BLASTX nr result

ID: Rehmannia31_contig00008954 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Rehmannia31_contig00008954
         (912 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygro...    65   2e-08
ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-...    45   3e-06
ref|XP_019171211.1| PREDICTED: uncharacterized protein LOC109166...    45   8e-06

>gb|KZV23276.1| hypothetical protein F511_02177 [Dorcoceras hygrometricum]
          Length = 250

 Score = 65.1 bits (157), Expect = 2e-08
 Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 8/186 (4%)
 Frame = +1

Query: 166 VHFLLYTHVVKYF*L*L-KILFNF-CHLNIQQREDWQDI----PDELASLVDKKVLF*VQ 327
           ++F+  THV + F      ++F+F    N++  E  + +    P E  +LVDKKVLF VQ
Sbjct: 83  INFITKTHVCEIFDDSFPSMMFDFKSFTNVKNAEIDETMLFGEPTEFGNLVDKKVLFKVQ 142

Query: 328 VKANQVKHFSGAFSVMRLTADPNLIRQYSNLAIESQVLFYIDLFC**FY*IIKCLIHIN* 507
           V+ +Q++ F+G ++V++L  D N++ ++     ESQ                        
Sbjct: 143 VRQDQIRGFNGLYTVVKLNTDHNMVEKFCGETFESQ------------------------ 178

Query: 508 YXXXXXXXXXXESDFLSKLQEENKNQVKDGNSSGDEVSTPNKVVKRLDAVAEG--SSVKR 681
                      ESD LSKL        K+  SS DEVSTP K  K  +  ++G  +  KR
Sbjct: 179 -----------ESDVLSKLNISEAGDFKEVISSEDEVSTPVKSTKN-EENSKGIMNETKR 226

Query: 682 KLLEEF 699
            L +EF
Sbjct: 227 ALTDEF 232


>ref|XP_009787046.1| PREDICTED: replication protein A 70 kDa DNA-binding subunit C-like,
           partial [Nicotiana sylvestris]
          Length = 244

 Score = 44.7 bits (104), Expect(2) = 3e-06
 Identities = 22/49 (44%), Positives = 35/49 (71%)
 Frame = +1

Query: 277 PDELASLVDKKVLF*VQVKANQVKHFSGAFSVMRLTADPNLIRQYSNLA 423
           P EL  ++DKKVLF V VK++ +K  +  ++V++++ D NLI+QYS  A
Sbjct: 121 PVELYDILDKKVLFKVTVKSSIIKVHAEVYNVVKISEDDNLIQQYSQPA 169



 Score = 35.8 bits (81), Expect(2) = 3e-06
 Identities = 18/51 (35%), Positives = 29/51 (56%), Gaps = 6/51 (11%)
 Frame = +3

Query: 39  RYRIQIEVGDDSANTSLLCWDRECELLIGKPC------SVLKAELSDVCAF 173
           RY+ +++V D +   SLL WDRE   LIGK        S+  + ++D C++
Sbjct: 70  RYKFRVQVMDHTGFISLLLWDREATSLIGKSANELNEISIETSAVADECSY 120


>ref|XP_019171211.1| PREDICTED: uncharacterized protein LOC109166778 [Ipomoea nil]
          Length = 471

 Score = 45.4 bits (106), Expect(2) = 8e-06
 Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 7/157 (4%)
 Frame = +1

Query: 271 DIPDELASLVDKKVLF*VQVKANQVKHFSGAFSVMRLTADPNLIRQYSNLAIESQVLFYI 450
           DIP EL +L+   ++F + +K N ++  + +++VMRL  D  L+  Y +   ++Q     
Sbjct: 335 DIPKELETLIGMSMIFKITLKINLMRGANPSYTVMRLLRDELLVSTYCSKLKDNQ----- 389

Query: 451 DLFC**FY*IIKCLIHIN*YXXXXXXXXXXESDFLSKL----QEENKNQVKDGNSSGDEV 618
                                         E D +SK+    +EE+    ++ ++  +EV
Sbjct: 390 ------------------------------EKDLISKMIDEDEEEDDESDQEASNGDNEV 419

Query: 619 STPNKVVKRLDAVA---EGSSVKRKLLEEFLSSNNMK 720
           + P  V +    VA   + + VKR LL+EF SS  ++
Sbjct: 420 NNPISVQQTQSPVADLEDCTVVKRSLLDEFSSSGKVE 456



 Score = 33.5 bits (75), Expect(2) = 8e-06
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = +3

Query: 39  RYRIQIEVGDDS-ANTSLLCWDRECELLIGKPCSVLKAELSDV 164
           RYR+ + V D   ++   L WDREC  L+G P ++L  + + V
Sbjct: 291 RYRVIVRVMDQGLSDAPFLLWDRECSDLVGIPANLLYKKYNKV 333


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