BLASTX nr result

ID: Rehmannia31_contig00020773 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00020773
         (336 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PIN19200.1| Calmodulin and related proteins (EF-Hand superfam...    69   7e-12
ref|XP_016690950.1| PREDICTED: calmodulin-like protein 1 [Gossyp...    54   2e-06
ref|XP_012469534.1| PREDICTED: calmodulin-like protein 1 [Gossyp...    54   2e-06
ref|XP_011078048.2| calmodulin-like protein 1 [Sesamum indicum]        53   7e-06

>gb|PIN19200.1| Calmodulin and related proteins (EF-Hand superfamily) [Handroanthus
           impetiginosus]
          Length = 189

 Score = 68.6 bits (166), Expect = 7e-12
 Identities = 44/115 (38%), Positives = 57/115 (49%), Gaps = 15/115 (13%)
 Frame = +1

Query: 31  MSKLTFLSFHGSISRXXXXXXXXXXXXXXSKEIKNP--------QPNREELKNIFNKFDA 186
           MS+ +FLSF+ S S+              SKE++ P        QP  EELK IFNKFD 
Sbjct: 1   MSRFSFLSFNRSSSKKPSTPKPPAINHTRSKELQKPPSIQSKNLQPKIEELKTIFNKFDT 60

Query: 187 DGDGKISIDEYNRTLEIL-------XXXXXXXXXXXXXXXFIDLEEFRKVCSGDG 330
           +GDGKIS++EY + L+I+                      FI+ EEF KV S DG
Sbjct: 61  NGDGKISLEEYKQALKIIGGATTKNEAAQAFRAADADGDGFIEFEEFSKVFSTDG 115


>ref|XP_016690950.1| PREDICTED: calmodulin-like protein 1 [Gossypium hirsutum]
          Length = 184

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +1

Query: 31  MSKLTFLSF-HGSISRXXXXXXXXXXXXXXSKEIKNPQPNREELKNIFNKFDADGDGKIS 207
           MSKL+F+ F +GS+ R              S  + + QPN EE+K +FNKFD + DGKIS
Sbjct: 1   MSKLSFIEFKYGSLKRPTDQLNSINKTRQSSSNMSSYQPNMEEMKWVFNKFDTNKDGKIS 60

Query: 208 IDEYNRTLEIL 240
             EY   ++++
Sbjct: 61  KQEYKSAMKMM 71


>ref|XP_012469534.1| PREDICTED: calmodulin-like protein 1 [Gossypium raimondii]
 gb|KJB17907.1| hypothetical protein B456_003G023100 [Gossypium raimondii]
 gb|PPD96859.1| hypothetical protein GOBAR_DD06127 [Gossypium barbadense]
          Length = 184

 Score = 54.3 bits (129), Expect = 2e-06
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
 Frame = +1

Query: 31  MSKLTFLSF-HGSISRXXXXXXXXXXXXXXSKEIKNPQPNREELKNIFNKFDADGDGKIS 207
           MSKL+F+ F +GS+ R              S  + + QPN EE+K +FNKFD + DGKIS
Sbjct: 1   MSKLSFIEFKYGSLKRPTDQLNSINKTRQSSSNMSSYQPNMEEMKWVFNKFDTNKDGKIS 60

Query: 208 IDEYNRTLEIL 240
             EY   ++++
Sbjct: 61  KQEYKSAMKMM 71


>ref|XP_011078048.2| calmodulin-like protein 1 [Sesamum indicum]
          Length = 200

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 33/86 (38%), Positives = 44/86 (51%), Gaps = 14/86 (16%)
 Frame = +1

Query: 121 KEIKNP------QPNREELKNIFNKFDADGDGKISIDEYNRTLEIL--------XXXXXX 258
           KEI+ P         ++E + IF+KFD +GDGKIS++EY + L++L              
Sbjct: 44  KEIQKPPSFQTRSSFQDETRRIFDKFDTNGDGKISLEEYKQALKVLGGGATTTAEAAKSF 103

Query: 259 XXXXXXXXXFIDLEEFRKVCSGDGEA 336
                    FIDLEEF KV S DG A
Sbjct: 104 RVADADGDGFIDLEEFSKVYSSDGGA 129


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