BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00012217
         (556 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KYP38667.1| Retrovirus-related Pol polyprotein from transposo...   156   2e-41
gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposo...   158   3e-41
gb|KYP64043.1| Retrovirus-related Pol polyprotein from transposo...   145   4e-39
emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]   150   7e-39
dbj|BAT97420.1| hypothetical protein VIGAN_09086300 [Vigna angul...   145   1e-38
gb|KYP40135.1| Retrovirus-related Pol polyprotein from transposo...   144   2e-38
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]           149   2e-38
gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposo...   149   4e-38
gb|PHU21416.1| hypothetical protein BC332_06523 [Capsicum chinense]   147   5e-38
gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinen...   148   6e-38
ref|XP_016647234.1| PREDICTED: retrovirus-related Pol polyprotei...   142   2e-37
gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]      146   3e-37
gb|KYP60452.1| Retrovirus-related Pol polyprotein from transposo...   138   4e-36
emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]   143   5e-36
gb|KYP64759.1| Retrovirus-related Pol polyprotein from transposo...   137   1e-35
gb|KYP44187.1| Retrovirus-related Pol polyprotein from transposo...   136   2e-35
gb|OMO59210.1| Integrase, catalytic core [Corchorus capsularis]       140   3e-35
emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]   140   4e-35
gb|PKI48613.1| hypothetical protein CRG98_031032 [Punica granatum]    136   9e-35
emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]   138   1e-34

>gb|KYP38667.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 603

 Score =  156 bits (395), Expect = 2e-41
 Identities = 82/190 (43%), Positives = 123/190 (64%), Gaps = 6/190 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAES-SQALAVESRGRHKGND-- 384
           S+ET  VS++NSAP+G++++   K+   NEE RR  QG+ S S+ L  E+RGR +  +  
Sbjct: 153 SWETFRVSITNSAPNGVVSLQAAKSGALNEEMRRKAQGSSSQSEVLITENRGRSQKKELK 212

Query: 383 --RDKGKGGSKSRDPR-KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSA 213
             R+K +  SKSR    +CYYCNKPGH+ K+C+  K+ E   KK  QK+ D D++   +A
Sbjct: 213 GSREKSRSKSKSRYKNVECYYCNKPGHIQKNCFLWKK-ENKGKKGKQKEKDHDDDRVATA 271

Query: 212 TVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGN 33
           T    GD+V+LS   H  +++ S ++ W+IDS A+ H TP KEFF++Y  GDFG +K GN
Sbjct: 272 TC---GDLVILSD--HGLINLVSDESMWIIDSGATLHVTPRKEFFTSYTSGDFGVLKMGN 326

Query: 32  NNKASIVGVG 3
           +  + ++GVG
Sbjct: 327 DGVSKVIGVG 336


>gb|KYP66486.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1321

 Score =  158 bits (399), Expect = 3e-41
 Identities = 78/184 (42%), Positives = 111/184 (60%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESSQALAVESRGRHKGNDRDK 375
           S++TLVVSLSNSAP+G ++++MV+NS+ NEE RR       + AL  E R R K      
Sbjct: 154 SWDTLVVSLSNSAPEGKVSLNMVRNSILNEEIRRRDVAKNETHALVTERRSRSKSRTPRG 213

Query: 374 GKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVFPDG 195
            +  SKSR+ R CY C KPGH+ K+C   K++  D+ +         N+ +T+AT     
Sbjct: 214 HRDHSKSRERRSCYNCGKPGHLKKNCRFLKKEIQDKNQA--------NDRNTAATTSASD 265

Query: 194 DVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNKASI 15
           D + L   +  C H+A  D  W+IDSAAS+H  P +E+F+TY+ GDFG V  GN + + I
Sbjct: 266 DEITLLCNQGECCHIAEPDEEWIIDSAASYHCVPKREYFTTYRKGDFGHVNMGNKSTSQI 325

Query: 14  VGVG 3
           VG+G
Sbjct: 326 VGIG 329


>gb|KYP64043.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 336

 Score =  145 bits (366), Expect = 4e-39
 Identities = 81/184 (44%), Positives = 116/184 (63%), Gaps = 10/184 (5%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESS----QALAVESRGR---- 399
           + ET VVS SNS P+G LT +MVK+SL NEETRR GQG  SS    + L VES G+    
Sbjct: 144 NLETWVVSRSNSTPNGKLTFNMVKDSLLNEETRRKGQGMASSSTHNEVLVVESSGKSHQR 203

Query: 398 --HKGNDRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEE 225
             H+ N+R+K KG S +R   KC+YCNK GH++K+C   K+D+   K  ++K    +++ 
Sbjct: 204 NSHRYNNRNKLKGKSMTRKDIKCFYCNKMGHLMKECKFLKRDKSRVKGKDKK----EDKA 259

Query: 224 DTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTV 45
             + T+  +G+VV++  +  N +++A     WVID A SFH TP  E+F++Y +GDFG V
Sbjct: 260 KGTTTIVSNGEVVIVYDD--NSINLACQVYEWVIDFATSFHVTPYCEYFTSYNVGDFGRV 317

Query: 44  KFGN 33
             GN
Sbjct: 318 NMGN 321


>emb|CAN77158.1| hypothetical protein VITISV_019025 [Vitis vinifera]
          Length = 788

 Score =  150 bits (380), Expect = 7e-39
 Identities = 79/190 (41%), Positives = 119/190 (62%), Gaps = 7/190 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESS-QALAVESRGRHKGN--- 387
           S+ETLVVSLSNS P+G++T++MVK+++FNEE +R   G  S+ +AL  E RGR K     
Sbjct: 21  SWETLVVSLSNSTPNGVITINMVKDNMFNEEAKRKKLGISSNTEALVTERRGRSKSRKPS 80

Query: 386 ---DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTS 216
              + DK +G SKS+   KC YC+KPGH+ ++C K K+++  +K   QK      ++   
Sbjct: 81  SDYNCDKSRGKSKSQKDIKCLYCDKPGHIKRECRKFKREQFKRKGEEQK------DDKDI 134

Query: 215 ATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFG 36
           A V  +GD + +  +   C+++A  D+ WV+D+  SFH T  ++FFS+Y  G FG VK G
Sbjct: 135 AAVASNGDTINIVCDDA-CVNLACQDSTWVVDTTTSFHITARRDFFSSYTSGSFGWVKMG 193

Query: 35  NNNKASIVGV 6
           N  K  I+G+
Sbjct: 194 NEAKCEIIGM 203


>dbj|BAT97420.1| hypothetical protein VIGAN_09086300 [Vigna angularis var.
           angularis]
          Length = 378

 Score =  145 bits (365), Expect = 1e-38
 Identities = 83/191 (43%), Positives = 119/191 (62%), Gaps = 7/191 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAES-SQALAVESRGRHKGND-- 384
           S++TLVV+LSNSAPDG L++D + +SL NEE+RR  +G+ S S+A  VE+RGR +     
Sbjct: 150 SWDTLVVTLSNSAPDGKLSLDNITDSLLNEESRRKERGSSSHSEANVVENRGRSENRSKG 209

Query: 383 -RDKGKGGSKSRDPR-KCYYCNKPGHVIKDC--YKRKQDEGDQKKTNQKKVDSDNEEDTS 216
            R+K +G  KSR     C+YC K GH  ++C   KR Q  G              E+ T+
Sbjct: 210 KREKSRGRFKSRSKGLTCFYCGKDGHKKQECRFLKRDQKNGTVHPDMVDPKQKLEEKTTT 269

Query: 215 ATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFG 36
           A V  D +V +++    N L++A  D  W++D+ ASFH TP++ FFS+Y+ GDFGTVK G
Sbjct: 270 AVVSNDENVFLITEV--NYLNIAIDDCTWIVDTGASFHVTPHEGFFSSYQKGDFGTVKMG 327

Query: 35  NNNKASIVGVG 3
           N+  + IVG+G
Sbjct: 328 NHVTSKIVGIG 338


>gb|KYP40135.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 371

 Score =  144 bits (364), Expect = 2e-38
 Identities = 82/191 (42%), Positives = 121/191 (63%), Gaps = 10/191 (5%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESS----QALAVESRGR---- 399
           S+ETLV SLSNSAP+G LT +MVK+S  NEET+R GQG +SS    +AL +ESR R    
Sbjct: 94  SWETLVASLSNSAPNGKLTFNMVKDSFLNEETKRKGQGMDSSLTHNEALIMESRRRSHQR 153

Query: 398 --HKGNDRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEE 225
             H+ +DR K KG S++R   KC++CNK GH++KDC +                  D ++
Sbjct: 154 NSHRYDDRSKSKGRSRTRKDIKCFHCNKMGHLMKDCRE------------------DKDK 195

Query: 224 DTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTV 45
           DT+ T+  +G+VV++ ++  N +++A  +  WVIDSAASF+ T + E+F++Y + DFG V
Sbjct: 196 DTT-TIVSNGEVVIVYND--NSINLALQEYEWVIDSAASFNVTRHYEYFTSYTVSDFGQV 252

Query: 44  KFGNNNKASIV 12
           K  N   + +V
Sbjct: 253 KMVNQGVSKVV 263


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score =  149 bits (377), Expect = 2e-38
 Identities = 80/189 (42%), Positives = 117/189 (61%), Gaps = 5/189 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESSQA--LAVESRGRHKG--- 390
           S+ETL VS++NSAP+G++ M+ VK+ + NEE RR  QG  SSQ+  LAV +RGR +    
Sbjct: 153 SWETLKVSITNSAPNGVVNMETVKSGILNEEMRRRSQGTSSSQSEVLAVTTRGRSQNKSQ 212

Query: 389 NDRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSAT 210
           ++RDK +G S      +C+YC K GH+ + C   +Q + DQKK   KKV  +   D    
Sbjct: 213 SNRDKSRGKSNKFANVECHYCKKKGHIKRFC---RQFQNDQKKNKGKKVKPEESSDDETN 269

Query: 209 VFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNN 30
            F + +VV       + +++ + +  WVIDS A+ HATP +E FS+Y +GDFG VK GN 
Sbjct: 270 SFGEFNVVY----DDDIINLTTQEMTWVIDSGATIHATPRRELFSSYTLGDFGRVKMGNA 325

Query: 29  NKASIVGVG 3
           N +++VG G
Sbjct: 326 NFSTVVGKG 334


>gb|KYP31853.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1314

 Score =  149 bits (375), Expect = 4e-38
 Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 10/194 (5%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESS-QALAVESRGRHKGND-- 384
           S++TL+++LSNSAP+G L++D V +SL NEE+RR  +G  +  +A  +++RGR K  +  
Sbjct: 146 SWDTLIITLSNSAPEGKLSLDSVTDSLLNEESRRRERGLNNQFEANVIDNRGRSKNREKG 205

Query: 383 -RDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEG------DQKKTNQKKVDSDNEE 225
            R K +G SKSR    CYYC KPGH   +C   K+D+       DQ    +KK      E
Sbjct: 206 GRGKSQGRSKSRTRICCYYCGKPGHRKSECRFLKKDQQAGTVHPDQIDPRKKK------E 259

Query: 224 DTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTV 45
           D + T     DV ++  E  N L++A  +  W+IDS ASFH TP++EFFS+Y+ GDFG V
Sbjct: 260 DGTTTAVTSDDVFLVGEE--NYLNIAFDECIWIIDSGASFHVTPHEEFFSSYQKGDFGMV 317

Query: 44  KFGNNNKASIVGVG 3
           K GN+  + IVG+G
Sbjct: 318 KMGNHVTSKIVGIG 331


>gb|PHU21416.1| hypothetical protein BC332_06523 [Capsicum chinense]
          Length = 652

 Score =  147 bits (372), Expect = 5e-38
 Identities = 83/192 (43%), Positives = 115/192 (59%), Gaps = 8/192 (4%)
 Frame = -3

Query: 554  SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESSQA----LAVESRGRHKGN 387
            S+ETL VSL+NS P GI+TM+ VK+ + NEE RR  Q + SS +    L  E RGR+K  
Sbjct: 462  SWETLRVSLTNSTPSGIVTMEYVKSGVLNEEMRRRSQASSSSSSHSDVLVTEERGRNKSR 521

Query: 386  D-RDKGKGGSKSRDPRK---CYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDT 219
            D  D+ K  SKSR   K   C YCNK GH++K CYK K+D   QKK      + DNE   
Sbjct: 522  DSNDRDKSRSKSRSKFKNVTCDYCNKKGHIMKYCYKHKRDIRRQKK------EGDNEN-- 573

Query: 218  SATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKF 39
               V  + D++V   E  N +++   +++W +DS A+ H TP KE  S+Y  G+FG +K 
Sbjct: 574  RVVVVANDDLLVACGE--NAINLVRDESSWFVDSGATSHVTPKKELSSSYTPGNFGMLKM 631

Query: 38   GNNNKASIVGVG 3
            GNN+K  ++G+G
Sbjct: 632  GNNDKVKVLGIG 643


>gb|PRQ60431.1| putative RNA-directed DNA polymerase [Rosa chinensis]
          Length = 1340

 Score =  148 bits (374), Expect = 6e-38
 Identities = 80/189 (42%), Positives = 114/189 (60%), Gaps = 5/189 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESSQALAVESRGRHKGNDRDK 375
           ++ET VV++SNSAPDG+L+MD VKN++ NEETRR    +++SQ    E RGR K     K
Sbjct: 154 NWETFVVTVSNSAPDGVLSMDNVKNNMLNEETRRKSSSSDNSQVFVTEHRGRSKSRG-PK 212

Query: 374 GKGGSKSRDPR----KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATV 207
           G G S SR       KC++C   GH+ K+C K K+D  + +  N  + + D     ++  
Sbjct: 213 GHGRSMSRSRTRFNGKCHHCGIFGHMKKNCNKLKKDPKEGRDGNTHQPNDDTRNTAASVS 272

Query: 206 FPDGDVVVLSSEKHNCLHMAS-SDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNN 30
             + + + L  E   CLH+   S   WV+DS ASFHATP+ E+F+TY+ GDFG VK GN+
Sbjct: 273 HDECEFLCLEGE---CLHVDDCSSVAWVVDSGASFHATPHLEYFTTYQGGDFGRVKMGND 329

Query: 29  NKASIVGVG 3
             + I G+G
Sbjct: 330 GYSKISGIG 338


>ref|XP_016647234.1| PREDICTED: retrovirus-related Pol polyprotein from transposon TNT
           1-94 [Prunus mume]
          Length = 394

 Score =  142 bits (358), Expect = 2e-37
 Identities = 81/196 (41%), Positives = 116/196 (59%), Gaps = 14/196 (7%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQG-AESSQALAVESRGR------- 399
           S++TLVVSLSNSAP G+LT+D+VK+S+FNEE RR  QG    S+AL  E RGR       
Sbjct: 212 SWDTLVVSLSNSAPQGVLTLDIVKDSMFNEEARRKEQGVVAESEALVSEYRGRTNNRKFH 271

Query: 398 ----HKGNDRDKGKGGSKSRDPRKCYYCNKPGHVIKDC--YKRKQDEGDQKKTNQKKVDS 237
                KG  RD  +G SK+R   +CY+C   GH+ ++C  +KR+QD G++K         
Sbjct: 272 RQDKSKGRSRDGLRGRSKTRKDLECYHCGGIGHMKRECRLFKREQDRGNEK--------- 322

Query: 236 DNEEDTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGD 57
           ++   T+AT     +V++L  +    L        W++DS ASFH T  ++FF++Y  GD
Sbjct: 323 NDARHTTATTSGGNEVIILCGDGFVIL-----SRYWIVDSGASFHVTSRRDFFTSYTNGD 377

Query: 56  FGTVKFGNNNKASIVG 9
           FG V+ GN+  + IVG
Sbjct: 378 FGNVRMGNDKLSKIVG 393


>gb|PNX95528.1| putative gag/pol polyprotein [Trifolium pratense]
          Length = 1339

 Score =  146 bits (369), Expect = 3e-37
 Identities = 74/192 (38%), Positives = 116/192 (60%), Gaps = 8/192 (4%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAES-SQALAVESRGR------- 399
           S+ET   SLSNSAP+GI++MD+ K+S+ NEE RR  QG+ S S+ L  ESRGR       
Sbjct: 153 SWETFRTSLSNSAPNGIISMDLAKSSVLNEELRRKSQGSSSHSEVLVTESRGRQQSRGPS 212

Query: 398 HKGNDRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDT 219
           ++G  RDK +GGS      +C++C + G + + C K K++   +   N  K + +N ED 
Sbjct: 213 NRGTSRDKSQGGSNRFSNIECHHCGEKGDIKRFCRKLKRENKKKGYNNNNKKEGNNNEDV 272

Query: 218 SATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKF 39
           +       D  ++       ++++  + +WV+DS AS HAT  ++ FSTY+ GDFG V+ 
Sbjct: 273 AIV----DDFFIVCDNCVENINLSCDEMDWVVDSGASTHATSRRDLFSTYETGDFGVVRM 328

Query: 38  GNNNKASIVGVG 3
           GNN +A+++G+G
Sbjct: 329 GNNGQANVIGIG 340


>gb|KYP60452.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 367

 Score =  138 bits (348), Expect = 4e-36
 Identities = 71/190 (37%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAES-SQALAVESRGRHKGNDRD 378
           S+ET  VS++NSAP+G++++   K+   NEE RR  QG+ S S+ L  E++GR +  +  
Sbjct: 153 SWETFRVSITNSAPNGVVSLQAAKSGALNEEMRRKAQGSSSQSEVLVTENKGRSRKKELK 212

Query: 377 KGKGGSKSRDPRK-----CYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSA 213
            G+  S+S+   K     C+Y +K GH+ ++C+  K+ E   KK  QK+ D D+++  + 
Sbjct: 213 GGREKSRSKSKSKYKNVECHYSHKTGHIQRNCFMWKK-ENRGKKGKQKEKDHDDDDCVAT 271

Query: 212 TVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGN 33
                GD+V+LS   H  +++ S ++ W++DS A+ H TP KEFF++Y  GDFG +K GN
Sbjct: 272 ATC--GDLVILSD--HGSVNLVSDESMWIVDSGATLHVTPWKEFFTSYTSGDFGVLKMGN 327

Query: 32  NNKASIVGVG 3
           +  + ++GVG
Sbjct: 328 DGVSKVIGVG 337


>emb|CAN75440.1| hypothetical protein VITISV_007304 [Vitis vinifera]
          Length = 1362

 Score =  143 bits (360), Expect = 5e-36
 Identities = 79/188 (42%), Positives = 112/188 (59%), Gaps = 4/188 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAES-SQALAVESRGRHKGN--- 387
           S+ET   SLSNSAPDGI+ MD+VK+ + NEE RR  QG+ S S  L +   GR K     
Sbjct: 131 SWETFRTSLSNSAPDGIMNMDLVKSCVLNEEMRRKSQGSSSQSNVLVIXKXGRSKSRGPK 190

Query: 386 DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATV 207
           +RD+ K  +      +C+YC+  GH+ K C + K+D   Q K  +KK D+  E+D  AT 
Sbjct: 191 NRDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDM-KQGKVKEKKNDNGGEDDQVATT 249

Query: 206 FPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNN 27
             D  +V  S    + ++ A  ++ WVID  AS HATP K+FF++Y  GDFG+V+ GN+ 
Sbjct: 250 ISDFLIVYDS----DVVNFACQESXWVIDXGASIHATPQKDFFTSYTSGDFGSVRMGNDG 305

Query: 26  KASIVGVG 3
            A  +G+G
Sbjct: 306 SAKAIGMG 313


>gb|KYP64759.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 369

 Score =  137 bits (345), Expect = 1e-35
 Identities = 76/191 (39%), Positives = 110/191 (57%), Gaps = 7/191 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESSQALAV-------ESRGRH 396
           S++TLVV+LSNSAP+G LTMD V +SL  EE+RRM +G        +       E+RGR 
Sbjct: 146 SWDTLVVTLSNSAPEGKLTMDAVSDSLLGEESRRMERGESIHPEANIIENRGKNETRGRS 205

Query: 395 KGNDRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTS 216
           K  D+ + +G SKSR    CYYC + GH   +C   K+D+  +                 
Sbjct: 206 KSRDQYQSRGRSKSRSKITCYYCGRMGHRKMECRSFKRDQKAE----------------- 248

Query: 215 ATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFG 36
                  D++ +  E  N L++A  D++W++DS ASFH TP+  FFS+Y+ GDFGTV+ G
Sbjct: 249 -------DMLYIIREG-NILNIAYDDSSWIVDSGASFHVTPHGSFFSSYQSGDFGTVQMG 300

Query: 35  NNNKASIVGVG 3
           N +++ IVG+G
Sbjct: 301 NQDRSKIVGIG 311


>gb|KYP44187.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 345

 Score =  136 bits (342), Expect = 2e-35
 Identities = 72/188 (38%), Positives = 118/188 (62%), Gaps = 6/188 (3%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAES-SQALAVESRGRHKGND-- 384
           S+ET  VS++NSAP+G++++   K+   NEE RR  QG+ S S+ L  E+RGR +  +  
Sbjct: 153 SWETFRVSITNSAPNGVVSLQAAKSGALNEEMRRKAQGSSSQSEVLVTENRGRSQKKEPK 212

Query: 383 --RDKGKGGSKSRDPR-KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSA 213
             R K +  SKSR    +C+YC+K G++ ++C+  K+ E   KK  QK+ D DN++  + 
Sbjct: 213 GGRKKSRSKSKSRYKNVECHYCHKTGNIQRNCFLWKK-ENKGKKGKQKEKDHDNDDRVAT 271

Query: 212 TVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGN 33
           T    G++V+LS   H  +++ S ++ W++DS A+ H T  KEFF++Y  GDFG +K GN
Sbjct: 272 TTC--GNLVILSD--HMLVNLVSDESMWIVDSGATLHVTSRKEFFTSYTFGDFGLLKMGN 327

Query: 32  NNKASIVG 9
           +  + ++G
Sbjct: 328 DGVSKVIG 335


>gb|OMO59210.1| Integrase, catalytic core [Corchorus capsularis]
          Length = 855

 Score =  140 bits (354), Expect = 3e-35
 Identities = 74/189 (39%), Positives = 107/189 (56%), Gaps = 5/189 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAESSQALAVESRGRHKGN---- 387
           S++TLVV ++NSAPD  +TM+M  ++  NEE RR  + + SSQALA+E+RGR +      
Sbjct: 4   SWDTLVVMVTNSAPDKKVTMEMANDASLNEEARRTNRESGSSQALAIENRGRSREKVQGF 63

Query: 386 -DRDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSAT 210
             R K K  SKSRDP K  +C K GH+ ++C   KQ+  D K     +     EE     
Sbjct: 64  RGRSKSKNRSKSRDPVKRNHCGKVGHLKRNCKLLKQERKDGKSKKNSE-----EESNVTV 118

Query: 209 VFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNN 30
           V  D + V L     +C H+      W++D+ A++H  P +E F+TYK GDF   + GN 
Sbjct: 119 VVSDEETVSLICGHGDCNHVTDPSNEWIVDTGATYHCVPKRELFTTYKAGDFSETRMGNK 178

Query: 29  NKASIVGVG 3
           + + IVG+G
Sbjct: 179 SVSQIVGIG 187


>emb|CAN66323.1| hypothetical protein VITISV_007384 [Vitis vinifera]
          Length = 1317

 Score =  140 bits (353), Expect = 4e-35
 Identities = 78/187 (41%), Positives = 112/187 (59%), Gaps = 4/187 (2%)
 Frame = -3

Query: 551 FETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAES-SQALAVESRGRHKGN---D 384
           +ET   SLSNSA DGI+ MD+VK+ + NEE RR  QG+ S S  L  E +G+ K     +
Sbjct: 132 WETFRTSLSNSALDGIMNMDLVKSCVLNEEMRRKSQGSSSQSNVLVTEKKGKSKSRGPKN 191

Query: 383 RDKGKGGSKSRDPRKCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSATVF 204
           RD+ K  +      +C+YC+  GH+ K C + K+D   Q K  +KK D+  E+D  AT  
Sbjct: 192 RDRSKSKTNKFANVECHYCHLKGHIKKYCRQLKRDM-KQGKVKEKKNDNGGEDDQVATTT 250

Query: 203 PDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNNNK 24
            D  +V  S    + ++ A  + +WVIDS AS HATP K+FF++Y  GDFG+V+ GN+  
Sbjct: 251 SDFLIVYDS----DVVNFACQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGNDGS 306

Query: 23  ASIVGVG 3
           A  +G+G
Sbjct: 307 AKAIGMG 313


>gb|PKI48613.1| hypothetical protein CRG98_031032 [Punica granatum]
          Length = 435

 Score =  136 bits (342), Expect = 9e-35
 Identities = 76/195 (38%), Positives = 112/195 (57%), Gaps = 11/195 (5%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAE-SSQALAVESRGRHK----- 393
           +++TLVV+LSNSAP+G L++ MV +SLFNEETR+   G    S+AL  E RGR +     
Sbjct: 38  NWDTLVVALSNSAPNGKLSLVMVTDSLFNEETRKKSSGISIRSEALVTEQRGRSQSKNSS 97

Query: 392 ---GNDRDKGKGGSKSRDPR--KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNE 228
              GN  DK +G SKS+  +   CY+  K GH  ++C   K+        NQ       +
Sbjct: 98  SKHGNSGDKSRGRSKSKTRKVVTCYHYGKEGHYKRECRALKK--------NQNGNGESKK 149

Query: 227 EDTSATVFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGT 48
           E+ + TV  DG+  ++  E +  ++    D+ WV D+  SFH TP+++FFS+Y  GD+G 
Sbjct: 150 EEGTTTVASDGETYIVCDEAY--VNFTCQDSTWVADTGVSFHVTPHRDFFSSYTTGDYGY 207

Query: 47  VKFGNNNKASIVGVG 3
           V+ GN     IVG+G
Sbjct: 208 VRMGNGQSCKIVGIG 222


>emb|CAN70827.1| hypothetical protein VITISV_029099 [Vitis vinifera]
          Length = 649

 Score =  138 bits (347), Expect = 1e-34
 Identities = 80/189 (42%), Positives = 112/189 (59%), Gaps = 5/189 (2%)
 Frame = -3

Query: 554 SFETLVVSLSNSAPDGILTMDMVKNSLFNEETRRMGQGAES-SQALAVESRGRHKGNDRD 378
           S+ET   SLS SAPDG + MD+VK+ + NEE RR  QG  S S  L  E RGR K     
Sbjct: 107 SWETFRTSLSISAPDGTMNMDLVKSCVLNEEMRRKLQGPPSQSDVLVTEKRGRSKSRG-P 165

Query: 377 KGKGGSKSRDPR----KCYYCNKPGHVIKDCYKRKQDEGDQKKTNQKKVDSDNEEDTSAT 210
           K K  SKS+  +    +C+YC+  GH+ K C + K++   Q+K   KK D+  E+D  AT
Sbjct: 166 KNKDRSKSKTNKFVNVECHYCHLKGHIRKYCRQLKRNM-KQRKVKNKKNDNSGEDDRVAT 224

Query: 209 VFPDGDVVVLSSEKHNCLHMASSDANWVIDSAASFHATPNKEFFSTYKMGDFGTVKFGNN 30
              D  +V  S    + ++ +  + +WVIDS AS HATP K+FF++Y  GDFG+V+ GN+
Sbjct: 225 TISDFLIVYDS----DVVNFSCQETSWVIDSGASIHATPRKDFFTSYTSGDFGSVRMGND 280

Query: 29  NKASIVGVG 3
             A  +G+G
Sbjct: 281 GSAKAIGMG 289