR 3
            +EKVRR
Sbjct: 152 PEEKVRR 158


>gb|PIN13893.1| Anaphase-promoting complex (APC), subunit 11 [Handroanthus
           impetiginosus]
          Length = 387

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 6/206 (2%)
 Frame = -1

Query: 605 GLSTSEVSVSWFDTYDFDG--NSSNLVLTWY--VCLSAKIILSEKVQGRLSEGSCCI*AC 438
           G+ +  + VS     D  G  + ++L+LTW+  VC   K        G    G+C I   
Sbjct: 162 GIGSWRIPVSGPKEVDDGGFYDENSLILTWHENVCKDCK--------GNQQSGTCGIQRD 213

Query: 437 FSPLDIYWWMYVRIIG-AGGWRLKVMTKFFAFLLMIPAIAILVMVLFVWITCCIQKVDNF 261
            + L     +  ++ G   G R K + K  A  L +PA+ I      + ++CC     + 
Sbjct: 214 STCLHRMIRLGGQVSGNPRGPRPKPIAKIIAIALSMPALII------IGLSCCSVFCFHL 267

Query: 260 TRQRENAIARQSITAQTRIISTILSTARLSPPNGYAT-TGLDDSKIKSCSELVILDLNEN 84
            +   +      + A T + S   +     PP    T TGLD+SKI +C+E+V+L  N+ 
Sbjct: 268 MKMIGDKQEANPLAAPTTLASPPTTVGTPVPPLSITTNTGLDESKITACTEIVVLSENDE 327

Query: 83  GSISGICENYSCPICLEGYCDKEKVR 6
           G  SG     +C ICLE YC  E +R
Sbjct: 328 GIPSG--NGNTCSICLENYCKIETIR 351


>ref|XP_020553385.1| RING-H2 finger protein ATL20-like isoform X2 [Sesamum indicum]
          Length = 370

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 35/122 (28%), Positives = 62/122 (50%)
 Frame = -1

Query: 371 KVMTKFFAFLLMIPAIAILVMVLFVWITCCIQKVDNFTRQRENAIARQSITAQTRIISTI 192
           K +TK  A    +P + I     F      + ++     + ++A A  + +  T    T 
Sbjct: 216 KSLTKIVAMASSLPVLIITAFSCFSVFCLHLLRMIREKYEADSASAAAATSTTTPTPQTT 275

Query: 191 LSTARLSPPNGYATTGLDDSKIKSCSELVILDLNENGSISGICENYSCPICLEGYCDKEK 12
           + T  +  P+  + TGLD+SKI +C+E+++L  +++G       N +C ICLE YC+KE 
Sbjct: 276 MVTI-MPLPSTTSNTGLDESKIMACTEIIVL--SDSGETIPSGNNNTCSICLENYCEKET 332

Query: 11  VR 6
           +R
Sbjct: 333 IR 334


>ref|XP_011093099.2| RING-H2 finger protein ATL20-like isoform X1 [Sesamum indicum]
          Length = 482

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 35/122 (28%), Positives = 62/122 (50%)
 Frame = -1

Query: 371 KVMTKFFAFLLMIPAIAILVMVLFVWITCCIQKVDNFTRQRENAIARQSITAQTRIISTI 192
           K +TK  A    +P + I     F      + ++     + ++A A  + +  T    T 
Sbjct: 328 KSLTKIVAMASSLPVLIITAFSCFSVFCLHLLRMIREKYEADSASAAAATSTTTPTPQTT 387

Query: 191 LSTARLSPPNGYATTGLDDSKIKSCSELVILDLNENGSISGICENYSCPICLEGYCDKEK 12
           + T  +  P+  + TGLD+SKI +C+E+++L  +++G       N +C ICLE YC+KE 
Sbjct: 388 MVTI-MPLPSTTSNTGLDESKIMACTEIIVL--SDSGETIPSGNNNTCSICLENYCEKET 444

Query: 11  VR 6
           +R
Sbjct: 445 IR 446


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